Strain Fitness in Bosea sp. OAE506 around ABIE41_RS06750

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
1,382,226	+				-1.8
1,382,226	+				-0.0
1,382,226	+				-0.4
1,382,227	-				-1.6
1,382,227	-				+1.1
1,382,227	-				-0.6
1,382,227	-				-1.5
1,382,227	-				+0.0
1,382,247	-				-2.9
1,382,247	-				-1.5
1,382,261	+				-0.9
1,382,264	-				+0.5
1,382,318	+		ABIE41_RS06740	0.19	+1.2
1,382,359	+		ABIE41_RS06740	0.32	+0.5
1,382,370	+		ABIE41_RS06740	0.36	+0.3
1,382,440	+		ABIE41_RS06740	0.58	+2.3
1,382,526	+		ABIE41_RS06740	0.85	+0.2
1,382,527	-		ABIE41_RS06740	0.85	-1.4
1,382,548	-				+2.0
1,382,603	+				+1.4
1,382,713	+				-1.5
1,382,714	-				-3.2
1,382,714	-				+0.5
1,382,739	+				+0.3
1,382,740	-				+0.3
1,382,761	+				+1.5
1,382,761	+				+1.0
1,382,762	-				-1.0
1,382,825	+		ABIE41_RS06745	0.17	-0.5
1,382,826	-		ABIE41_RS06745	0.17	+0.2
1,382,847	+		ABIE41_RS06745	0.27	-0.3
1,382,938	+		ABIE41_RS06745	0.68	-0.8
1,382,938	+		ABIE41_RS06745	0.68	+0.4
1,382,938	+		ABIE41_RS06745	0.68	-0.3
1,382,948	-		ABIE41_RS06745	0.73	-2.2
1,382,948	-		ABIE41_RS06745	0.73	-1.7
1,383,021	+				+0.3
1,383,021	+				+0.9
1,383,021	+				-0.4
1,383,021	+				+0.3
1,383,022	-				+0.4
1,383,033	+				+3.0
1,383,033	+				+1.9
1,383,034	-				+0.4
1,383,034	-				-0.2
1,383,034	-				-1.9
1,383,034	-				-1.6
1,383,034	-				-0.2
1,383,076	+				-1.9
1,383,077	-				-0.5
1,383,087	+				+0.8
1,383,102	+				-0.7
1,383,102	+				+0.7
1,383,103	-				+1.8
1,383,189	+				+0.4
1,383,189	+				+0.1
1,383,189	+				+0.3
1,383,189	+				+0.0
1,383,189	+				-0.3
1,383,189	+				-1.0
1,383,190	-				-0.3
1,383,190	-				+0.6
1,383,190	-				+0.0
1,383,294	-				+0.5
1,383,425	+				-2.7
1,383,425	+				-0.3
1,383,425	+				-1.1
1,383,425	+				-0.1
1,383,425	+				+1.3
1,383,425	+				-0.1
1,383,425	+				-0.3
1,383,425	+				+1.3
1,383,426	-				-0.5
1,383,426	-				+0.2
1,383,426	-				-1.8
1,383,426	-				-0.0
1,383,627	+		ABIE41_RS06750	0.15	-0.9
1,383,627	+		ABIE41_RS06750	0.15	-2.7
1,383,627	+		ABIE41_RS06750	0.15	-0.3
1,383,627	+		ABIE41_RS06750	0.15	+1.3
1,383,627	+		ABIE41_RS06750	0.15	-1.1
1,383,627	+		ABIE41_RS06750	0.15	-0.2
1,383,627	+		ABIE41_RS06750	0.15	-0.7
1,383,627	+		ABIE41_RS06750	0.15	+0.4
1,383,627	+		ABIE41_RS06750	0.15	+0.7
1,383,627	+		ABIE41_RS06750	0.15	-1.7
1,383,627	+		ABIE41_RS06750	0.15	+0.0
1,383,627	+		ABIE41_RS06750	0.15	+1.2
1,383,628	-		ABIE41_RS06750	0.15	+0.0
1,383,628	-		ABIE41_RS06750	0.15	+0.1
1,383,628	-		ABIE41_RS06750	0.15	-2.4
1,383,628	-		ABIE41_RS06750	0.15	-0.8
1,383,628	-		ABIE41_RS06750	0.15	-0.1
1,383,630	+		ABIE41_RS06750	0.16	-2.6
1,383,630	+		ABIE41_RS06750	0.16	-1.7
1,383,630	+		ABIE41_RS06750	0.16	-1.2
1,383,630	+		ABIE41_RS06750	0.16	+1.1
1,383,630	+		ABIE41_RS06750	0.16	+0.6
1,383,630	+		ABIE41_RS06750	0.16	-1.1
1,383,630	+		ABIE41_RS06750	0.16	-0.3
1,383,630	+		ABIE41_RS06750	0.16	+0.1
1,383,630	+		ABIE41_RS06750	0.16	+1.4
1,383,630	+		ABIE41_RS06750	0.16	+0.2
1,383,631	-		ABIE41_RS06750	0.16	-0.3
1,383,631	-		ABIE41_RS06750	0.16	+0.4
1,383,631	-		ABIE41_RS06750	0.16	-2.5
1,383,631	-		ABIE41_RS06750	0.16	+0.6
1,383,631	-		ABIE41_RS06750	0.16	-2.1
1,383,631	-		ABIE41_RS06750	0.16	+0.6
1,383,699	+		ABIE41_RS06750	0.18	+1.7
1,383,699	+		ABIE41_RS06750	0.18	+0.4
1,383,699	+		ABIE41_RS06750	0.18	-2.4
1,383,699	+		ABIE41_RS06750	0.18	+2.0
1,383,699	+		ABIE41_RS06750	0.18	+0.5
1,383,700	-		ABIE41_RS06750	0.18	+0.2
1,383,700	-		ABIE41_RS06750	0.18	+0.9
1,383,700	-		ABIE41_RS06750	0.18	+0.7
1,383,700	-		ABIE41_RS06750	0.18	+1.0
1,383,700	-		ABIE41_RS06750	0.18	-0.1
1,383,700	-		ABIE41_RS06750	0.18	+0.1
1,383,700	-		ABIE41_RS06750	0.18	+0.1
1,383,744	+		ABIE41_RS06750	0.20	+0.7
1,383,745	-		ABIE41_RS06750	0.20	+0.4
1,383,745	-		ABIE41_RS06750	0.20	+0.7
1,383,745	-		ABIE41_RS06750	0.20	-3.1
1,383,780	-		ABIE41_RS06750	0.21	-0.2
1,383,825	-		ABIE41_RS06750	0.23	+0.3
1,383,825	-		ABIE41_RS06750	0.23	-1.9
1,383,905	+		ABIE41_RS06750	0.26	+0.1
1,383,905	+		ABIE41_RS06750	0.26	-2.1
1,383,906	-		ABIE41_RS06750	0.26	+0.3
1,383,906	-		ABIE41_RS06750	0.26	-0.4
1,383,906	-		ABIE41_RS06750	0.26	-0.7
1,383,906	-		ABIE41_RS06750	0.26	-1.2
1,383,906	-		ABIE41_RS06750	0.26	-1.0
1,384,063	+		ABIE41_RS06750	0.32	-0.5
1,384,108	+		ABIE41_RS06750	0.33	+0.1
1,384,108	+		ABIE41_RS06750	0.33	+0.5
1,384,108	+		ABIE41_RS06750	0.33	+0.9
1,384,109	-		ABIE41_RS06750	0.33	-1.3
1,384,109	-		ABIE41_RS06750	0.33	-0.4
1,384,109	-		ABIE41_RS06750	0.33	+0.3
1,384,109	-		ABIE41_RS06750	0.33	-0.1
1,384,109	-		ABIE41_RS06750	0.33	-1.6
1,384,476	+		ABIE41_RS06750	0.47	-0.1
1,384,476	+		ABIE41_RS06750	0.47	-0.1
1,384,477	-		ABIE41_RS06750	0.47	+0.7
1,384,477	-		ABIE41_RS06750	0.47	-0.6
1,384,477	-		ABIE41_RS06750	0.47	-1.2
1,384,477	-		ABIE41_RS06750	0.47	+0.3
1,384,477	-		ABIE41_RS06750	0.47	-0.1
1,384,584	+		ABIE41_RS06750	0.51	+0.3
1,384,584	+		ABIE41_RS06750	0.51	+0.7
1,384,584	+		ABIE41_RS06750	0.51	+2.2
1,384,584	+		ABIE41_RS06750	0.51	-0.9
1,384,584	+		ABIE41_RS06750	0.51	+1.0
1,384,584	+		ABIE41_RS06750	0.51	-2.5
1,384,584	+		ABIE41_RS06750	0.51	+1.0
1,384,584	+		ABIE41_RS06750	0.51	-0.8
1,384,585	-		ABIE41_RS06750	0.51	+1.1
1,384,585	-		ABIE41_RS06750	0.51	-2.1
1,384,585	-		ABIE41_RS06750	0.51	+0.9
1,384,585	-		ABIE41_RS06750	0.51	-0.1
1,384,585	-		ABIE41_RS06750	0.51	+0.1
1,384,589	-		ABIE41_RS06750	0.51	-1.2
1,384,850	+		ABIE41_RS06750	0.61	+0.2
1,384,850	+		ABIE41_RS06750	0.61	-0.7
1,384,850	+		ABIE41_RS06750	0.61	-3.0
1,384,850	+		ABIE41_RS06750	0.61	-0.4
1,384,850	+		ABIE41_RS06750	0.61	-0.5
1,384,850	+		ABIE41_RS06750	0.61	-0.6
1,384,850	+		ABIE41_RS06750	0.61	+0.6
1,384,851	-		ABIE41_RS06750	0.61	+0.4
1,384,851	-		ABIE41_RS06750	0.61	+1.0
1,384,851	-		ABIE41_RS06750	0.61	+0.3
1,384,851	-		ABIE41_RS06750	0.61	+0.6
1,384,851	-		ABIE41_RS06750	0.61	+0.4
1,384,866	+		ABIE41_RS06750	0.62	+0.6
1,384,889	+		ABIE41_RS06750	0.62	-2.9
1,384,889	+		ABIE41_RS06750	0.62	+0.8
1,384,890	-		ABIE41_RS06750	0.62	-1.1
1,384,890	-		ABIE41_RS06750	0.62	-0.6
1,384,942	+		ABIE41_RS06750	0.64	+0.1
1,384,942	+		ABIE41_RS06750	0.64	+0.5
1,384,942	+		ABIE41_RS06750	0.64	+1.0
1,384,942	+		ABIE41_RS06750	0.64	+1.6
1,384,942	+		ABIE41_RS06750	0.64	-4.2
1,384,942	+		ABIE41_RS06750	0.64	+0.5
1,384,942	+		ABIE41_RS06750	0.64	+1.0
1,384,942	+		ABIE41_RS06750	0.64	+0.1
1,384,942	+		ABIE41_RS06750	0.64	+0.1
1,384,942	+		ABIE41_RS06750	0.64	+1.7
1,384,942	+		ABIE41_RS06750	0.64	+0.6
1,384,943	-		ABIE41_RS06750	0.64	-0.1
1,384,943	-		ABIE41_RS06750	0.64	-1.9
1,384,943	-		ABIE41_RS06750	0.64	+0.1
1,384,943	-		ABIE41_RS06750	0.64	-0.4
1,384,943	-		ABIE41_RS06750	0.64	+1.0
1,384,943	-		ABIE41_RS06750	0.64	-0.5
1,384,943	-		ABIE41_RS06750	0.64	-0.4
1,384,943	-		ABIE41_RS06750	0.64	-0.5
1,384,943	-		ABIE41_RS06750	0.64	+1.6
1,384,943	-		ABIE41_RS06750	0.64	+0.9
1,384,943	-		ABIE41_RS06750	0.64	+0.5
1,384,943	-		ABIE41_RS06750	0.64	+0.1
1,384,943	-		ABIE41_RS06750	0.64	+0.2
1,384,943	-		ABIE41_RS06750	0.64	+0.0
1,384,943	-		ABIE41_RS06750	0.64	-0.4
1,385,995	-				+0.3
1,385,996	+				+2.9
1,385,996	+				-0.7
1,385,996	+				+0.7
1,385,996	+				-0.2
1,385,996	+				+0.6
1,385,996	+				+0.9
1,385,997	-				-1.2
1,385,997	-				-0.0
1,385,997	-				+1.0
1,386,060	+				+2.1
1,386,061	-				-2.4
1,386,101	+				+0.3
1,386,101	+				+0.9
1,386,101	+				+0.2
1,386,101	+				+0.0
1,386,101	+				-1.2
1,386,101	+				-0.6
1,386,101	+				+1.8
1,386,101	+				-0.0
1,386,101	+				-3.8
1,386,101	+				-4.5
1,386,101	+				-0.3
1,386,101	+				+0.4
1,386,101	+				+0.2
1,386,102	-				-0.2
1,386,102	-				-0.4
1,386,102	-				-1.2
1,386,102	-				+0.7
1,386,102	-				-1.3
1,386,102	-				+1.4
1,386,102	-				-1.3
1,386,102	-				-1.2
1,386,102	-				-0.3
1,386,102	-				+0.3
1,386,102	-				+0.4
1,386,102	-				+1.7
1,386,194	+				+0.5
1,386,194	+				-0.7
1,386,195	-				-0.3
1,386,250	+				-1.8
1,386,250	+				+0.7
1,386,250	+				-2.5
1,386,250	+				-1.4
1,386,250	+				+0.5
1,386,251	-				+0.2
1,386,251	-				+0.2
1,386,251	-				-1.4
1,386,251	-				-0.7
1,386,251	-				+1.1
1,386,290	+				+0.6
1,386,290	+				-2.0
1,386,290	+				+0.1
1,386,291	-				-0.6
1,386,291	-				+1.0
1,386,291	-				+0.2
1,386,291	-				+1.3
1,386,291	-				-1.9
1,386,291	-				-0.3
1,386,371	+				+0.4
1,386,372	-				+0.3
1,386,372	-				-1.2
1,386,372	-				+0.8
1,386,372	-				-2.3
1,386,410	-				-0.6
1,386,422	+				+0.2
1,386,422	+				+0.3
1,386,422	+				-0.2
1,386,423	-				+0.5
1,386,517	+				+0.3
1,386,517	+				-1.3
1,386,518	-				+0.6
1,386,600	+				-0.2
1,386,600	+				-0.7
1,386,600	+				-0.6
1,386,600	+				+0.1
1,386,600	+				+1.4
1,386,601	-				-1.4
1,386,601	-				-0.5
1,386,601	-				+2.2
1,386,718	-				+0.2
1,386,799	-				+0.1
1,386,799	-				-2.8
1,386,811	+				+0.0
1,386,812	-				-0.6
1,386,833	+				+0.3
1,386,833	+				-1.5
1,386,833	+				-0.7
1,386,833	+				+1.1
1,386,833	+				-0.1
1,386,833	+				-1.3
1,386,833	+				-1.7
1,386,833	+				+2.5
1,386,833	+				+0.9
1,386,833	+				-0.8
1,386,833	+				+0.1
1,386,833	+				+0.7
1,386,833	+				+0.7
1,386,833	+				+0.5
1,386,834	-				-0.4
1,386,834	-				+0.2
1,386,834	-				-3.4
1,386,834	-				-0.6
1,386,834	-				-1.6
1,386,834	-				-0.7
1,386,834	-				+0.7
1,386,834	-				-0.6
1,386,834	-				-0.4
1,386,834	-				+0.2
1,386,834	-				+0.6
1,386,856	+				+0.3
1,386,856	+				-1.4
1,386,856	+				+1.7
1,386,856	+				-0.8
1,386,856	+				+1.1
1,386,857	-				-0.9
1,386,857	-				+0.2
1,386,857	-				+0.7
1,386,857	-				-1.4
1,386,857	-				-0.3
1,386,858	+				-1.9
1,386,858	+				-1.7
1,386,858	+				-0.7
1,386,858	+				+1.3
1,386,858	+				+1.0
1,386,858	+				+0.6
1,386,858	+				-0.1
1,386,859	-				-1.4
1,386,859	-				+0.6
1,386,859	-				-0.4
1,386,859	-				+0.0
1,386,860	+				-2.9
1,386,860	+				-0.3
1,386,860	+				+0.6
1,386,860	+				+0.2
1,386,860	+				-0.8
1,386,861	-				-1.4
1,386,861	-				-0.1
1,386,861	-				+0.5
1,386,861	-				+1.2
1,386,861	-				+0.6