Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_21360 and OH686_21365 are separated by 61 nucleotides OH686_21365 and OH686_21370 are separated by 450 nucleotides OH686_21370 and OH686_21375 are separated by 273 nucleotides OH686_21375 and OH686_21380 are separated by 133 nucleotides OH686_21380 and OH686_21385 overlap by 13 nucleotides
OH686_21360: OH686_21360 - magnesium transporter, at 4,374,334 to 4,375,776
_21360
OH686_21365: OH686_21365 - Alginate biosynthesis transcriptional activator, at 4,375,838 to 4,376,155
_21365
OH686_21370: OH686_21370 - tRNA-Arg, at 4,376,606 to 4,376,682
_21370
OH686_21375: OH686_21375 - hypothetical protein, at 4,376,956 to 4,377,225
_21375
OH686_21380: OH686_21380 - hypothetical protein, at 4,377,359 to 4,377,610
_21380
OH686_21385: OH686_21385 - hypothetical protein, at 4,377,598 to 4,377,918
_21385
Position (kb) 4376
4377 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4375.815 kb on + strand at 4375.886 kb on + strand, within OH686_21365 at 4375.886 kb on + strand, within OH686_21365 at 4375.886 kb on + strand, within OH686_21365 at 4375.886 kb on + strand, within OH686_21365 at 4375.886 kb on + strand, within OH686_21365 at 4375.886 kb on + strand, within OH686_21365 at 4375.886 kb on + strand, within OH686_21365 at 4375.887 kb on - strand, within OH686_21365 at 4375.887 kb on - strand, within OH686_21365 at 4375.887 kb on - strand, within OH686_21365 at 4375.887 kb on - strand, within OH686_21365 at 4375.887 kb on - strand, within OH686_21365 at 4375.887 kb on - strand, within OH686_21365 at 4375.887 kb on - strand, within OH686_21365 at 4375.887 kb on - strand, within OH686_21365 at 4375.887 kb on - strand, within OH686_21365 at 4375.887 kb on - strand, within OH686_21365 at 4375.952 kb on + strand, within OH686_21365 at 4375.952 kb on + strand, within OH686_21365 at 4375.952 kb on + strand, within OH686_21365 at 4375.952 kb on + strand, within OH686_21365 at 4375.952 kb on + strand, within OH686_21365 at 4375.953 kb on - strand, within OH686_21365 at 4375.953 kb on - strand, within OH686_21365 at 4375.953 kb on - strand, within OH686_21365 at 4376.063 kb on - strand, within OH686_21365 at 4376.092 kb on + strand, within OH686_21365 at 4376.093 kb on - strand, within OH686_21365 at 4376.093 kb on - strand, within OH686_21365 at 4376.111 kb on + strand, within OH686_21365 at 4376.111 kb on + strand, within OH686_21365 at 4376.111 kb on + strand, within OH686_21365 at 4376.139 kb on + strand at 4376.139 kb on + strand at 4376.139 kb on + strand at 4376.139 kb on + strand at 4376.139 kb on + strand at 4376.140 kb on - strand at 4376.140 kb on - strand at 4376.140 kb on - strand at 4376.140 kb on - strand at 4376.162 kb on + strand at 4376.163 kb on - strand at 4376.163 kb on - strand at 4376.164 kb on + strand at 4376.164 kb on + strand at 4376.164 kb on + strand at 4376.164 kb on + strand at 4376.164 kb on + strand at 4376.164 kb on + strand at 4376.165 kb on - strand at 4376.165 kb on - strand at 4376.165 kb on - strand at 4376.165 kb on - strand at 4376.165 kb on - strand at 4376.165 kb on - strand at 4376.165 kb on - strand at 4376.169 kb on + strand at 4376.169 kb on + strand at 4376.170 kb on - strand at 4376.178 kb on + strand at 4376.290 kb on + strand at 4376.291 kb on - strand at 4376.304 kb on + strand at 4376.313 kb on + strand at 4376.313 kb on + strand at 4376.313 kb on + strand at 4376.314 kb on - strand at 4376.314 kb on - strand at 4376.314 kb on - strand at 4376.314 kb on - strand at 4376.314 kb on - strand at 4376.365 kb on + strand at 4376.372 kb on - strand at 4376.372 kb on - strand at 4376.372 kb on - strand at 4376.397 kb on - strand at 4376.399 kb on - strand at 4376.423 kb on + strand at 4376.423 kb on + strand at 4376.424 kb on - strand at 4376.497 kb on - strand at 4376.497 kb on - strand at 4376.613 kb on + strand at 4376.614 kb on - strand, within OH686_21370 at 4376.614 kb on - strand, within OH686_21370 at 4376.626 kb on + strand, within OH686_21370 at 4376.626 kb on + strand, within OH686_21370 at 4376.642 kb on + strand, within OH686_21370 at 4376.642 kb on + strand, within OH686_21370 at 4376.643 kb on - strand, within OH686_21370 at 4376.643 kb on - strand, within OH686_21370 at 4376.687 kb on + strand at 4376.687 kb on + strand at 4376.687 kb on + strand at 4376.687 kb on + strand at 4376.687 kb on + strand at 4376.687 kb on + strand at 4376.687 kb on + strand at 4376.687 kb on + strand at 4376.687 kb on + strand at 4376.687 kb on + strand at 4376.688 kb on - strand at 4376.688 kb on - strand at 4376.688 kb on - strand at 4376.688 kb on - strand at 4376.688 kb on - strand at 4376.688 kb on - strand at 4376.688 kb on - strand at 4376.688 kb on - strand at 4376.904 kb on + strand at 4376.905 kb on - strand at 4376.908 kb on + strand at 4376.908 kb on + strand at 4376.908 kb on + strand at 4376.908 kb on + strand at 4376.908 kb on + strand at 4376.909 kb on - strand at 4376.909 kb on - strand at 4376.909 kb on - strand at 4376.909 kb on - strand at 4376.909 kb on - strand at 4376.909 kb on - strand at 4376.909 kb on - strand at 4376.909 kb on - strand at 4376.954 kb on + strand at 4376.954 kb on + strand at 4377.254 kb on + strand at 4377.254 kb on + strand at 4377.254 kb on + strand at 4377.254 kb on + strand at 4377.345 kb on + strand at 4377.345 kb on + strand at 4377.345 kb on + strand at 4377.360 kb on + strand at 4377.394 kb on + strand, within OH686_21380 at 4377.394 kb on + strand, within OH686_21380 at 4377.394 kb on + strand, within OH686_21380 at 4377.394 kb on + strand, within OH686_21380 at 4377.438 kb on + strand, within OH686_21380 at 4377.507 kb on + strand, within OH686_21380 at 4377.507 kb on + strand, within OH686_21380 at 4377.610 kb on + strand at 4377.610 kb on + strand at 4377.610 kb on + strand at 4377.610 kb on + strand at 4377.610 kb on + strand at 4377.610 kb on + strand at 4377.610 kb on + strand at 4377.610 kb on + strand at 4377.610 kb on + strand at 4377.610 kb on + strand at 4377.610 kb on + strand at 4377.610 kb on + strand at 4377.610 kb on + strand at 4377.611 kb on - strand at 4377.611 kb on - strand at 4377.611 kb on - strand at 4377.611 kb on - strand at 4377.677 kb on + strand, within OH686_21385 at 4377.677 kb on + strand, within OH686_21385 at 4377.677 kb on + strand, within OH686_21385 at 4377.677 kb on + strand, within OH686_21385 at 4377.677 kb on + strand, within OH686_21385 at 4377.677 kb on + strand, within OH686_21385 at 4377.677 kb on + strand, within OH686_21385 at 4377.678 kb on - strand, within OH686_21385 at 4377.678 kb on - strand, within OH686_21385
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 4,375,815 + +0.3 4,375,886 + OH686_21365 0.15 +0.3 4,375,886 + OH686_21365 0.15 +0.4 4,375,886 + OH686_21365 0.15 -1.3 4,375,886 + OH686_21365 0.15 -1.3 4,375,886 + OH686_21365 0.15 +0.4 4,375,886 + OH686_21365 0.15 +0.6 4,375,886 + OH686_21365 0.15 -0.2 4,375,887 - OH686_21365 0.15 +0.2 4,375,887 - OH686_21365 0.15 +0.0 4,375,887 - OH686_21365 0.15 -0.6 4,375,887 - OH686_21365 0.15 -1.3 4,375,887 - OH686_21365 0.15 -1.1 4,375,887 - OH686_21365 0.15 -1.0 4,375,887 - OH686_21365 0.15 +0.9 4,375,887 - OH686_21365 0.15 -1.1 4,375,887 - OH686_21365 0.15 +1.2 4,375,887 - OH686_21365 0.15 -0.1 4,375,952 + OH686_21365 0.36 -1.1 4,375,952 + OH686_21365 0.36 +0.4 4,375,952 + OH686_21365 0.36 +1.0 4,375,952 + OH686_21365 0.36 +0.2 4,375,952 + OH686_21365 0.36 +0.2 4,375,953 - OH686_21365 0.36 -0.2 4,375,953 - OH686_21365 0.36 +0.2 4,375,953 - OH686_21365 0.36 -0.2 4,376,063 - OH686_21365 0.71 -0.2 4,376,092 + OH686_21365 0.80 +0.6 4,376,093 - OH686_21365 0.80 -0.2 4,376,093 - OH686_21365 0.80 -0.1 4,376,111 + OH686_21365 0.86 +1.1 4,376,111 + OH686_21365 0.86 +0.9 4,376,111 + OH686_21365 0.86 +0.3 4,376,139 + +0.2 4,376,139 + +0.3 4,376,139 + +1.7 4,376,139 + +0.5 4,376,139 + +0.0 4,376,140 - +0.7 4,376,140 - +0.5 4,376,140 - +2.0 4,376,140 - +0.8 4,376,162 + +1.0 4,376,163 - +0.6 4,376,163 - -0.6 4,376,164 + +0.1 4,376,164 + -0.2 4,376,164 + -0.5 4,376,164 + -0.5 4,376,164 + -1.4 4,376,164 + +0.4 4,376,165 - +0.7 4,376,165 - -0.1 4,376,165 - -0.5 4,376,165 - -0.3 4,376,165 - +1.1 4,376,165 - +0.1 4,376,165 - +0.9 4,376,169 + -2.2 4,376,169 + -0.6 4,376,170 - +0.3 4,376,178 + +0.9 4,376,290 + +1.5 4,376,291 - -0.4 4,376,304 + -0.1 4,376,313 + -1.0 4,376,313 + -0.3 4,376,313 + +0.5 4,376,314 - -0.7 4,376,314 - -0.1 4,376,314 - -0.4 4,376,314 - -0.2 4,376,314 - -0.8 4,376,365 + -1.1 4,376,372 - +0.2 4,376,372 - -0.1 4,376,372 - -2.0 4,376,397 - -0.8 4,376,399 - -0.1 4,376,423 + +0.8 4,376,423 + -0.2 4,376,424 - +0.3 4,376,497 - -0.1 4,376,497 - -0.5 4,376,613 + -0.1 4,376,614 - OH686_21370 0.10 +0.1 4,376,614 - OH686_21370 0.10 +0.9 4,376,626 + OH686_21370 0.26 +0.9 4,376,626 + OH686_21370 0.26 +1.2 4,376,642 + OH686_21370 0.47 +0.7 4,376,642 + OH686_21370 0.47 +0.3 4,376,643 - OH686_21370 0.48 -0.3 4,376,643 - OH686_21370 0.48 -0.3 4,376,687 + +0.1 4,376,687 + -0.6 4,376,687 + +0.3 4,376,687 + +0.2 4,376,687 + -0.3 4,376,687 + -0.8 4,376,687 + -0.4 4,376,687 + -0.2 4,376,687 + -0.7 4,376,687 + +0.6 4,376,688 - -0.2 4,376,688 - -0.5 4,376,688 - -0.4 4,376,688 - +0.5 4,376,688 - +0.6 4,376,688 - +0.5 4,376,688 - -1.3 4,376,688 - -0.9 4,376,904 + -0.0 4,376,905 - -0.7 4,376,908 + +0.1 4,376,908 + -0.3 4,376,908 + -1.7 4,376,908 + +0.4 4,376,908 + -0.3 4,376,909 - +0.2 4,376,909 - -0.3 4,376,909 - +0.1 4,376,909 - +0.3 4,376,909 - +0.8 4,376,909 - -1.8 4,376,909 - -0.4 4,376,909 - +0.0 4,376,954 + +0.3 4,376,954 + -0.7 4,377,254 + -0.4 4,377,254 + +0.2 4,377,254 + -1.4 4,377,254 + +0.4 4,377,345 + -0.1 4,377,345 + -0.6 4,377,345 + +0.7 4,377,360 + -0.2 4,377,394 + OH686_21380 0.14 -0.4 4,377,394 + OH686_21380 0.14 +0.4 4,377,394 + OH686_21380 0.14 -0.4 4,377,394 + OH686_21380 0.14 -0.7 4,377,438 + OH686_21380 0.31 -0.1 4,377,507 + OH686_21380 0.59 +1.3 4,377,507 + OH686_21380 0.59 -0.8 4,377,610 + -1.1 4,377,610 + +0.4 4,377,610 + -0.2 4,377,610 + -0.1 4,377,610 + -1.1 4,377,610 + +0.6 4,377,610 + -0.4 4,377,610 + -0.3 4,377,610 + +0.7 4,377,610 + +0.1 4,377,610 + -0.6 4,377,610 + +0.2 4,377,610 + -0.7 4,377,611 - +0.2 4,377,611 - -1.1 4,377,611 - +2.0 4,377,611 - +0.7 4,377,677 + OH686_21385 0.25 +0.2 4,377,677 + OH686_21385 0.25 -0.1 4,377,677 + OH686_21385 0.25 +0.3 4,377,677 + OH686_21385 0.25 +0.2 4,377,677 + OH686_21385 0.25 +0.3 4,377,677 + OH686_21385 0.25 -0.3 4,377,677 + OH686_21385 0.25 +0.2 4,377,678 - OH686_21385 0.25 +0.4 4,377,678 - OH686_21385 0.25 +1.4
Or see this region's nucleotide sequence