Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_23655 and OH686_23660 are separated by 103 nucleotides OH686_23660 and OH686_23665 are separated by 308 nucleotides OH686_23665 and OH686_23670 are separated by 246 nucleotides OH686_23670 and OH686_23675 are separated by 137 nucleotides
OH686_23655: OH686_23655 - 3-demethylubiquinone-9 3-methyltransferase, at 4,797,714 to 4,798,193
_23655
OH686_23660: OH686_23660 - hypothetical protein, at 4,798,297 to 4,798,668
_23660
OH686_23665: OH686_23665 - hypothetical protein, at 4,798,977 to 4,799,336
_23665
OH686_23670: OH686_23670 - Uncharacterized protein YmdF, at 4,799,583 to 4,799,852
_23670
OH686_23675: OH686_23675 - hypothetical protein, at 4,799,990 to 4,800,235
_23675
Position (kb) 4798
4799
4800 Strain fitness (log2 ratio) -2
-1
0
1 at 4798.001 kb on + strand, within OH686_23655 at 4798.002 kb on - strand, within OH686_23655 at 4798.002 kb on - strand, within OH686_23655 at 4798.072 kb on + strand, within OH686_23655 at 4798.073 kb on - strand, within OH686_23655 at 4798.130 kb on - strand, within OH686_23655 at 4798.162 kb on + strand at 4798.163 kb on - strand at 4798.217 kb on - strand at 4798.236 kb on + strand at 4798.236 kb on + strand at 4798.236 kb on + strand at 4798.237 kb on - strand at 4798.237 kb on - strand at 4798.237 kb on - strand at 4798.237 kb on - strand at 4798.370 kb on + strand, within OH686_23660 at 4798.370 kb on + strand, within OH686_23660 at 4798.370 kb on + strand, within OH686_23660 at 4798.371 kb on - strand, within OH686_23660 at 4798.393 kb on + strand, within OH686_23660 at 4798.394 kb on - strand, within OH686_23660 at 4798.437 kb on - strand, within OH686_23660 at 4798.445 kb on + strand, within OH686_23660 at 4798.445 kb on + strand, within OH686_23660 at 4798.445 kb on + strand, within OH686_23660 at 4798.445 kb on + strand, within OH686_23660 at 4798.445 kb on + strand, within OH686_23660 at 4798.446 kb on - strand, within OH686_23660 at 4798.446 kb on - strand, within OH686_23660 at 4798.446 kb on - strand, within OH686_23660 at 4798.446 kb on - strand, within OH686_23660 at 4798.446 kb on - strand, within OH686_23660 at 4798.530 kb on - strand, within OH686_23660 at 4798.532 kb on + strand, within OH686_23660 at 4798.532 kb on + strand, within OH686_23660 at 4798.532 kb on + strand, within OH686_23660 at 4798.532 kb on + strand, within OH686_23660 at 4798.532 kb on + strand, within OH686_23660 at 4798.533 kb on - strand, within OH686_23660 at 4798.533 kb on - strand, within OH686_23660 at 4798.533 kb on - strand, within OH686_23660 at 4798.533 kb on - strand, within OH686_23660 at 4798.657 kb on + strand at 4798.657 kb on + strand at 4798.686 kb on + strand at 4798.686 kb on + strand at 4798.686 kb on + strand at 4798.686 kb on + strand at 4798.686 kb on + strand at 4798.687 kb on - strand at 4798.687 kb on - strand at 4798.687 kb on - strand at 4798.690 kb on + strand at 4798.690 kb on + strand at 4798.690 kb on + strand at 4798.690 kb on + strand at 4798.690 kb on + strand at 4798.691 kb on - strand at 4798.714 kb on + strand at 4798.714 kb on + strand at 4798.776 kb on + strand at 4798.776 kb on + strand at 4798.777 kb on - strand at 4798.777 kb on - strand at 4798.777 kb on - strand at 4798.780 kb on + strand at 4798.780 kb on + strand at 4798.781 kb on - strand at 4798.781 kb on - strand at 4798.781 kb on - strand at 4798.824 kb on + strand at 4798.824 kb on + strand at 4798.824 kb on + strand at 4798.825 kb on - strand at 4798.825 kb on - strand at 4798.825 kb on - strand at 4798.853 kb on + strand at 4798.853 kb on + strand at 4798.863 kb on + strand at 4798.902 kb on + strand at 4798.903 kb on - strand at 4798.949 kb on + strand at 4798.950 kb on - strand at 4798.950 kb on - strand at 4798.950 kb on - strand at 4798.951 kb on + strand at 4798.951 kb on + strand at 4798.951 kb on + strand at 4798.952 kb on - strand at 4798.952 kb on - strand at 4798.952 kb on - strand at 4798.979 kb on - strand at 4799.267 kb on + strand, within OH686_23665 at 4799.344 kb on + strand at 4799.353 kb on + strand at 4799.353 kb on + strand at 4799.353 kb on + strand at 4799.354 kb on - strand at 4799.354 kb on - strand at 4799.467 kb on + strand at 4799.468 kb on - strand at 4799.468 kb on - strand at 4799.468 kb on - strand at 4799.468 kb on - strand at 4799.468 kb on - strand at 4799.504 kb on + strand at 4799.505 kb on - strand at 4799.576 kb on + strand at 4799.588 kb on + strand at 4799.588 kb on + strand at 4799.589 kb on - strand at 4799.589 kb on - strand at 4799.747 kb on + strand, within OH686_23670 at 4799.850 kb on + strand at 4799.851 kb on - strand at 4799.851 kb on - strand at 4799.851 kb on - strand at 4799.853 kb on + strand at 4799.854 kb on - strand at 4799.919 kb on + strand at 4799.919 kb on + strand at 4799.919 kb on + strand at 4799.919 kb on + strand at 4799.920 kb on - strand at 4799.920 kb on - strand at 4799.920 kb on - strand at 4799.920 kb on - strand at 4799.920 kb on - strand at 4799.920 kb on - strand at 4799.958 kb on + strand at 4799.958 kb on + strand at 4799.958 kb on + strand at 4799.959 kb on - strand at 4799.959 kb on - strand at 4800.027 kb on - strand, within OH686_23675 at 4800.141 kb on + strand, within OH686_23675 at 4800.141 kb on + strand, within OH686_23675 at 4800.141 kb on + strand, within OH686_23675 at 4800.141 kb on + strand, within OH686_23675 at 4800.141 kb on + strand, within OH686_23675 at 4800.142 kb on - strand, within OH686_23675 at 4800.142 kb on - strand, within OH686_23675 at 4800.208 kb on + strand, within OH686_23675 at 4800.233 kb on + strand at 4800.234 kb on - strand at 4800.234 kb on - strand at 4800.237 kb on - strand at 4800.289 kb on + strand at 4800.289 kb on + strand at 4800.289 kb on + strand at 4800.290 kb on - strand at 4800.290 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 4,798,001 + OH686_23655 0.60 +0.2 4,798,002 - OH686_23655 0.60 -0.7 4,798,002 - OH686_23655 0.60 +0.4 4,798,072 + OH686_23655 0.75 -0.1 4,798,073 - OH686_23655 0.75 -0.7 4,798,130 - OH686_23655 0.87 +0.2 4,798,162 + -0.5 4,798,163 - -0.5 4,798,217 - -1.9 4,798,236 + +0.3 4,798,236 + +1.3 4,798,236 + +0.1 4,798,237 - +0.9 4,798,237 - +0.7 4,798,237 - +0.4 4,798,237 - -0.5 4,798,370 + OH686_23660 0.20 -0.7 4,798,370 + OH686_23660 0.20 -0.6 4,798,370 + OH686_23660 0.20 -0.1 4,798,371 - OH686_23660 0.20 +0.8 4,798,393 + OH686_23660 0.26 +0.2 4,798,394 - OH686_23660 0.26 +0.7 4,798,437 - OH686_23660 0.38 -0.6 4,798,445 + OH686_23660 0.40 -0.1 4,798,445 + OH686_23660 0.40 -0.5 4,798,445 + OH686_23660 0.40 -0.8 4,798,445 + OH686_23660 0.40 +0.0 4,798,445 + OH686_23660 0.40 +1.6 4,798,446 - OH686_23660 0.40 +1.0 4,798,446 - OH686_23660 0.40 -1.1 4,798,446 - OH686_23660 0.40 +0.4 4,798,446 - OH686_23660 0.40 +0.2 4,798,446 - OH686_23660 0.40 -0.5 4,798,530 - OH686_23660 0.63 +0.6 4,798,532 + OH686_23660 0.63 +0.0 4,798,532 + OH686_23660 0.63 -0.6 4,798,532 + OH686_23660 0.63 +0.6 4,798,532 + OH686_23660 0.63 +0.9 4,798,532 + OH686_23660 0.63 +0.4 4,798,533 - OH686_23660 0.63 -0.6 4,798,533 - OH686_23660 0.63 +0.3 4,798,533 - OH686_23660 0.63 +0.9 4,798,533 - OH686_23660 0.63 -1.0 4,798,657 + -0.5 4,798,657 + +0.3 4,798,686 + +0.2 4,798,686 + -0.9 4,798,686 + -0.8 4,798,686 + -0.3 4,798,686 + -0.8 4,798,687 - -0.2 4,798,687 - +0.2 4,798,687 - -0.8 4,798,690 + +0.1 4,798,690 + +0.1 4,798,690 + -0.6 4,798,690 + -0.3 4,798,690 + -0.6 4,798,691 - -0.8 4,798,714 + +0.2 4,798,714 + -0.4 4,798,776 + +0.5 4,798,776 + +0.5 4,798,777 - -0.1 4,798,777 - +0.8 4,798,777 - -0.8 4,798,780 + +0.4 4,798,780 + -0.0 4,798,781 - -0.2 4,798,781 - -0.1 4,798,781 - -0.6 4,798,824 + -0.1 4,798,824 + +0.2 4,798,824 + +0.6 4,798,825 - +0.8 4,798,825 - -0.1 4,798,825 - +1.0 4,798,853 + +0.2 4,798,853 + +0.8 4,798,863 + -0.6 4,798,902 + -0.6 4,798,903 - -0.5 4,798,949 + +0.4 4,798,950 - +0.1 4,798,950 - -0.0 4,798,950 - -0.6 4,798,951 + +1.0 4,798,951 + +0.2 4,798,951 + -0.6 4,798,952 - +0.6 4,798,952 - -0.1 4,798,952 - +1.0 4,798,979 - +0.4 4,799,267 + OH686_23665 0.81 +0.3 4,799,344 + +1.2 4,799,353 + -0.9 4,799,353 + +0.1 4,799,353 + +0.1 4,799,354 - +0.4 4,799,354 - -0.8 4,799,467 + -0.7 4,799,468 - -1.4 4,799,468 - +0.9 4,799,468 - +1.0 4,799,468 - -0.3 4,799,468 - +0.3 4,799,504 + -1.5 4,799,505 - +0.3 4,799,576 + -0.3 4,799,588 + -0.1 4,799,588 + +0.9 4,799,589 - +0.1 4,799,589 - -1.2 4,799,747 + OH686_23670 0.61 -0.5 4,799,850 + -0.4 4,799,851 - -0.5 4,799,851 - -0.4 4,799,851 - +0.8 4,799,853 + -0.1 4,799,854 - +0.6 4,799,919 + -0.2 4,799,919 + -0.2 4,799,919 + +0.1 4,799,919 + +0.3 4,799,920 - -0.1 4,799,920 - -0.5 4,799,920 - +0.4 4,799,920 - -0.7 4,799,920 - -1.2 4,799,920 - -0.8 4,799,958 + -0.6 4,799,958 + -0.2 4,799,958 + -0.5 4,799,959 - -1.1 4,799,959 - -0.5 4,800,027 - OH686_23675 0.15 -0.0 4,800,141 + OH686_23675 0.61 +0.6 4,800,141 + OH686_23675 0.61 -0.3 4,800,141 + OH686_23675 0.61 -0.3 4,800,141 + OH686_23675 0.61 -0.6 4,800,141 + OH686_23675 0.61 +0.1 4,800,142 - OH686_23675 0.62 -0.2 4,800,142 - OH686_23675 0.62 +0.1 4,800,208 + OH686_23675 0.89 -0.3 4,800,233 + +0.2 4,800,234 - -0.3 4,800,234 - +1.3 4,800,237 - +0.1 4,800,289 + -0.9 4,800,289 + -0.3 4,800,289 + +0.2 4,800,290 - -0.4 4,800,290 - +0.0
Or see this region's nucleotide sequence