Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_21460 and OH686_21465 overlap by 4 nucleotides OH686_21465 and OH686_21470 overlap by 4 nucleotides OH686_21470 and OH686_21475 overlap by 8 nucleotides
OH686_21460: OH686_21460 - Superfamily II DNA/RNA , SNF2 family, at 4,384,444 to 4,387,062
_21460
OH686_21465: OH686_21465 - hypothetical protein, at 4,387,059 to 4,387,295
_21465
OH686_21470: OH686_21470 - Alginate biosynthesis transcriptional activator, at 4,387,292 to 4,387,666
_21470
OH686_21475: OH686_21475 - DNA recombination-dependent growth factor RdgC, at 4,387,659 to 4,388,903
_21475
Position (kb)
4387
4388 Strain fitness (log2 ratio)
-1
0
1 at 4386.381 kb on + strand, within OH686_21460 at 4386.381 kb on + strand, within OH686_21460 at 4386.381 kb on + strand, within OH686_21460 at 4386.479 kb on + strand, within OH686_21460 at 4386.480 kb on - strand, within OH686_21460 at 4386.493 kb on + strand, within OH686_21460 at 4386.493 kb on + strand, within OH686_21460 at 4386.493 kb on + strand, within OH686_21460 at 4386.493 kb on + strand, within OH686_21460 at 4386.493 kb on + strand, within OH686_21460 at 4386.493 kb on + strand, within OH686_21460 at 4386.493 kb on + strand, within OH686_21460 at 4386.494 kb on - strand, within OH686_21460 at 4386.494 kb on - strand, within OH686_21460 at 4386.494 kb on - strand, within OH686_21460 at 4386.494 kb on - strand, within OH686_21460 at 4386.494 kb on - strand, within OH686_21460 at 4386.494 kb on - strand, within OH686_21460 at 4386.494 kb on - strand, within OH686_21460 at 4386.497 kb on + strand, within OH686_21460 at 4386.497 kb on + strand, within OH686_21460 at 4386.497 kb on + strand, within OH686_21460 at 4386.497 kb on + strand, within OH686_21460 at 4386.497 kb on + strand, within OH686_21460 at 4386.497 kb on + strand, within OH686_21460 at 4386.498 kb on - strand, within OH686_21460 at 4386.498 kb on - strand, within OH686_21460 at 4386.498 kb on - strand, within OH686_21460 at 4386.498 kb on - strand, within OH686_21460 at 4386.498 kb on - strand, within OH686_21460 at 4386.498 kb on - strand, within OH686_21460 at 4386.498 kb on - strand, within OH686_21460 at 4386.498 kb on - strand, within OH686_21460 at 4386.498 kb on - strand, within OH686_21460 at 4386.632 kb on - strand, within OH686_21460 at 4386.632 kb on - strand, within OH686_21460 at 4386.704 kb on + strand, within OH686_21460 at 4386.704 kb on + strand, within OH686_21460 at 4386.704 kb on + strand, within OH686_21460 at 4386.705 kb on - strand, within OH686_21460 at 4386.716 kb on + strand, within OH686_21460 at 4386.716 kb on + strand, within OH686_21460 at 4386.716 kb on + strand, within OH686_21460 at 4386.716 kb on + strand, within OH686_21460 at 4386.716 kb on + strand, within OH686_21460 at 4386.716 kb on + strand, within OH686_21460 at 4386.717 kb on - strand, within OH686_21460 at 4386.717 kb on - strand, within OH686_21460 at 4386.828 kb on + strand at 4386.828 kb on + strand at 4386.828 kb on + strand at 4386.880 kb on + strand at 4386.880 kb on + strand at 4386.881 kb on - strand at 4386.881 kb on - strand at 4386.881 kb on - strand at 4387.138 kb on + strand, within OH686_21465 at 4387.139 kb on - strand, within OH686_21465 at 4387.159 kb on + strand, within OH686_21465 at 4387.160 kb on - strand, within OH686_21465 at 4387.203 kb on - strand, within OH686_21465 at 4387.419 kb on + strand, within OH686_21470 at 4387.419 kb on + strand, within OH686_21470 at 4387.420 kb on - strand, within OH686_21470 at 4387.420 kb on - strand, within OH686_21470 at 4387.483 kb on + strand, within OH686_21470 at 4387.577 kb on - strand, within OH686_21470 at 4387.753 kb on + strand at 4387.753 kb on + strand at 4387.753 kb on + strand at 4387.754 kb on - strand at 4387.831 kb on + strand, within OH686_21475 at 4387.832 kb on - strand, within OH686_21475 at 4387.832 kb on - strand, within OH686_21475 at 4387.832 kb on - strand, within OH686_21475 at 4387.851 kb on - strand, within OH686_21475 at 4388.605 kb on + strand, within OH686_21475 at 4388.605 kb on + strand, within OH686_21475
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 4,386,381 + OH686_21460 0.74 -0.3 4,386,381 + OH686_21460 0.74 -0.5 4,386,381 + OH686_21460 0.74 -0.2 4,386,479 + OH686_21460 0.78 -1.2 4,386,480 - OH686_21460 0.78 -0.6 4,386,493 + OH686_21460 0.78 -0.4 4,386,493 + OH686_21460 0.78 +0.1 4,386,493 + OH686_21460 0.78 +0.2 4,386,493 + OH686_21460 0.78 -0.3 4,386,493 + OH686_21460 0.78 +0.4 4,386,493 + OH686_21460 0.78 -1.6 4,386,493 + OH686_21460 0.78 -0.3 4,386,494 - OH686_21460 0.78 +0.0 4,386,494 - OH686_21460 0.78 +0.6 4,386,494 - OH686_21460 0.78 -0.3 4,386,494 - OH686_21460 0.78 +0.7 4,386,494 - OH686_21460 0.78 -1.7 4,386,494 - OH686_21460 0.78 +0.1 4,386,494 - OH686_21460 0.78 -0.6 4,386,497 + OH686_21460 0.78 -0.7 4,386,497 + OH686_21460 0.78 -0.1 4,386,497 + OH686_21460 0.78 -0.2 4,386,497 + OH686_21460 0.78 -0.2 4,386,497 + OH686_21460 0.78 +0.1 4,386,497 + OH686_21460 0.78 +0.2 4,386,498 - OH686_21460 0.78 +0.2 4,386,498 - OH686_21460 0.78 +0.3 4,386,498 - OH686_21460 0.78 -1.2 4,386,498 - OH686_21460 0.78 +0.3 4,386,498 - OH686_21460 0.78 -0.4 4,386,498 - OH686_21460 0.78 -0.0 4,386,498 - OH686_21460 0.78 -0.5 4,386,498 - OH686_21460 0.78 +0.1 4,386,498 - OH686_21460 0.78 +0.2 4,386,632 - OH686_21460 0.84 +0.2 4,386,632 - OH686_21460 0.84 -1.0 4,386,704 + OH686_21460 0.86 +0.0 4,386,704 + OH686_21460 0.86 -0.2 4,386,704 + OH686_21460 0.86 -0.2 4,386,705 - OH686_21460 0.86 -0.5 4,386,716 + OH686_21460 0.87 -0.1 4,386,716 + OH686_21460 0.87 -0.7 4,386,716 + OH686_21460 0.87 -0.5 4,386,716 + OH686_21460 0.87 +0.3 4,386,716 + OH686_21460 0.87 +0.3 4,386,716 + OH686_21460 0.87 +0.0 4,386,717 - OH686_21460 0.87 +0.3 4,386,717 - OH686_21460 0.87 +0.3 4,386,828 + -0.5 4,386,828 + +0.6 4,386,828 + +0.3 4,386,880 + +0.7 4,386,880 + +0.4 4,386,881 - +0.4 4,386,881 - -1.5 4,386,881 - -1.3 4,387,138 + OH686_21465 0.33 -0.5 4,387,139 - OH686_21465 0.34 +0.0 4,387,159 + OH686_21465 0.42 -0.1 4,387,160 - OH686_21465 0.43 +0.1 4,387,203 - OH686_21465 0.61 -0.7 4,387,419 + OH686_21470 0.34 +0.9 4,387,419 + OH686_21470 0.34 +0.1 4,387,420 - OH686_21470 0.34 -0.3 4,387,420 - OH686_21470 0.34 +1.3 4,387,483 + OH686_21470 0.51 -1.0 4,387,577 - OH686_21470 0.76 +0.5 4,387,753 + +0.1 4,387,753 + -0.5 4,387,753 + +0.7 4,387,754 - -0.3 4,387,831 + OH686_21475 0.14 +0.3 4,387,832 - OH686_21475 0.14 +0.4 4,387,832 - OH686_21475 0.14 -1.0 4,387,832 - OH686_21475 0.14 -0.8 4,387,851 - OH686_21475 0.15 -0.5 4,388,605 + OH686_21475 0.76 +0.3 4,388,605 + OH686_21475 0.76 +0.7
Or see this region's nucleotide sequence