Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_08490 and OH686_08495 overlap by 4 nucleotides OH686_08495 and OH686_08500 overlap by 4 nucleotides OH686_08500 and OH686_08505 overlap by 1 nucleotides OH686_08505 and OH686_08510 overlap by 1 nucleotides
OH686_08490: OH686_08490 - Phospholipid ABC transporter-binding protein MlaB, at 1,728,660 to 1,728,968
_08490
OH686_08495: OH686_08495 - Phospholipid ABC transporter shuttle protein MlaC, at 1,728,965 to 1,729,618
_08495
OH686_08500: OH686_08500 - outer membrane lipid asymmetry maintenance protein MlaD, at 1,729,615 to 1,730,082
_08500
OH686_08505: OH686_08505 - Phospholipid ABC transporter permease protein MlaE, at 1,730,082 to 1,730,879
_08505
OH686_08510: OH686_08510 - Phospholipid ABC transporter ATP-binding protein MlaF, at 1,730,879 to 1,731,688
_08510
Position (kb)
1729
1730
1731 Strain fitness (log2 ratio)
-1
0
1 at 1728.640 kb on + strand at 1728.641 kb on - strand at 1728.653 kb on + strand at 1728.653 kb on + strand at 1728.654 kb on - strand at 1728.654 kb on - strand at 1728.654 kb on - strand at 1728.654 kb on - strand at 1728.661 kb on + strand at 1728.661 kb on + strand at 1728.661 kb on + strand at 1728.662 kb on - strand at 1728.662 kb on - strand at 1728.904 kb on + strand, within OH686_08490 at 1729.072 kb on + strand, within OH686_08495 at 1729.072 kb on + strand, within OH686_08495 at 1729.072 kb on + strand, within OH686_08495 at 1729.072 kb on + strand, within OH686_08495 at 1729.072 kb on + strand, within OH686_08495 at 1729.073 kb on - strand, within OH686_08495 at 1729.073 kb on - strand, within OH686_08495 at 1729.073 kb on - strand, within OH686_08495 at 1729.170 kb on + strand, within OH686_08495 at 1729.278 kb on + strand, within OH686_08495 at 1729.279 kb on - strand, within OH686_08495 at 1729.300 kb on - strand, within OH686_08495 at 1729.371 kb on + strand, within OH686_08495 at 1729.372 kb on - strand, within OH686_08495 at 1729.372 kb on - strand, within OH686_08495 at 1729.429 kb on + strand, within OH686_08495 at 1729.430 kb on - strand, within OH686_08495 at 1729.446 kb on + strand, within OH686_08495 at 1729.446 kb on + strand, within OH686_08495 at 1729.629 kb on + strand at 1729.751 kb on + strand, within OH686_08500 at 1729.751 kb on + strand, within OH686_08500 at 1729.752 kb on - strand, within OH686_08500 at 1729.752 kb on - strand, within OH686_08500 at 1729.752 kb on - strand, within OH686_08500 at 1729.752 kb on - strand, within OH686_08500 at 1729.850 kb on + strand, within OH686_08500 at 1729.850 kb on + strand, within OH686_08500 at 1729.850 kb on + strand, within OH686_08500 at 1729.851 kb on - strand, within OH686_08500 at 1729.964 kb on + strand, within OH686_08500 at 1729.964 kb on + strand, within OH686_08500 at 1729.964 kb on + strand, within OH686_08500 at 1729.964 kb on + strand, within OH686_08500 at 1730.114 kb on + strand at 1730.146 kb on + strand at 1730.146 kb on + strand at 1730.146 kb on + strand at 1730.146 kb on + strand at 1730.146 kb on + strand at 1730.146 kb on + strand at 1730.326 kb on + strand, within OH686_08505 at 1730.326 kb on + strand, within OH686_08505 at 1730.326 kb on + strand, within OH686_08505 at 1730.326 kb on + strand, within OH686_08505 at 1730.443 kb on + strand, within OH686_08505 at 1730.443 kb on + strand, within OH686_08505 at 1730.443 kb on + strand, within OH686_08505 at 1730.444 kb on - strand, within OH686_08505 at 1730.642 kb on + strand, within OH686_08505 at 1730.642 kb on + strand, within OH686_08505 at 1730.644 kb on + strand, within OH686_08505 at 1730.873 kb on + strand at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.043 kb on - strand, within OH686_08510 at 1731.043 kb on - strand, within OH686_08510 at 1731.043 kb on - strand, within OH686_08510 at 1731.043 kb on - strand, within OH686_08510 at 1731.043 kb on - strand, within OH686_08510 at 1731.049 kb on - strand, within OH686_08510 at 1731.049 kb on - strand, within OH686_08510
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 1,728,640 + -0.5 1,728,641 - +0.2 1,728,653 + +0.1 1,728,653 + +0.2 1,728,654 - +0.8 1,728,654 - -0.1 1,728,654 - -0.3 1,728,654 - -0.3 1,728,661 + +0.0 1,728,661 + +0.2 1,728,661 + +0.7 1,728,662 - +0.6 1,728,662 - -0.6 1,728,904 + OH686_08490 0.79 -0.4 1,729,072 + OH686_08495 0.16 -0.7 1,729,072 + OH686_08495 0.16 -0.4 1,729,072 + OH686_08495 0.16 -0.4 1,729,072 + OH686_08495 0.16 -0.4 1,729,072 + OH686_08495 0.16 -0.1 1,729,073 - OH686_08495 0.17 -0.4 1,729,073 - OH686_08495 0.17 -0.1 1,729,073 - OH686_08495 0.17 -0.1 1,729,170 + OH686_08495 0.31 -0.7 1,729,278 + OH686_08495 0.48 -0.1 1,729,279 - OH686_08495 0.48 -0.4 1,729,300 - OH686_08495 0.51 -0.1 1,729,371 + OH686_08495 0.62 -0.4 1,729,372 - OH686_08495 0.62 -0.9 1,729,372 - OH686_08495 0.62 -0.7 1,729,429 + OH686_08495 0.71 -0.7 1,729,430 - OH686_08495 0.71 -0.1 1,729,446 + OH686_08495 0.74 +0.6 1,729,446 + OH686_08495 0.74 -0.7 1,729,629 + -0.1 1,729,751 + OH686_08500 0.29 -0.1 1,729,751 + OH686_08500 0.29 -0.1 1,729,752 - OH686_08500 0.29 -0.7 1,729,752 - OH686_08500 0.29 -0.1 1,729,752 - OH686_08500 0.29 -0.1 1,729,752 - OH686_08500 0.29 -1.7 1,729,850 + OH686_08500 0.50 -0.1 1,729,850 + OH686_08500 0.50 -0.4 1,729,850 + OH686_08500 0.50 -1.4 1,729,851 - OH686_08500 0.50 -0.1 1,729,964 + OH686_08500 0.75 -0.4 1,729,964 + OH686_08500 0.75 -0.1 1,729,964 + OH686_08500 0.75 -0.9 1,729,964 + OH686_08500 0.75 -0.1 1,730,114 + -0.1 1,730,146 + -0.4 1,730,146 + -0.4 1,730,146 + -0.1 1,730,146 + -0.4 1,730,146 + +1.2 1,730,146 + -0.4 1,730,326 + OH686_08505 0.31 -0.7 1,730,326 + OH686_08505 0.31 -0.7 1,730,326 + OH686_08505 0.31 -0.1 1,730,326 + OH686_08505 0.31 -0.1 1,730,443 + OH686_08505 0.45 -0.4 1,730,443 + OH686_08505 0.45 -0.4 1,730,443 + OH686_08505 0.45 -0.4 1,730,444 - OH686_08505 0.45 -0.1 1,730,642 + OH686_08505 0.70 -1.1 1,730,642 + OH686_08505 0.70 -0.4 1,730,644 + OH686_08505 0.70 -0.1 1,730,873 + -0.4 1,731,042 + OH686_08510 0.20 -0.1 1,731,042 + OH686_08510 0.20 -0.1 1,731,042 + OH686_08510 0.20 -0.1 1,731,042 + OH686_08510 0.20 -0.1 1,731,042 + OH686_08510 0.20 -0.1 1,731,042 + OH686_08510 0.20 -0.4 1,731,042 + OH686_08510 0.20 -0.1 1,731,042 + OH686_08510 0.20 -0.9 1,731,042 + OH686_08510 0.20 -0.1 1,731,042 + OH686_08510 0.20 -1.1 1,731,042 + OH686_08510 0.20 -0.4 1,731,042 + OH686_08510 0.20 -1.1 1,731,042 + OH686_08510 0.20 -0.1 1,731,043 - OH686_08510 0.20 -0.4 1,731,043 - OH686_08510 0.20 -0.9 1,731,043 - OH686_08510 0.20 -0.1 1,731,043 - OH686_08510 0.20 -0.1 1,731,043 - OH686_08510 0.20 -0.1 1,731,049 - OH686_08510 0.21 -0.1 1,731,049 - OH686_08510 0.21 -0.7
Or see this region's nucleotide sequence