Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_21715 and OH686_21720 overlap by 4 nucleotides OH686_21720 and OH686_21725 are separated by 9 nucleotides OH686_21725 and OH686_21730 are separated by 8 nucleotides
OH686_21715: OH686_21715 - hypothetical protein, at 4,419,700 to 4,421,835
_21715
OH686_21720: OH686_21720 - hypothetical protein, at 4,421,832 to 4,422,455
_21720
OH686_21725: OH686_21725 - hypothetical protein, at 4,422,465 to 4,422,818
_21725
OH686_21730: OH686_21730 - hypothetical protein, at 4,422,827 to 4,423,774
_21730
Position (kb) 4421
4422
4423 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4420.881 kb on - strand, within OH686_21715 at 4420.960 kb on + strand, within OH686_21715 at 4420.996 kb on + strand, within OH686_21715 at 4420.996 kb on + strand, within OH686_21715 at 4420.996 kb on + strand, within OH686_21715 at 4420.996 kb on + strand, within OH686_21715 at 4420.996 kb on + strand, within OH686_21715 at 4420.996 kb on + strand, within OH686_21715 at 4420.996 kb on + strand, within OH686_21715 at 4420.996 kb on + strand, within OH686_21715 at 4420.997 kb on - strand, within OH686_21715 at 4421.161 kb on + strand, within OH686_21715 at 4421.161 kb on + strand, within OH686_21715 at 4421.161 kb on + strand, within OH686_21715 at 4421.161 kb on + strand, within OH686_21715 at 4421.161 kb on + strand, within OH686_21715 at 4421.161 kb on + strand, within OH686_21715 at 4421.162 kb on - strand, within OH686_21715 at 4421.162 kb on - strand, within OH686_21715 at 4421.162 kb on - strand, within OH686_21715 at 4421.162 kb on - strand, within OH686_21715 at 4421.162 kb on - strand, within OH686_21715 at 4421.162 kb on - strand, within OH686_21715 at 4421.225 kb on - strand, within OH686_21715 at 4421.329 kb on + strand, within OH686_21715 at 4421.329 kb on + strand, within OH686_21715 at 4421.329 kb on + strand, within OH686_21715 at 4421.329 kb on + strand, within OH686_21715 at 4421.329 kb on + strand, within OH686_21715 at 4421.330 kb on - strand, within OH686_21715 at 4421.330 kb on - strand, within OH686_21715 at 4421.330 kb on - strand, within OH686_21715 at 4421.330 kb on - strand, within OH686_21715 at 4421.330 kb on - strand, within OH686_21715 at 4421.330 kb on - strand, within OH686_21715 at 4421.341 kb on - strand, within OH686_21715 at 4421.401 kb on + strand, within OH686_21715 at 4421.401 kb on + strand, within OH686_21715 at 4421.401 kb on + strand, within OH686_21715 at 4421.401 kb on + strand, within OH686_21715 at 4421.402 kb on - strand, within OH686_21715 at 4421.420 kb on + strand, within OH686_21715 at 4421.420 kb on + strand, within OH686_21715 at 4421.421 kb on - strand, within OH686_21715 at 4421.421 kb on - strand, within OH686_21715 at 4421.567 kb on - strand, within OH686_21715 at 4421.567 kb on - strand, within OH686_21715 at 4421.678 kb on + strand at 4421.678 kb on + strand at 4421.678 kb on + strand at 4421.679 kb on - strand at 4421.679 kb on - strand at 4421.679 kb on - strand at 4421.679 kb on - strand at 4421.679 kb on - strand at 4421.734 kb on + strand at 4421.734 kb on + strand at 4421.734 kb on + strand at 4421.734 kb on + strand at 4421.734 kb on + strand at 4421.734 kb on + strand at 4421.734 kb on + strand at 4421.735 kb on - strand at 4421.735 kb on - strand at 4421.735 kb on - strand at 4421.770 kb on + strand at 4421.770 kb on + strand at 4421.771 kb on - strand at 4421.845 kb on + strand at 4421.845 kb on + strand at 4421.845 kb on + strand at 4421.845 kb on + strand at 4421.845 kb on + strand at 4421.846 kb on - strand at 4421.846 kb on - strand at 4421.946 kb on - strand, within OH686_21720 at 4422.282 kb on + strand, within OH686_21720 at 4422.282 kb on + strand, within OH686_21720 at 4422.283 kb on - strand, within OH686_21720 at 4422.283 kb on - strand, within OH686_21720 at 4422.283 kb on - strand, within OH686_21720 at 4422.283 kb on - strand, within OH686_21720 at 4422.494 kb on + strand at 4422.494 kb on + strand at 4422.495 kb on - strand at 4422.510 kb on + strand, within OH686_21725 at 4422.510 kb on + strand, within OH686_21725 at 4422.580 kb on + strand, within OH686_21725 at 4422.620 kb on + strand, within OH686_21725 at 4422.620 kb on + strand, within OH686_21725 at 4422.621 kb on - strand, within OH686_21725 at 4422.621 kb on - strand, within OH686_21725 at 4422.621 kb on - strand, within OH686_21725 at 4422.684 kb on + strand, within OH686_21725 at 4422.685 kb on - strand, within OH686_21725 at 4422.691 kb on + strand, within OH686_21725 at 4422.692 kb on - strand, within OH686_21725 at 4422.763 kb on + strand, within OH686_21725 at 4422.764 kb on - strand, within OH686_21725 at 4422.826 kb on + strand at 4422.826 kb on + strand at 4422.826 kb on + strand at 4422.826 kb on + strand at 4422.827 kb on - strand at 4422.827 kb on - strand at 4422.827 kb on - strand at 4422.827 kb on - strand at 4422.827 kb on - strand at 4422.827 kb on - strand at 4422.827 kb on - strand at 4422.827 kb on - strand at 4422.827 kb on - strand at 4422.827 kb on - strand at 4422.827 kb on - strand at 4422.956 kb on + strand, within OH686_21730 at 4422.957 kb on - strand, within OH686_21730 at 4422.957 kb on - strand, within OH686_21730 at 4422.957 kb on - strand, within OH686_21730 at 4423.056 kb on + strand, within OH686_21730 at 4423.057 kb on - strand, within OH686_21730 at 4423.106 kb on + strand, within OH686_21730
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 4,420,881 - OH686_21715 0.55 +0.3 4,420,960 + OH686_21715 0.59 -0.6 4,420,996 + OH686_21715 0.61 -1.1 4,420,996 + OH686_21715 0.61 -1.0 4,420,996 + OH686_21715 0.61 +0.7 4,420,996 + OH686_21715 0.61 -1.2 4,420,996 + OH686_21715 0.61 +0.0 4,420,996 + OH686_21715 0.61 +0.6 4,420,996 + OH686_21715 0.61 +0.5 4,420,996 + OH686_21715 0.61 +0.8 4,420,997 - OH686_21715 0.61 +0.2 4,421,161 + OH686_21715 0.68 +0.6 4,421,161 + OH686_21715 0.68 +0.0 4,421,161 + OH686_21715 0.68 -0.2 4,421,161 + OH686_21715 0.68 +0.9 4,421,161 + OH686_21715 0.68 +0.2 4,421,161 + OH686_21715 0.68 -0.6 4,421,162 - OH686_21715 0.68 +0.2 4,421,162 - OH686_21715 0.68 -1.1 4,421,162 - OH686_21715 0.68 +0.5 4,421,162 - OH686_21715 0.68 -2.1 4,421,162 - OH686_21715 0.68 +0.7 4,421,162 - OH686_21715 0.68 +0.2 4,421,225 - OH686_21715 0.71 -0.3 4,421,329 + OH686_21715 0.76 -1.1 4,421,329 + OH686_21715 0.76 -0.2 4,421,329 + OH686_21715 0.76 -0.5 4,421,329 + OH686_21715 0.76 +0.5 4,421,329 + OH686_21715 0.76 -0.3 4,421,330 - OH686_21715 0.76 -0.5 4,421,330 - OH686_21715 0.76 +0.1 4,421,330 - OH686_21715 0.76 -1.3 4,421,330 - OH686_21715 0.76 +0.8 4,421,330 - OH686_21715 0.76 -0.0 4,421,330 - OH686_21715 0.76 -0.7 4,421,341 - OH686_21715 0.77 -0.3 4,421,401 + OH686_21715 0.80 -0.8 4,421,401 + OH686_21715 0.80 +0.7 4,421,401 + OH686_21715 0.80 +0.7 4,421,401 + OH686_21715 0.80 -0.9 4,421,402 - OH686_21715 0.80 -0.1 4,421,420 + OH686_21715 0.81 +0.6 4,421,420 + OH686_21715 0.81 +0.4 4,421,421 - OH686_21715 0.81 -0.2 4,421,421 - OH686_21715 0.81 -0.4 4,421,567 - OH686_21715 0.87 +0.1 4,421,567 - OH686_21715 0.87 +0.3 4,421,678 + +2.2 4,421,678 + +0.2 4,421,678 + +0.6 4,421,679 - +1.9 4,421,679 - -0.9 4,421,679 - +0.3 4,421,679 - -0.7 4,421,679 - +0.5 4,421,734 + -1.4 4,421,734 + -0.2 4,421,734 + +0.9 4,421,734 + +0.3 4,421,734 + +0.1 4,421,734 + -0.3 4,421,734 + +0.5 4,421,735 - +0.3 4,421,735 - +0.5 4,421,735 - +0.2 4,421,770 + +0.3 4,421,770 + +0.9 4,421,771 - +0.4 4,421,845 + -1.1 4,421,845 + +0.5 4,421,845 + -0.3 4,421,845 + -0.4 4,421,845 + -0.8 4,421,846 - +0.4 4,421,846 - +0.2 4,421,946 - OH686_21720 0.18 +0.9 4,422,282 + OH686_21720 0.72 +0.4 4,422,282 + OH686_21720 0.72 +0.4 4,422,283 - OH686_21720 0.72 +0.9 4,422,283 - OH686_21720 0.72 -0.5 4,422,283 - OH686_21720 0.72 +0.4 4,422,283 - OH686_21720 0.72 +0.2 4,422,494 + -0.2 4,422,494 + +0.4 4,422,495 - -0.4 4,422,510 + OH686_21725 0.13 +0.3 4,422,510 + OH686_21725 0.13 +0.4 4,422,580 + OH686_21725 0.32 -0.1 4,422,620 + OH686_21725 0.44 +0.0 4,422,620 + OH686_21725 0.44 -1.3 4,422,621 - OH686_21725 0.44 +0.7 4,422,621 - OH686_21725 0.44 -0.6 4,422,621 - OH686_21725 0.44 +0.2 4,422,684 + OH686_21725 0.62 -0.1 4,422,685 - OH686_21725 0.62 -0.2 4,422,691 + OH686_21725 0.64 +0.4 4,422,692 - OH686_21725 0.64 +0.2 4,422,763 + OH686_21725 0.84 -2.5 4,422,764 - OH686_21725 0.84 +0.8 4,422,826 + +1.0 4,422,826 + -0.5 4,422,826 + +0.4 4,422,826 + +0.6 4,422,827 - +0.7 4,422,827 - +0.0 4,422,827 - -0.5 4,422,827 - -0.1 4,422,827 - -0.2 4,422,827 - +0.9 4,422,827 - +0.4 4,422,827 - -0.0 4,422,827 - -0.4 4,422,827 - -1.1 4,422,827 - +0.1 4,422,956 + OH686_21730 0.14 +0.5 4,422,957 - OH686_21730 0.14 +0.7 4,422,957 - OH686_21730 0.14 +1.6 4,422,957 - OH686_21730 0.14 -0.8 4,423,056 + OH686_21730 0.24 -1.0 4,423,057 - OH686_21730 0.24 -0.3 4,423,106 + OH686_21730 0.29 -0.5
Or see this region's nucleotide sequence