Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_23740 and OH686_23745 overlap by 4 nucleotides OH686_23745 and OH686_23750 overlap by 38 nucleotides OH686_23750 and OH686_23755 are separated by 11 nucleotides
OH686_23740: OH686_23740 - Phosphoserine phosphatase rsbX , at 4,809,655 to 4,810,629
_23740
OH686_23745: OH686_23745 - Anti-sigma B factor RsbT, at 4,810,626 to 4,811,021
_23745
OH686_23750: OH686_23750 - RsbS, negative regulator of sigma-B, at 4,810,984 to 4,811,406
_23750
OH686_23755: OH686_23755 - RsbT co-antagonist protein RsbRA, at 4,811,418 to 4,812,257
_23755
Position (kb)
4810
4811
4812 Strain fitness (log2 ratio)
-1
0
1
2 at 4810.023 kb on + strand, within OH686_23740 at 4810.023 kb on + strand, within OH686_23740 at 4810.023 kb on + strand, within OH686_23740 at 4810.023 kb on + strand, within OH686_23740 at 4810.023 kb on + strand, within OH686_23740 at 4810.023 kb on + strand, within OH686_23740 at 4810.023 kb on + strand, within OH686_23740 at 4810.023 kb on + strand, within OH686_23740 at 4810.033 kb on + strand, within OH686_23740 at 4810.033 kb on + strand, within OH686_23740 at 4810.283 kb on + strand, within OH686_23740 at 4810.283 kb on + strand, within OH686_23740 at 4810.287 kb on + strand, within OH686_23740 at 4810.288 kb on - strand, within OH686_23740 at 4810.352 kb on + strand, within OH686_23740 at 4810.352 kb on + strand, within OH686_23740 at 4810.352 kb on + strand, within OH686_23740 at 4810.353 kb on - strand, within OH686_23740 at 4810.436 kb on + strand, within OH686_23740 at 4810.437 kb on - strand, within OH686_23740 at 4810.437 kb on - strand, within OH686_23740 at 4810.437 kb on - strand, within OH686_23740 at 4810.437 kb on - strand, within OH686_23740 at 4810.439 kb on + strand, within OH686_23740 at 4810.439 kb on + strand, within OH686_23740 at 4810.439 kb on + strand, within OH686_23740 at 4810.439 kb on + strand, within OH686_23740 at 4810.439 kb on + strand, within OH686_23740 at 4810.439 kb on + strand, within OH686_23740 at 4810.440 kb on - strand, within OH686_23740 at 4810.641 kb on + strand at 4810.641 kb on + strand at 4810.641 kb on + strand at 4810.641 kb on + strand at 4810.642 kb on - strand at 4810.642 kb on - strand at 4810.642 kb on - strand at 4810.725 kb on + strand, within OH686_23745 at 4810.742 kb on + strand, within OH686_23745 at 4810.742 kb on + strand, within OH686_23745 at 4810.742 kb on + strand, within OH686_23745 at 4810.742 kb on + strand, within OH686_23745 at 4810.742 kb on + strand, within OH686_23745 at 4810.742 kb on + strand, within OH686_23745 at 4810.742 kb on + strand, within OH686_23745 at 4810.743 kb on - strand, within OH686_23745 at 4810.743 kb on - strand, within OH686_23745 at 4810.743 kb on - strand, within OH686_23745 at 4810.743 kb on - strand, within OH686_23745 at 4810.744 kb on + strand, within OH686_23745 at 4810.867 kb on + strand, within OH686_23745 at 4810.867 kb on + strand, within OH686_23745 at 4810.908 kb on + strand, within OH686_23745 at 4810.908 kb on + strand, within OH686_23745 at 4810.908 kb on + strand, within OH686_23745 at 4810.908 kb on + strand, within OH686_23745 at 4810.908 kb on + strand, within OH686_23745 at 4810.909 kb on - strand, within OH686_23745 at 4810.909 kb on - strand, within OH686_23745 at 4810.909 kb on - strand, within OH686_23745 at 4810.909 kb on - strand, within OH686_23745 at 4810.959 kb on + strand, within OH686_23745 at 4810.959 kb on + strand, within OH686_23745 at 4810.959 kb on + strand, within OH686_23745 at 4811.170 kb on + strand, within OH686_23750 at 4811.170 kb on + strand, within OH686_23750 at 4811.171 kb on - strand, within OH686_23750 at 4811.206 kb on + strand, within OH686_23750 at 4811.206 kb on + strand, within OH686_23750 at 4811.206 kb on + strand, within OH686_23750 at 4811.206 kb on + strand, within OH686_23750 at 4811.206 kb on + strand, within OH686_23750 at 4811.207 kb on - strand, within OH686_23750 at 4811.259 kb on + strand, within OH686_23750 at 4811.259 kb on + strand, within OH686_23750 at 4811.260 kb on - strand, within OH686_23750 at 4811.369 kb on + strand at 4811.369 kb on + strand at 4811.369 kb on + strand at 4811.369 kb on + strand at 4811.369 kb on + strand at 4811.369 kb on + strand at 4811.369 kb on + strand at 4811.369 kb on + strand at 4811.370 kb on - strand at 4811.370 kb on - strand at 4811.401 kb on + strand at 4811.402 kb on - strand at 4811.402 kb on - strand at 4811.402 kb on - strand at 4811.402 kb on - strand at 4811.402 kb on - strand at 4811.402 kb on - strand at 4811.402 kb on - strand at 4811.402 kb on - strand at 4811.402 kb on - strand at 4811.402 kb on - strand at 4811.419 kb on + strand at 4811.420 kb on - strand at 4811.854 kb on + strand, within OH686_23755 at 4811.854 kb on + strand, within OH686_23755 at 4811.854 kb on + strand, within OH686_23755 at 4811.854 kb on + strand, within OH686_23755 at 4811.854 kb on + strand, within OH686_23755 at 4811.854 kb on + strand, within OH686_23755 at 4811.854 kb on + strand, within OH686_23755 at 4811.854 kb on + strand, within OH686_23755 at 4811.854 kb on + strand, within OH686_23755 at 4811.854 kb on + strand, within OH686_23755 at 4811.854 kb on + strand, within OH686_23755 at 4811.855 kb on - strand, within OH686_23755 at 4811.855 kb on - strand, within OH686_23755 at 4811.855 kb on - strand, within OH686_23755 at 4811.855 kb on - strand, within OH686_23755 at 4811.855 kb on - strand, within OH686_23755 at 4811.855 kb on - strand, within OH686_23755 at 4811.857 kb on + strand, within OH686_23755 at 4811.858 kb on - strand, within OH686_23755 at 4811.858 kb on - strand, within OH686_23755 at 4812.231 kb on + strand at 4812.231 kb on + strand at 4812.232 kb on - strand at 4812.232 kb on - strand at 4812.232 kb on - strand at 4812.266 kb on + strand at 4812.281 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 4,810,023 + OH686_23740 0.38 -1.2 4,810,023 + OH686_23740 0.38 -1.1 4,810,023 + OH686_23740 0.38 +0.1 4,810,023 + OH686_23740 0.38 +0.5 4,810,023 + OH686_23740 0.38 +0.8 4,810,023 + OH686_23740 0.38 +0.7 4,810,023 + OH686_23740 0.38 -1.1 4,810,023 + OH686_23740 0.38 +0.2 4,810,033 + OH686_23740 0.39 +0.3 4,810,033 + OH686_23740 0.39 -1.1 4,810,283 + OH686_23740 0.64 -0.3 4,810,283 + OH686_23740 0.64 +0.4 4,810,287 + OH686_23740 0.65 +1.8 4,810,288 - OH686_23740 0.65 -1.1 4,810,352 + OH686_23740 0.71 -0.0 4,810,352 + OH686_23740 0.71 -1.1 4,810,352 + OH686_23740 0.71 -1.4 4,810,353 - OH686_23740 0.72 -0.6 4,810,436 + OH686_23740 0.80 -0.5 4,810,437 - OH686_23740 0.80 +0.2 4,810,437 - OH686_23740 0.80 +0.8 4,810,437 - OH686_23740 0.80 -1.2 4,810,437 - OH686_23740 0.80 +0.8 4,810,439 + OH686_23740 0.80 +0.3 4,810,439 + OH686_23740 0.80 +0.4 4,810,439 + OH686_23740 0.80 -0.2 4,810,439 + OH686_23740 0.80 +0.2 4,810,439 + OH686_23740 0.80 -0.2 4,810,439 + OH686_23740 0.80 +0.0 4,810,440 - OH686_23740 0.81 +0.5 4,810,641 + +0.9 4,810,641 + +0.2 4,810,641 + -0.4 4,810,641 + -0.4 4,810,642 - +0.4 4,810,642 - +0.9 4,810,642 - -0.1 4,810,725 + OH686_23745 0.25 -0.2 4,810,742 + OH686_23745 0.29 +0.6 4,810,742 + OH686_23745 0.29 +0.3 4,810,742 + OH686_23745 0.29 +1.3 4,810,742 + OH686_23745 0.29 -0.8 4,810,742 + OH686_23745 0.29 -1.2 4,810,742 + OH686_23745 0.29 +0.2 4,810,742 + OH686_23745 0.29 -0.6 4,810,743 - OH686_23745 0.30 +0.0 4,810,743 - OH686_23745 0.30 +0.2 4,810,743 - OH686_23745 0.30 -0.3 4,810,743 - OH686_23745 0.30 -0.2 4,810,744 + OH686_23745 0.30 -0.2 4,810,867 + OH686_23745 0.61 -0.5 4,810,867 + OH686_23745 0.61 -0.7 4,810,908 + OH686_23745 0.71 -0.5 4,810,908 + OH686_23745 0.71 +0.5 4,810,908 + OH686_23745 0.71 -0.7 4,810,908 + OH686_23745 0.71 +0.2 4,810,908 + OH686_23745 0.71 +0.2 4,810,909 - OH686_23745 0.71 +1.5 4,810,909 - OH686_23745 0.71 +0.3 4,810,909 - OH686_23745 0.71 -0.2 4,810,909 - OH686_23745 0.71 +0.5 4,810,959 + OH686_23745 0.84 -0.4 4,810,959 + OH686_23745 0.84 -0.6 4,810,959 + OH686_23745 0.84 -0.6 4,811,170 + OH686_23750 0.44 +0.9 4,811,170 + OH686_23750 0.44 +0.1 4,811,171 - OH686_23750 0.44 -0.6 4,811,206 + OH686_23750 0.52 -1.1 4,811,206 + OH686_23750 0.52 +2.0 4,811,206 + OH686_23750 0.52 +1.0 4,811,206 + OH686_23750 0.52 +0.8 4,811,206 + OH686_23750 0.52 +0.6 4,811,207 - OH686_23750 0.53 -1.2 4,811,259 + OH686_23750 0.65 -0.7 4,811,259 + OH686_23750 0.65 +0.7 4,811,260 - OH686_23750 0.65 +0.5 4,811,369 + -0.5 4,811,369 + -0.6 4,811,369 + -1.7 4,811,369 + -1.0 4,811,369 + +0.3 4,811,369 + -1.4 4,811,369 + +0.2 4,811,369 + +0.2 4,811,370 - -0.8 4,811,370 - -0.2 4,811,401 + -0.5 4,811,402 - +2.0 4,811,402 - +1.8 4,811,402 - -0.6 4,811,402 - -0.2 4,811,402 - -0.7 4,811,402 - -0.2 4,811,402 - +0.1 4,811,402 - -0.1 4,811,402 - -0.4 4,811,402 - -0.2 4,811,419 + +0.2 4,811,420 - +0.3 4,811,854 + OH686_23755 0.52 +0.1 4,811,854 + OH686_23755 0.52 -0.5 4,811,854 + OH686_23755 0.52 -0.1 4,811,854 + OH686_23755 0.52 +1.0 4,811,854 + OH686_23755 0.52 -0.8 4,811,854 + OH686_23755 0.52 -0.5 4,811,854 + OH686_23755 0.52 -0.2 4,811,854 + OH686_23755 0.52 +0.8 4,811,854 + OH686_23755 0.52 -0.2 4,811,854 + OH686_23755 0.52 +0.7 4,811,854 + OH686_23755 0.52 -0.8 4,811,855 - OH686_23755 0.52 +0.6 4,811,855 - OH686_23755 0.52 -0.9 4,811,855 - OH686_23755 0.52 -0.2 4,811,855 - OH686_23755 0.52 +0.7 4,811,855 - OH686_23755 0.52 -0.2 4,811,855 - OH686_23755 0.52 -0.1 4,811,857 + OH686_23755 0.52 +0.2 4,811,858 - OH686_23755 0.52 -0.4 4,811,858 - OH686_23755 0.52 -0.6 4,812,231 + -0.7 4,812,231 + -0.3 4,812,232 - -0.7 4,812,232 - -0.0 4,812,232 - -0.2 4,812,266 + -0.1 4,812,281 + +0.0
Or see this region's nucleotide sequence