Strain Fitness in Pseudomonas sp. S08-1 around OH686_21800

Experiment: acetate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOH686_21790 and OH686_21795 are separated by 66 nucleotidesOH686_21795 and OH686_21800 overlap by 4 nucleotidesOH686_21800 and OH686_21805 are separated by 16 nucleotides OH686_21790: OH686_21790 - molybdenum cofactor guanylyltransferase, at 4,437,028 to 4,437,609 _21790 OH686_21795: OH686_21795 - molybdenum cofactor biosynthesis protein B, at 4,437,676 to 4,438,215 _21795 OH686_21800: OH686_21800 - Molybdopterin molybdenumtransferase , at 4,438,212 to 4,439,408 _21800 OH686_21805: OH686_21805 - Transcriptional regulator, AraC family, at 4,439,425 to 4,440,453 _21805 Position (kb) 4438 4439 4440Strain fitness (log2 ratio) -2 -1 0 1at 4437.310 kb on + strand, within OH686_21790at 4437.310 kb on + strand, within OH686_21790at 4437.310 kb on + strand, within OH686_21790at 4437.311 kb on - strand, within OH686_21790at 4437.313 kb on + strand, within OH686_21790at 4437.313 kb on + strand, within OH686_21790at 4437.313 kb on + strand, within OH686_21790at 4437.313 kb on + strand, within OH686_21790at 4437.313 kb on + strand, within OH686_21790at 4437.314 kb on - strand, within OH686_21790at 4437.422 kb on + strand, within OH686_21790at 4437.423 kb on - strand, within OH686_21790at 4437.423 kb on - strand, within OH686_21790at 4437.475 kb on + strand, within OH686_21790at 4437.637 kb on + strandat 4437.637 kb on + strandat 4437.637 kb on + strandat 4437.637 kb on + strandat 4437.637 kb on + strandat 4437.637 kb on + strandat 4437.637 kb on + strandat 4437.637 kb on + strandat 4437.638 kb on - strandat 4437.638 kb on - strandat 4437.638 kb on - strandat 4437.638 kb on - strandat 4437.638 kb on - strandat 4437.638 kb on - strandat 4437.638 kb on - strandat 4437.638 kb on - strandat 4437.639 kb on + strandat 4437.639 kb on + strandat 4437.639 kb on + strandat 4437.639 kb on + strandat 4437.639 kb on + strandat 4437.639 kb on + strandat 4437.639 kb on + strandat 4437.639 kb on + strandat 4437.639 kb on + strandat 4437.639 kb on + strandat 4437.639 kb on + strandat 4437.639 kb on + strandat 4437.639 kb on + strandat 4437.640 kb on - strandat 4437.640 kb on - strandat 4437.640 kb on - strandat 4437.640 kb on - strandat 4437.640 kb on - strandat 4437.824 kb on + strand, within OH686_21795at 4437.824 kb on + strand, within OH686_21795at 4437.824 kb on + strand, within OH686_21795at 4437.825 kb on - strand, within OH686_21795at 4437.825 kb on - strand, within OH686_21795at 4437.841 kb on + strand, within OH686_21795at 4437.950 kb on + strand, within OH686_21795at 4437.951 kb on - strand, within OH686_21795at 4438.004 kb on + strand, within OH686_21795at 4438.005 kb on - strand, within OH686_21795at 4438.274 kb on + strandat 4438.274 kb on + strandat 4438.275 kb on - strandat 4438.275 kb on - strandat 4438.275 kb on - strandat 4438.573 kb on + strand, within OH686_21800at 4438.573 kb on + strand, within OH686_21800at 4438.806 kb on + strand, within OH686_21800at 4438.806 kb on + strand, within OH686_21800at 4438.806 kb on + strand, within OH686_21800at 4438.806 kb on + strand, within OH686_21800at 4438.807 kb on - strand, within OH686_21800at 4438.921 kb on + strand, within OH686_21800at 4438.922 kb on - strand, within OH686_21800at 4438.922 kb on - strand, within OH686_21800at 4438.922 kb on - strand, within OH686_21800at 4439.142 kb on + strand, within OH686_21800at 4439.142 kb on + strand, within OH686_21800at 4439.142 kb on + strand, within OH686_21800at 4439.278 kb on - strand, within OH686_21800at 4439.278 kb on - strand, within OH686_21800at 4439.355 kb on + strandat 4439.355 kb on + strandat 4439.355 kb on + strandat 4439.355 kb on + strandat 4439.355 kb on + strandat 4439.356 kb on - strandat 4439.356 kb on - strandat 4439.356 kb on - strandat 4439.356 kb on - strandat 4439.356 kb on - strandat 4439.426 kb on + strandat 4439.426 kb on + strandat 4439.427 kb on - strandat 4439.427 kb on - strandat 4439.427 kb on - strandat 4439.528 kb on + strand, within OH686_21805at 4439.528 kb on + strand, within OH686_21805at 4439.528 kb on + strand, within OH686_21805at 4439.528 kb on + strand, within OH686_21805at 4439.529 kb on - strand, within OH686_21805at 4439.529 kb on - strand, within OH686_21805at 4439.529 kb on - strand, within OH686_21805at 4439.529 kb on - strand, within OH686_21805at 4439.529 kb on - strand, within OH686_21805at 4439.570 kb on + strand, within OH686_21805at 4439.570 kb on + strand, within OH686_21805at 4439.570 kb on + strand, within OH686_21805at 4439.570 kb on + strand, within OH686_21805at 4439.570 kb on + strand, within OH686_21805at 4439.570 kb on + strand, within OH686_21805at 4439.571 kb on - strand, within OH686_21805at 4439.571 kb on - strand, within OH686_21805at 4439.571 kb on - strand, within OH686_21805at 4439.571 kb on - strand, within OH686_21805at 4439.571 kb on - strand, within OH686_21805at 4439.571 kb on - strand, within OH686_21805at 4439.615 kb on + strand, within OH686_21805at 4439.615 kb on + strand, within OH686_21805at 4439.615 kb on + strand, within OH686_21805at 4439.616 kb on - strand, within OH686_21805at 4439.616 kb on - strand, within OH686_21805at 4439.846 kb on + strand, within OH686_21805at 4439.846 kb on + strand, within OH686_21805at 4439.846 kb on + strand, within OH686_21805at 4439.846 kb on + strand, within OH686_21805at 4439.847 kb on - strand, within OH686_21805at 4439.847 kb on - strand, within OH686_21805at 4439.916 kb on - strand, within OH686_21805at 4439.916 kb on - strand, within OH686_21805at 4440.002 kb on + strand, within OH686_21805at 4440.003 kb on - strand, within OH686_21805at 4440.003 kb on - strand, within OH686_21805at 4440.003 kb on - strand, within OH686_21805at 4440.197 kb on + strand, within OH686_21805at 4440.197 kb on + strand, within OH686_21805at 4440.197 kb on + strand, within OH686_21805at 4440.197 kb on + strand, within OH686_21805at 4440.198 kb on - strand, within OH686_21805at 4440.226 kb on + strand, within OH686_21805at 4440.226 kb on + strand, within OH686_21805at 4440.226 kb on + strand, within OH686_21805at 4440.226 kb on + strand, within OH686_21805at 4440.226 kb on + strand, within OH686_21805at 4440.227 kb on - strand, within OH686_21805at 4440.227 kb on - strand, within OH686_21805at 4440.227 kb on - strand, within OH686_21805at 4440.227 kb on - strand, within OH686_21805at 4440.227 kb on - strand, within OH686_21805at 4440.230 kb on + strand, within OH686_21805at 4440.302 kb on - strand, within OH686_21805at 4440.302 kb on - strand, within OH686_21805at 4440.302 kb on - strand, within OH686_21805

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Per-strain Table

Position Strand Gene LocusTag Fraction acetate (C)
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4,437,310 + OH686_21790 0.48 +0.3
4,437,310 + OH686_21790 0.48 +0.7
4,437,310 + OH686_21790 0.48 -0.8
4,437,311 - OH686_21790 0.49 +0.4
4,437,313 + OH686_21790 0.49 -0.1
4,437,313 + OH686_21790 0.49 +0.0
4,437,313 + OH686_21790 0.49 +0.6
4,437,313 + OH686_21790 0.49 -0.1
4,437,313 + OH686_21790 0.49 -0.2
4,437,314 - OH686_21790 0.49 +0.2
4,437,422 + OH686_21790 0.68 +0.3
4,437,423 - OH686_21790 0.68 +0.3
4,437,423 - OH686_21790 0.68 +0.2
4,437,475 + OH686_21790 0.77 +0.5
4,437,637 + +0.7
4,437,637 + +0.0
4,437,637 + +0.4
4,437,637 + -0.9
4,437,637 + -0.9
4,437,637 + +0.5
4,437,637 + +0.1
4,437,637 + -0.5
4,437,638 - +0.0
4,437,638 - +0.5
4,437,638 - +1.1
4,437,638 - -1.7
4,437,638 - +0.5
4,437,638 - +0.1
4,437,638 - +0.4
4,437,638 - -0.9
4,437,639 + -0.0
4,437,639 + -1.5
4,437,639 + +0.3
4,437,639 + -1.9
4,437,639 + +0.3
4,437,639 + -0.4
4,437,639 + -0.9
4,437,639 + -0.4
4,437,639 + -0.2
4,437,639 + +0.1
4,437,639 + -0.8
4,437,639 + +0.6
4,437,639 + -0.3
4,437,640 - +0.7
4,437,640 - +1.1
4,437,640 - -1.0
4,437,640 - -0.2
4,437,640 - -0.6
4,437,824 + OH686_21795 0.27 +1.0
4,437,824 + OH686_21795 0.27 +0.7
4,437,824 + OH686_21795 0.27 -0.3
4,437,825 - OH686_21795 0.28 -0.9
4,437,825 - OH686_21795 0.28 +1.3
4,437,841 + OH686_21795 0.31 +1.1
4,437,950 + OH686_21795 0.51 +1.4
4,437,951 - OH686_21795 0.51 +1.5
4,438,004 + OH686_21795 0.61 +0.7
4,438,005 - OH686_21795 0.61 +0.1
4,438,274 + +1.6
4,438,274 + +1.7
4,438,275 - -0.5
4,438,275 - +0.6
4,438,275 - +0.7
4,438,573 + OH686_21800 0.30 -0.5
4,438,573 + OH686_21800 0.30 +0.1
4,438,806 + OH686_21800 0.50 +0.3
4,438,806 + OH686_21800 0.50 +0.8
4,438,806 + OH686_21800 0.50 +0.9
4,438,806 + OH686_21800 0.50 +0.4
4,438,807 - OH686_21800 0.50 +1.0
4,438,921 + OH686_21800 0.59 -0.3
4,438,922 - OH686_21800 0.59 +1.2
4,438,922 - OH686_21800 0.59 -1.1
4,438,922 - OH686_21800 0.59 +1.6
4,439,142 + OH686_21800 0.78 +0.3
4,439,142 + OH686_21800 0.78 +0.3
4,439,142 + OH686_21800 0.78 -0.2
4,439,278 - OH686_21800 0.89 +0.6
4,439,278 - OH686_21800 0.89 +0.1
4,439,355 + -1.2
4,439,355 + +0.4
4,439,355 + +1.1
4,439,355 + -0.0
4,439,355 + +0.4
4,439,356 - +1.1
4,439,356 - +0.4
4,439,356 - +0.6
4,439,356 - +0.7
4,439,356 - +0.7
4,439,426 + -0.8
4,439,426 + +0.1
4,439,427 - -1.1
4,439,427 - -0.6
4,439,427 - +0.6
4,439,528 + OH686_21805 0.10 +0.6
4,439,528 + OH686_21805 0.10 +1.4
4,439,528 + OH686_21805 0.10 +0.3
4,439,528 + OH686_21805 0.10 +0.2
4,439,529 - OH686_21805 0.10 +0.1
4,439,529 - OH686_21805 0.10 +0.9
4,439,529 - OH686_21805 0.10 +0.7
4,439,529 - OH686_21805 0.10 +0.5
4,439,529 - OH686_21805 0.10 -0.3
4,439,570 + OH686_21805 0.14 +0.5
4,439,570 + OH686_21805 0.14 -0.0
4,439,570 + OH686_21805 0.14 -0.9
4,439,570 + OH686_21805 0.14 -0.1
4,439,570 + OH686_21805 0.14 +0.1
4,439,570 + OH686_21805 0.14 +0.7
4,439,571 - OH686_21805 0.14 -0.6
4,439,571 - OH686_21805 0.14 +0.6
4,439,571 - OH686_21805 0.14 -1.0
4,439,571 - OH686_21805 0.14 -0.2
4,439,571 - OH686_21805 0.14 +0.9
4,439,571 - OH686_21805 0.14 +1.2
4,439,615 + OH686_21805 0.18 +0.3
4,439,615 + OH686_21805 0.18 -0.1
4,439,615 + OH686_21805 0.18 -0.2
4,439,616 - OH686_21805 0.19 +0.8
4,439,616 - OH686_21805 0.19 +0.0
4,439,846 + OH686_21805 0.41 -1.6
4,439,846 + OH686_21805 0.41 +0.5
4,439,846 + OH686_21805 0.41 -0.8
4,439,846 + OH686_21805 0.41 +0.2
4,439,847 - OH686_21805 0.41 -0.9
4,439,847 - OH686_21805 0.41 -0.9
4,439,916 - OH686_21805 0.48 -0.6
4,439,916 - OH686_21805 0.48 +0.7
4,440,002 + OH686_21805 0.56 +0.1
4,440,003 - OH686_21805 0.56 +1.1
4,440,003 - OH686_21805 0.56 +0.3
4,440,003 - OH686_21805 0.56 -0.6
4,440,197 + OH686_21805 0.75 -0.7
4,440,197 + OH686_21805 0.75 +0.2
4,440,197 + OH686_21805 0.75 +0.4
4,440,197 + OH686_21805 0.75 +0.4
4,440,198 - OH686_21805 0.75 +0.0
4,440,226 + OH686_21805 0.78 +0.2
4,440,226 + OH686_21805 0.78 +0.4
4,440,226 + OH686_21805 0.78 -2.2
4,440,226 + OH686_21805 0.78 -0.2
4,440,226 + OH686_21805 0.78 -0.9
4,440,227 - OH686_21805 0.78 +0.7
4,440,227 - OH686_21805 0.78 +0.5
4,440,227 - OH686_21805 0.78 -0.3
4,440,227 - OH686_21805 0.78 -0.2
4,440,227 - OH686_21805 0.78 +0.1
4,440,230 + OH686_21805 0.78 -0.9
4,440,302 - OH686_21805 0.85 -0.2
4,440,302 - OH686_21805 0.85 -0.3
4,440,302 - OH686_21805 0.85 -0.0

Or see this region's nucleotide sequence