Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_20365 and OH686_20370 are separated by 166 nucleotides OH686_20370 and OH686_20375 are separated by 45 nucleotides OH686_20375 and OH686_20380 are separated by 39 nucleotides OH686_20380 and OH686_20385 overlap by 4 nucleotides
OH686_20365: OH686_20365 - Glycerol-3-phosphate regulon repressor GlpR, at 4,159,610 to 4,160,368
_20365
OH686_20370: OH686_20370 - Cys-tRNA(Pro) deacylase YbaK, at 4,160,535 to 4,161,005
_20370
OH686_20375: OH686_20375 - glycerol kinase, at 4,161,051 to 4,162,538
_20375
OH686_20380: OH686_20380 - hypothetical protein, at 4,162,578 to 4,163,360
_20380
OH686_20385: OH686_20385 - hypothetical protein, at 4,163,357 to 4,163,791
_20385
Position (kb) 4161
4162
4163 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4160.091 kb on + strand, within OH686_20365 at 4160.091 kb on + strand, within OH686_20365 at 4160.092 kb on - strand, within OH686_20365 at 4160.092 kb on - strand, within OH686_20365 at 4160.092 kb on - strand, within OH686_20365 at 4160.167 kb on - strand, within OH686_20365 at 4160.306 kb on - strand at 4160.313 kb on + strand at 4160.313 kb on + strand at 4160.314 kb on - strand at 4160.314 kb on - strand at 4160.398 kb on + strand at 4160.398 kb on + strand at 4160.398 kb on + strand at 4160.398 kb on + strand at 4160.398 kb on + strand at 4160.399 kb on - strand at 4160.399 kb on - strand at 4160.399 kb on - strand at 4160.399 kb on - strand at 4160.399 kb on - strand at 4160.399 kb on - strand at 4160.399 kb on - strand at 4160.399 kb on - strand at 4160.399 kb on - strand at 4160.399 kb on - strand at 4160.400 kb on + strand at 4160.400 kb on + strand at 4160.400 kb on + strand at 4160.400 kb on + strand at 4160.400 kb on + strand at 4160.401 kb on - strand at 4160.401 kb on - strand at 4160.401 kb on - strand at 4160.428 kb on + strand at 4160.428 kb on + strand at 4160.429 kb on - strand at 4160.502 kb on - strand at 4160.502 kb on - strand at 4160.502 kb on - strand at 4160.502 kb on - strand at 4160.502 kb on - strand at 4160.502 kb on - strand at 4160.592 kb on + strand, within OH686_20370 at 4160.593 kb on - strand, within OH686_20370 at 4160.619 kb on + strand, within OH686_20370 at 4160.619 kb on + strand, within OH686_20370 at 4160.619 kb on + strand, within OH686_20370 at 4160.620 kb on - strand, within OH686_20370 at 4160.620 kb on - strand, within OH686_20370 at 4160.665 kb on + strand, within OH686_20370 at 4161.032 kb on + strand at 4161.032 kb on + strand at 4161.032 kb on + strand at 4161.032 kb on + strand at 4161.032 kb on + strand at 4161.032 kb on + strand at 4161.033 kb on - strand at 4161.033 kb on - strand at 4161.060 kb on + strand at 4161.060 kb on + strand at 4161.060 kb on + strand at 4161.061 kb on - strand at 4161.061 kb on - strand at 4161.159 kb on + strand at 4161.159 kb on + strand at 4161.159 kb on + strand at 4161.378 kb on + strand, within OH686_20375 at 4161.379 kb on - strand, within OH686_20375 at 4161.379 kb on - strand, within OH686_20375 at 4161.450 kb on + strand, within OH686_20375 at 4161.450 kb on + strand, within OH686_20375 at 4161.450 kb on + strand, within OH686_20375 at 4161.450 kb on + strand, within OH686_20375 at 4161.450 kb on + strand, within OH686_20375 at 4161.451 kb on - strand, within OH686_20375 at 4161.451 kb on - strand, within OH686_20375 at 4161.451 kb on - strand, within OH686_20375 at 4161.451 kb on - strand, within OH686_20375 at 4161.451 kb on - strand, within OH686_20375 at 4161.451 kb on - strand, within OH686_20375 at 4161.451 kb on - strand, within OH686_20375 at 4161.833 kb on + strand, within OH686_20375 at 4161.833 kb on + strand, within OH686_20375 at 4161.833 kb on + strand, within OH686_20375 at 4161.834 kb on - strand, within OH686_20375 at 4161.834 kb on - strand, within OH686_20375 at 4161.834 kb on - strand, within OH686_20375 at 4161.834 kb on - strand, within OH686_20375 at 4161.837 kb on + strand, within OH686_20375 at 4161.837 kb on + strand, within OH686_20375 at 4161.837 kb on + strand, within OH686_20375 at 4161.942 kb on + strand, within OH686_20375 at 4161.942 kb on + strand, within OH686_20375 at 4161.942 kb on + strand, within OH686_20375 at 4161.942 kb on + strand, within OH686_20375 at 4161.942 kb on + strand, within OH686_20375 at 4161.942 kb on + strand, within OH686_20375 at 4161.943 kb on - strand, within OH686_20375 at 4161.943 kb on - strand, within OH686_20375 at 4161.943 kb on - strand, within OH686_20375 at 4162.071 kb on + strand, within OH686_20375 at 4162.071 kb on + strand, within OH686_20375 at 4162.071 kb on + strand, within OH686_20375 at 4162.071 kb on + strand, within OH686_20375 at 4162.072 kb on - strand, within OH686_20375 at 4162.200 kb on + strand, within OH686_20375 at 4162.200 kb on + strand, within OH686_20375 at 4162.201 kb on - strand, within OH686_20375 at 4162.201 kb on - strand, within OH686_20375 at 4162.377 kb on + strand, within OH686_20375 at 4162.378 kb on - strand, within OH686_20375 at 4162.491 kb on + strand at 4162.544 kb on + strand at 4162.544 kb on + strand at 4162.544 kb on + strand at 4162.544 kb on + strand at 4162.544 kb on + strand at 4162.544 kb on + strand at 4162.544 kb on + strand at 4162.545 kb on - strand at 4162.545 kb on - strand at 4162.545 kb on - strand at 4162.545 kb on - strand at 4162.545 kb on - strand at 4162.754 kb on + strand, within OH686_20380 at 4162.755 kb on - strand, within OH686_20380 at 4162.755 kb on - strand, within OH686_20380 at 4162.923 kb on + strand, within OH686_20380 at 4162.924 kb on - strand, within OH686_20380 at 4162.924 kb on - strand, within OH686_20380 at 4163.001 kb on + strand, within OH686_20380 at 4163.001 kb on + strand, within OH686_20380 at 4163.001 kb on + strand, within OH686_20380 at 4163.001 kb on + strand, within OH686_20380 at 4163.001 kb on + strand, within OH686_20380 at 4163.001 kb on + strand, within OH686_20380 at 4163.001 kb on + strand, within OH686_20380 at 4163.001 kb on + strand, within OH686_20380 at 4163.001 kb on + strand, within OH686_20380 at 4163.001 kb on + strand, within OH686_20380 at 4163.001 kb on + strand, within OH686_20380 at 4163.001 kb on + strand, within OH686_20380 at 4163.001 kb on + strand, within OH686_20380 at 4163.001 kb on + strand, within OH686_20380 at 4163.002 kb on - strand, within OH686_20380 at 4163.002 kb on - strand, within OH686_20380 at 4163.002 kb on - strand, within OH686_20380 at 4163.002 kb on - strand, within OH686_20380 at 4163.002 kb on - strand, within OH686_20380 at 4163.002 kb on - strand, within OH686_20380 at 4163.007 kb on + strand, within OH686_20380 at 4163.007 kb on + strand, within OH686_20380 at 4163.008 kb on - strand, within OH686_20380 at 4163.008 kb on - strand, within OH686_20380 at 4163.028 kb on + strand, within OH686_20380 at 4163.028 kb on + strand, within OH686_20380 at 4163.028 kb on + strand, within OH686_20380 at 4163.028 kb on + strand, within OH686_20380 at 4163.028 kb on + strand, within OH686_20380 at 4163.028 kb on + strand, within OH686_20380 at 4163.028 kb on + strand, within OH686_20380 at 4163.028 kb on + strand, within OH686_20380 at 4163.029 kb on - strand, within OH686_20380 at 4163.029 kb on - strand, within OH686_20380 at 4163.029 kb on - strand, within OH686_20380 at 4163.029 kb on - strand, within OH686_20380 at 4163.029 kb on - strand, within OH686_20380 at 4163.029 kb on - strand, within OH686_20380 at 4163.029 kb on - strand, within OH686_20380 at 4163.029 kb on - strand, within OH686_20380 at 4163.029 kb on - strand, within OH686_20380 at 4163.191 kb on + strand, within OH686_20380 at 4163.191 kb on + strand, within OH686_20380 at 4163.192 kb on - strand, within OH686_20380 at 4163.229 kb on + strand, within OH686_20380 at 4163.229 kb on + strand, within OH686_20380 at 4163.229 kb on + strand, within OH686_20380 at 4163.229 kb on + strand, within OH686_20380 at 4163.229 kb on + strand, within OH686_20380 at 4163.230 kb on - strand, within OH686_20380 at 4163.230 kb on - strand, within OH686_20380 at 4163.230 kb on - strand, within OH686_20380 at 4163.268 kb on + strand, within OH686_20380 at 4163.268 kb on + strand, within OH686_20380 at 4163.269 kb on - strand, within OH686_20380 at 4163.301 kb on + strand at 4163.340 kb on + strand at 4163.340 kb on + strand at 4163.340 kb on + strand at 4163.340 kb on + strand at 4163.341 kb on - strand at 4163.385 kb on + strand at 4163.385 kb on + strand at 4163.385 kb on + strand at 4163.385 kb on + strand at 4163.385 kb on + strand at 4163.386 kb on - strand at 4163.386 kb on - strand at 4163.454 kb on + strand, within OH686_20385 at 4163.454 kb on + strand, within OH686_20385 at 4163.454 kb on + strand, within OH686_20385 at 4163.454 kb on + strand, within OH686_20385 at 4163.454 kb on + strand, within OH686_20385 at 4163.454 kb on + strand, within OH686_20385 at 4163.455 kb on - strand, within OH686_20385 at 4163.455 kb on - strand, within OH686_20385 at 4163.455 kb on - strand, within OH686_20385 at 4163.455 kb on - strand, within OH686_20385 at 4163.455 kb on - strand, within OH686_20385 at 4163.455 kb on - strand, within OH686_20385
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 4,160,091 + OH686_20365 0.63 -0.9 4,160,091 + OH686_20365 0.63 -1.1 4,160,092 - OH686_20365 0.64 -0.8 4,160,092 - OH686_20365 0.64 -1.3 4,160,092 - OH686_20365 0.64 +0.5 4,160,167 - OH686_20365 0.73 -1.1 4,160,306 - -0.0 4,160,313 + -0.9 4,160,313 + -0.5 4,160,314 - -0.8 4,160,314 - -0.1 4,160,398 + -1.1 4,160,398 + -2.0 4,160,398 + -0.3 4,160,398 + -1.2 4,160,398 + -0.4 4,160,399 - +0.2 4,160,399 - +0.3 4,160,399 - -0.4 4,160,399 - -0.9 4,160,399 - -1.0 4,160,399 - -0.3 4,160,399 - -2.0 4,160,399 - -0.9 4,160,399 - +0.2 4,160,399 - -0.2 4,160,400 + -0.8 4,160,400 + -1.6 4,160,400 + -1.0 4,160,400 + -1.4 4,160,400 + -0.7 4,160,401 - -0.6 4,160,401 - -0.1 4,160,401 - -0.0 4,160,428 + -0.7 4,160,428 + -0.3 4,160,429 - +0.8 4,160,502 - -0.1 4,160,502 - +0.3 4,160,502 - -0.8 4,160,502 - -1.0 4,160,502 - +1.1 4,160,502 - -0.1 4,160,592 + OH686_20370 0.12 +0.4 4,160,593 - OH686_20370 0.12 -2.3 4,160,619 + OH686_20370 0.18 -0.6 4,160,619 + OH686_20370 0.18 -0.6 4,160,619 + OH686_20370 0.18 -0.6 4,160,620 - OH686_20370 0.18 +0.1 4,160,620 - OH686_20370 0.18 -0.1 4,160,665 + OH686_20370 0.28 -0.4 4,161,032 + +0.1 4,161,032 + -1.2 4,161,032 + -0.1 4,161,032 + -0.8 4,161,032 + -0.7 4,161,032 + -1.4 4,161,033 - +1.0 4,161,033 - +0.3 4,161,060 + +0.7 4,161,060 + +1.1 4,161,060 + -0.3 4,161,061 - +0.1 4,161,061 - +0.7 4,161,159 + -1.7 4,161,159 + +0.7 4,161,159 + -0.0 4,161,378 + OH686_20375 0.22 +0.1 4,161,379 - OH686_20375 0.22 +0.4 4,161,379 - OH686_20375 0.22 -1.4 4,161,450 + OH686_20375 0.27 +0.2 4,161,450 + OH686_20375 0.27 -0.4 4,161,450 + OH686_20375 0.27 +0.5 4,161,450 + OH686_20375 0.27 +1.4 4,161,450 + OH686_20375 0.27 -0.9 4,161,451 - OH686_20375 0.27 +0.4 4,161,451 - OH686_20375 0.27 -1.0 4,161,451 - OH686_20375 0.27 -0.6 4,161,451 - OH686_20375 0.27 +1.2 4,161,451 - OH686_20375 0.27 -0.0 4,161,451 - OH686_20375 0.27 +1.0 4,161,451 - OH686_20375 0.27 -0.3 4,161,833 + OH686_20375 0.53 +1.5 4,161,833 + OH686_20375 0.53 -0.4 4,161,833 + OH686_20375 0.53 +2.6 4,161,834 - OH686_20375 0.53 +0.6 4,161,834 - OH686_20375 0.53 -0.4 4,161,834 - OH686_20375 0.53 -1.3 4,161,834 - OH686_20375 0.53 -1.0 4,161,837 + OH686_20375 0.53 +2.1 4,161,837 + OH686_20375 0.53 +0.9 4,161,837 + OH686_20375 0.53 +1.2 4,161,942 + OH686_20375 0.60 +1.7 4,161,942 + OH686_20375 0.60 +0.7 4,161,942 + OH686_20375 0.60 +0.9 4,161,942 + OH686_20375 0.60 +0.6 4,161,942 + OH686_20375 0.60 +0.4 4,161,942 + OH686_20375 0.60 +0.9 4,161,943 - OH686_20375 0.60 -0.9 4,161,943 - OH686_20375 0.60 -0.3 4,161,943 - OH686_20375 0.60 +2.5 4,162,071 + OH686_20375 0.69 +1.0 4,162,071 + OH686_20375 0.69 +0.1 4,162,071 + OH686_20375 0.69 +0.1 4,162,071 + OH686_20375 0.69 +0.2 4,162,072 - OH686_20375 0.69 -1.4 4,162,200 + OH686_20375 0.77 -2.0 4,162,200 + OH686_20375 0.77 +1.7 4,162,201 - OH686_20375 0.77 +0.5 4,162,201 - OH686_20375 0.77 +0.5 4,162,377 + OH686_20375 0.89 +0.4 4,162,378 - OH686_20375 0.89 +0.7 4,162,491 + +0.0 4,162,544 + +0.6 4,162,544 + -0.4 4,162,544 + -0.6 4,162,544 + -0.4 4,162,544 + +0.6 4,162,544 + -0.7 4,162,544 + +0.2 4,162,545 - +1.0 4,162,545 - -0.6 4,162,545 - +0.3 4,162,545 - +0.4 4,162,545 - -0.0 4,162,754 + OH686_20380 0.22 -0.4 4,162,755 - OH686_20380 0.23 -1.5 4,162,755 - OH686_20380 0.23 +0.1 4,162,923 + OH686_20380 0.44 +0.0 4,162,924 - OH686_20380 0.44 -0.6 4,162,924 - OH686_20380 0.44 +0.0 4,163,001 + OH686_20380 0.54 -0.4 4,163,001 + OH686_20380 0.54 +0.3 4,163,001 + OH686_20380 0.54 +0.3 4,163,001 + OH686_20380 0.54 -0.5 4,163,001 + OH686_20380 0.54 +1.1 4,163,001 + OH686_20380 0.54 -1.7 4,163,001 + OH686_20380 0.54 -0.1 4,163,001 + OH686_20380 0.54 -0.3 4,163,001 + OH686_20380 0.54 +0.7 4,163,001 + OH686_20380 0.54 +0.4 4,163,001 + OH686_20380 0.54 +0.5 4,163,001 + OH686_20380 0.54 +1.1 4,163,001 + OH686_20380 0.54 +0.7 4,163,001 + OH686_20380 0.54 -0.4 4,163,002 - OH686_20380 0.54 -1.0 4,163,002 - OH686_20380 0.54 -1.4 4,163,002 - OH686_20380 0.54 -0.2 4,163,002 - OH686_20380 0.54 +0.6 4,163,002 - OH686_20380 0.54 -0.3 4,163,002 - OH686_20380 0.54 -0.4 4,163,007 + OH686_20380 0.55 +0.7 4,163,007 + OH686_20380 0.55 -0.3 4,163,008 - OH686_20380 0.55 +0.3 4,163,008 - OH686_20380 0.55 -0.1 4,163,028 + OH686_20380 0.57 +0.4 4,163,028 + OH686_20380 0.57 -0.6 4,163,028 + OH686_20380 0.57 +0.3 4,163,028 + OH686_20380 0.57 +0.0 4,163,028 + OH686_20380 0.57 -0.1 4,163,028 + OH686_20380 0.57 +1.0 4,163,028 + OH686_20380 0.57 -0.4 4,163,028 + OH686_20380 0.57 -0.6 4,163,029 - OH686_20380 0.58 +0.1 4,163,029 - OH686_20380 0.58 +2.1 4,163,029 - OH686_20380 0.58 +0.1 4,163,029 - OH686_20380 0.58 +0.1 4,163,029 - OH686_20380 0.58 -0.2 4,163,029 - OH686_20380 0.58 +1.3 4,163,029 - OH686_20380 0.58 +1.3 4,163,029 - OH686_20380 0.58 -0.3 4,163,029 - OH686_20380 0.58 -0.1 4,163,191 + OH686_20380 0.78 -0.4 4,163,191 + OH686_20380 0.78 +0.3 4,163,192 - OH686_20380 0.78 +2.0 4,163,229 + OH686_20380 0.83 +1.0 4,163,229 + OH686_20380 0.83 +0.3 4,163,229 + OH686_20380 0.83 -0.2 4,163,229 + OH686_20380 0.83 +0.1 4,163,229 + OH686_20380 0.83 -0.5 4,163,230 - OH686_20380 0.83 +0.1 4,163,230 - OH686_20380 0.83 +0.6 4,163,230 - OH686_20380 0.83 -0.6 4,163,268 + OH686_20380 0.88 +0.9 4,163,268 + OH686_20380 0.88 -1.5 4,163,269 - OH686_20380 0.88 -0.3 4,163,301 + -0.4 4,163,340 + -0.5 4,163,340 + +1.0 4,163,340 + +1.0 4,163,340 + +0.3 4,163,341 - +0.5 4,163,385 + +0.4 4,163,385 + -0.2 4,163,385 + -1.1 4,163,385 + -0.1 4,163,385 + -0.9 4,163,386 - -0.8 4,163,386 - +0.3 4,163,454 + OH686_20385 0.22 -0.2 4,163,454 + OH686_20385 0.22 -1.0 4,163,454 + OH686_20385 0.22 -0.0 4,163,454 + OH686_20385 0.22 -0.4 4,163,454 + OH686_20385 0.22 -0.1 4,163,454 + OH686_20385 0.22 +0.1 4,163,455 - OH686_20385 0.23 -0.2 4,163,455 - OH686_20385 0.23 -1.4 4,163,455 - OH686_20385 0.23 -0.5 4,163,455 - OH686_20385 0.23 +0.4 4,163,455 - OH686_20385 0.23 +1.7 4,163,455 - OH686_20385 0.23 -1.0
Or see this region's nucleotide sequence