Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_02245 and OH686_02250 are separated by 154 nucleotides OH686_02250 and OH686_02255 are separated by 78 nucleotides
OH686_02245: OH686_02245 - Fumarate and nitrate reduction regulatory protein, at 481,784 to 482,518
_02245
OH686_02250: OH686_02250 - adenine phosphoribosyltransferase, at 482,673 to 483,221
_02250
OH686_02255: OH686_02255 - hypothetical protein, at 483,300 to 486,074
_02255
Position (kb) 482
483
484 Strain fitness (log2 ratio) -2
-1
0
1
2 at 481.688 kb on + strand at 481.688 kb on + strand at 481.688 kb on + strand at 481.688 kb on + strand at 481.688 kb on + strand at 481.688 kb on + strand at 481.688 kb on + strand at 481.689 kb on - strand at 481.689 kb on - strand at 481.689 kb on - strand at 481.692 kb on + strand at 481.692 kb on + strand at 481.692 kb on + strand at 481.692 kb on + strand at 481.692 kb on + strand at 481.692 kb on + strand at 481.692 kb on + strand at 481.692 kb on + strand at 481.692 kb on + strand at 481.692 kb on + strand at 481.692 kb on + strand at 481.692 kb on + strand at 481.692 kb on + strand at 481.692 kb on + strand at 481.692 kb on + strand at 481.693 kb on - strand at 481.693 kb on - strand at 481.693 kb on - strand at 481.693 kb on - strand at 481.693 kb on - strand at 481.693 kb on - strand at 481.693 kb on - strand at 481.693 kb on - strand at 481.743 kb on - strand at 481.803 kb on + strand at 481.803 kb on + strand at 481.803 kb on + strand at 481.803 kb on + strand at 481.803 kb on + strand at 481.803 kb on + strand at 481.803 kb on + strand at 481.804 kb on - strand at 481.804 kb on - strand at 481.804 kb on - strand at 481.804 kb on - strand at 481.804 kb on - strand at 481.804 kb on - strand at 481.958 kb on - strand, within OH686_02245 at 481.958 kb on - strand, within OH686_02245 at 482.375 kb on + strand, within OH686_02245 at 482.375 kb on + strand, within OH686_02245 at 482.375 kb on + strand, within OH686_02245 at 482.375 kb on + strand, within OH686_02245 at 482.375 kb on + strand, within OH686_02245 at 482.375 kb on + strand, within OH686_02245 at 482.375 kb on + strand, within OH686_02245 at 482.375 kb on + strand, within OH686_02245 at 482.375 kb on + strand, within OH686_02245 at 482.375 kb on + strand, within OH686_02245 at 482.375 kb on + strand, within OH686_02245 at 482.375 kb on + strand, within OH686_02245 at 482.375 kb on + strand, within OH686_02245 at 482.375 kb on + strand, within OH686_02245 at 482.376 kb on - strand, within OH686_02245 at 482.376 kb on - strand, within OH686_02245 at 482.376 kb on - strand, within OH686_02245 at 482.376 kb on - strand, within OH686_02245 at 482.376 kb on - strand, within OH686_02245 at 482.376 kb on - strand, within OH686_02245 at 482.376 kb on - strand, within OH686_02245 at 482.376 kb on - strand, within OH686_02245 at 482.460 kb on + strand at 482.460 kb on + strand at 482.460 kb on + strand at 482.460 kb on + strand at 482.460 kb on + strand at 482.461 kb on - strand at 482.461 kb on - strand at 482.461 kb on - strand at 482.461 kb on - strand at 482.461 kb on - strand at 482.461 kb on - strand at 482.461 kb on - strand at 482.461 kb on - strand at 482.506 kb on + strand at 482.506 kb on + strand at 482.506 kb on + strand at 482.506 kb on + strand at 482.506 kb on + strand at 482.506 kb on + strand at 482.507 kb on - strand at 482.507 kb on - strand at 482.507 kb on - strand at 482.507 kb on - strand at 482.507 kb on - strand at 482.507 kb on - strand at 482.559 kb on + strand at 482.584 kb on + strand at 482.584 kb on + strand at 482.584 kb on + strand at 482.584 kb on + strand at 482.584 kb on + strand at 482.584 kb on + strand at 482.584 kb on + strand at 482.585 kb on - strand at 482.585 kb on - strand at 482.585 kb on - strand at 482.585 kb on - strand at 482.585 kb on - strand at 482.585 kb on - strand at 482.585 kb on - strand at 482.593 kb on + strand at 482.594 kb on - strand at 482.594 kb on - strand at 482.594 kb on - strand at 482.633 kb on + strand at 482.633 kb on + strand at 482.634 kb on - strand at 482.817 kb on + strand, within OH686_02250 at 482.889 kb on + strand, within OH686_02250 at 482.889 kb on + strand, within OH686_02250 at 482.890 kb on - strand, within OH686_02250 at 482.961 kb on + strand, within OH686_02250 at 482.961 kb on + strand, within OH686_02250 at 482.961 kb on + strand, within OH686_02250 at 482.961 kb on + strand, within OH686_02250 at 482.962 kb on - strand, within OH686_02250 at 482.962 kb on - strand, within OH686_02250 at 482.962 kb on - strand, within OH686_02250 at 482.973 kb on + strand, within OH686_02250 at 482.974 kb on - strand, within OH686_02250 at 482.995 kb on + strand, within OH686_02250 at 482.995 kb on + strand, within OH686_02250 at 482.995 kb on + strand, within OH686_02250 at 482.996 kb on - strand, within OH686_02250 at 482.996 kb on - strand, within OH686_02250 at 482.996 kb on - strand, within OH686_02250 at 483.249 kb on + strand at 483.250 kb on - strand at 483.250 kb on - strand at 483.250 kb on - strand at 483.269 kb on + strand at 483.289 kb on + strand at 483.289 kb on + strand at 483.289 kb on + strand at 483.289 kb on + strand at 483.289 kb on + strand at 483.289 kb on + strand at 483.289 kb on + strand at 483.289 kb on + strand at 483.289 kb on + strand at 483.289 kb on + strand at 483.289 kb on + strand at 483.290 kb on - strand at 483.290 kb on - strand at 483.290 kb on - strand at 483.290 kb on - strand at 483.290 kb on - strand at 483.290 kb on - strand at 483.290 kb on - strand at 483.290 kb on - strand at 483.290 kb on - strand at 483.290 kb on - strand at 483.290 kb on - strand at 483.290 kb on - strand at 483.290 kb on - strand at 483.290 kb on - strand at 483.290 kb on - strand at 483.290 kb on - strand at 483.290 kb on - strand at 483.291 kb on + strand at 483.291 kb on + strand at 483.291 kb on + strand at 483.291 kb on + strand at 483.291 kb on + strand at 483.291 kb on + strand at 483.292 kb on - strand at 483.292 kb on - strand at 483.371 kb on + strand at 483.371 kb on + strand at 483.372 kb on - strand at 483.543 kb on + strand at 483.543 kb on + strand at 483.543 kb on + strand at 483.543 kb on + strand at 483.543 kb on + strand at 483.543 kb on + strand at 483.543 kb on + strand at 483.543 kb on + strand at 483.543 kb on + strand at 483.543 kb on + strand at 483.544 kb on - strand at 483.544 kb on - strand at 483.544 kb on - strand at 483.790 kb on - strand, within OH686_02255 at 484.055 kb on - strand, within OH686_02255 at 484.103 kb on + strand, within OH686_02255 at 484.147 kb on + strand, within OH686_02255 at 484.148 kb on - strand, within OH686_02255 at 484.148 kb on - strand, within OH686_02255
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 481,688 + -0.1 481,688 + +0.1 481,688 + +0.2 481,688 + +0.4 481,688 + -0.8 481,688 + +0.2 481,688 + +0.0 481,689 - -0.1 481,689 - +0.9 481,689 - -0.5 481,692 + -0.8 481,692 + -0.7 481,692 + +0.2 481,692 + -0.3 481,692 + +0.3 481,692 + -0.4 481,692 + -1.4 481,692 + +1.2 481,692 + +0.3 481,692 + -0.9 481,692 + +0.9 481,692 + -1.3 481,692 + -0.7 481,692 + +0.5 481,692 + +0.1 481,693 - -0.8 481,693 - -0.9 481,693 - -0.4 481,693 - -0.4 481,693 - +0.1 481,693 - +0.2 481,693 - +0.7 481,693 - -1.0 481,743 - -0.7 481,803 + +0.2 481,803 + -0.1 481,803 + +1.0 481,803 + +0.9 481,803 + -0.0 481,803 + -0.5 481,803 + -2.3 481,804 - +0.3 481,804 - -0.3 481,804 - +0.3 481,804 - +1.6 481,804 - -0.2 481,804 - +0.6 481,958 - OH686_02245 0.24 -0.5 481,958 - OH686_02245 0.24 -0.1 482,375 + OH686_02245 0.80 -0.1 482,375 + OH686_02245 0.80 +0.5 482,375 + OH686_02245 0.80 -0.3 482,375 + OH686_02245 0.80 +0.2 482,375 + OH686_02245 0.80 +1.3 482,375 + OH686_02245 0.80 +0.7 482,375 + OH686_02245 0.80 -1.7 482,375 + OH686_02245 0.80 -0.2 482,375 + OH686_02245 0.80 +1.2 482,375 + OH686_02245 0.80 -0.5 482,375 + OH686_02245 0.80 -1.1 482,375 + OH686_02245 0.80 -1.9 482,375 + OH686_02245 0.80 -0.7 482,375 + OH686_02245 0.80 +0.5 482,376 - OH686_02245 0.81 -0.3 482,376 - OH686_02245 0.81 -1.6 482,376 - OH686_02245 0.81 +0.6 482,376 - OH686_02245 0.81 -0.5 482,376 - OH686_02245 0.81 +1.6 482,376 - OH686_02245 0.81 +0.2 482,376 - OH686_02245 0.81 -0.0 482,376 - OH686_02245 0.81 +1.1 482,460 + +0.4 482,460 + -1.3 482,460 + -1.1 482,460 + +0.5 482,460 + -0.6 482,461 - -0.6 482,461 - -1.3 482,461 - -0.9 482,461 - -0.2 482,461 - +0.0 482,461 - +0.9 482,461 - -0.1 482,461 - +0.5 482,506 + -0.4 482,506 + -0.3 482,506 + -1.3 482,506 + +1.2 482,506 + +0.2 482,506 + +0.0 482,507 - +0.2 482,507 - +0.2 482,507 - -0.3 482,507 - +0.4 482,507 - -0.7 482,507 - -0.6 482,559 + -0.1 482,584 + +0.5 482,584 + +0.2 482,584 + +0.3 482,584 + +0.3 482,584 + +0.2 482,584 + +1.2 482,584 + -2.0 482,585 - -0.1 482,585 - -0.3 482,585 - +0.8 482,585 - +0.2 482,585 - +0.3 482,585 - +0.1 482,585 - -0.1 482,593 + -0.7 482,594 - +0.1 482,594 - +0.6 482,594 - -1.2 482,633 + -0.3 482,633 + +0.2 482,634 - +0.0 482,817 + OH686_02250 0.26 +0.7 482,889 + OH686_02250 0.39 +0.4 482,889 + OH686_02250 0.39 +1.2 482,890 - OH686_02250 0.40 +1.3 482,961 + OH686_02250 0.52 +0.2 482,961 + OH686_02250 0.52 +0.8 482,961 + OH686_02250 0.52 +0.3 482,961 + OH686_02250 0.52 +0.7 482,962 - OH686_02250 0.53 +0.1 482,962 - OH686_02250 0.53 +0.2 482,962 - OH686_02250 0.53 -0.4 482,973 + OH686_02250 0.55 -0.7 482,974 - OH686_02250 0.55 -0.0 482,995 + OH686_02250 0.59 -0.0 482,995 + OH686_02250 0.59 -0.7 482,995 + OH686_02250 0.59 +0.0 482,996 - OH686_02250 0.59 -0.8 482,996 - OH686_02250 0.59 -0.2 482,996 - OH686_02250 0.59 +0.1 483,249 + -0.4 483,250 - -0.7 483,250 - +0.4 483,250 - -0.6 483,269 + -0.1 483,289 + +0.7 483,289 + -0.5 483,289 + +0.3 483,289 + +1.2 483,289 + +0.0 483,289 + -0.9 483,289 + -1.0 483,289 + -1.0 483,289 + +0.5 483,289 + +0.5 483,289 + -0.4 483,290 - +0.1 483,290 - +0.2 483,290 - +0.3 483,290 - -1.8 483,290 - -0.4 483,290 - +0.3 483,290 - -0.3 483,290 - -0.6 483,290 - +0.3 483,290 - +0.7 483,290 - -0.4 483,290 - -0.0 483,290 - +0.0 483,290 - +0.3 483,290 - -0.3 483,290 - +1.2 483,290 - -0.4 483,291 + +0.3 483,291 + +0.1 483,291 + +0.4 483,291 + -0.2 483,291 + +0.3 483,291 + +0.4 483,292 - -1.3 483,292 - +0.3 483,371 + -0.5 483,371 + -0.5 483,372 - +0.8 483,543 + +0.7 483,543 + -0.3 483,543 + +0.2 483,543 + -0.5 483,543 + -0.4 483,543 + +0.4 483,543 + +0.2 483,543 + +0.8 483,543 + +0.3 483,543 + -0.5 483,544 - +0.1 483,544 - -0.0 483,544 - +1.2 483,790 - OH686_02255 0.18 +0.0 484,055 - OH686_02255 0.27 +0.6 484,103 + OH686_02255 0.29 +0.2 484,147 + OH686_02255 0.31 +0.2 484,148 - OH686_02255 0.31 +1.9 484,148 - OH686_02255 0.31 +0.0
Or see this region's nucleotide sequence