Strain Fitness in Pseudomonas sp. S08-1 around OH686_18020

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,755,331	-				-0.5
3,755,331	-				+0.2
3,755,331	-				-0.1
3,755,602	+				-0.9
3,755,602	+				+0.1
3,755,602	+				-0.8
3,755,602	+				-0.1
3,755,602	+				+0.3
3,755,602	+				+0.5
3,755,602	+				+0.4
3,755,602	+				-0.1
3,755,602	+				+0.1
3,755,603	-				-0.2
3,755,603	-				-0.2
3,755,603	-				+0.7
3,755,603	-				+0.3
3,755,603	-				+0.7
3,755,603	-				-0.5
3,755,603	-				-0.4
3,755,603	-				+1.0
3,755,608	+				-0.4
3,755,608	+				-0.4
3,755,608	+				+0.3
3,755,608	+				-1.4
3,755,608	+				-0.1
3,755,608	+				+0.3
3,755,608	+				+0.3
3,755,608	+				-0.0
3,755,608	+				-1.9
3,755,608	+				-0.6
3,755,608	+				+0.6
3,755,608	+				-0.1
3,755,608	+				+0.1
3,755,608	+				-0.0
3,755,609	-				+0.0
3,755,609	-				+1.2
3,755,609	-				+1.3
3,755,609	-				-0.2
3,755,609	-				-0.3
3,755,609	-				+0.3
3,755,609	-				-0.7
3,755,609	-				+0.0
3,755,609	-				+0.8
3,755,609	-				-0.3
3,755,609	-				+0.1
3,755,644	+				-0.6
3,755,668	+				-0.9
3,755,668	+				-1.1
3,755,669	-				-0.8
3,755,669	-				-0.1
3,755,735	+				-0.5
3,755,735	+				-0.4
3,755,736	-				+0.5
3,755,736	-				-0.6
3,755,736	-				-1.0
3,755,737	+				-0.3
3,755,737	+				+0.1
3,755,737	+				+0.3
3,755,737	+				-0.1
3,755,737	+				-1.3
3,755,737	+				+0.4
3,755,737	+				-0.2
3,755,737	+				-1.1
3,755,737	+				-1.5
3,755,738	-				-0.3
3,755,738	-				+0.1
3,755,738	-				-0.1
3,755,738	-				+0.7
3,755,807	+				-1.6
3,755,807	+				-0.4
3,755,807	+				-0.8
3,755,808	-				-1.7
3,755,921	+		OH686_18020	0.24	-1.0
3,755,921	+		OH686_18020	0.24	-0.0
3,755,922	-		OH686_18020	0.24	-0.9
3,755,922	-		OH686_18020	0.24	-0.6
3,755,922	-		OH686_18020	0.24	-1.1
3,755,922	-		OH686_18020	0.24	-1.5
3,755,952	-		OH686_18020	0.29	-3.4
3,756,085	+		OH686_18020	0.52	-0.1
3,756,085	+		OH686_18020	0.52	-0.4
3,756,085	+		OH686_18020	0.52	-0.8
3,756,085	+		OH686_18020	0.52	-1.4
3,756,086	-		OH686_18020	0.52	-0.6
3,756,086	-		OH686_18020	0.52	-0.2
3,756,086	-		OH686_18020	0.52	-1.2
3,756,086	-		OH686_18020	0.52	-2.4
3,756,086	-		OH686_18020	0.52	-0.7
3,756,086	-		OH686_18020	0.52	-0.9
3,756,127	+		OH686_18020	0.59	-2.3
3,756,127	+		OH686_18020	0.59	-1.6
3,756,127	+		OH686_18020	0.59	-1.9
3,756,127	+		OH686_18020	0.59	-1.3
3,756,128	-		OH686_18020	0.59	-0.8
3,756,128	-		OH686_18020	0.59	-0.0
3,756,128	-		OH686_18020	0.59	+0.6
3,756,151	+		OH686_18020	0.63	-0.3
3,756,151	+		OH686_18020	0.63	-0.8
3,756,151	+		OH686_18020	0.63	-0.7
3,756,151	+		OH686_18020	0.63	-2.6
3,756,151	+		OH686_18020	0.63	+0.5
3,756,151	+		OH686_18020	0.63	-1.9
3,756,151	+		OH686_18020	0.63	-2.1
3,756,151	+		OH686_18020	0.63	-0.7
3,756,151	+		OH686_18020	0.63	-0.6
3,756,151	+		OH686_18020	0.63	-1.1
3,756,151	+		OH686_18020	0.63	-2.0
3,756,151	+		OH686_18020	0.63	-0.9
3,756,151	+		OH686_18020	0.63	-0.3
3,756,151	+		OH686_18020	0.63	-2.2
3,756,151	+		OH686_18020	0.63	-0.3
3,756,151	+		OH686_18020	0.63	-0.3
3,756,151	+		OH686_18020	0.63	-0.3
3,756,151	+		OH686_18020	0.63	-0.6
3,756,151	+		OH686_18020	0.63	-1.1
3,756,151	+		OH686_18020	0.63	-0.9
3,756,151	+		OH686_18020	0.63	-1.4
3,756,151	+		OH686_18020	0.63	+0.1
3,756,151	+		OH686_18020	0.63	-0.3
3,756,151	+		OH686_18020	0.63	-0.6
3,756,151	+		OH686_18020	0.63	-0.6
3,756,152	-		OH686_18020	0.63	-0.7
3,756,152	-		OH686_18020	0.63	+0.1
3,756,152	-		OH686_18020	0.63	-1.6
3,756,152	-		OH686_18020	0.63	-1.9
3,756,152	-		OH686_18020	0.63	-2.7
3,756,152	-		OH686_18020	0.63	-0.0
3,756,152	-		OH686_18020	0.63	-0.0
3,756,152	-		OH686_18020	0.63	-1.0
3,756,152	-		OH686_18020	0.63	-0.6
3,756,152	-		OH686_18020	0.63	-0.3
3,756,152	-		OH686_18020	0.63	-1.7
3,756,152	-		OH686_18020	0.63	-1.7
3,756,152	-		OH686_18020	0.63	-1.5
3,756,152	-		OH686_18020	0.63	-1.8
3,756,152	-		OH686_18020	0.63	-0.5
3,756,152	-		OH686_18020	0.63	-1.5
3,756,152	-		OH686_18020	0.63	+1.2
3,756,152	-		OH686_18020	0.63	-1.1
3,756,152	-		OH686_18020	0.63	-1.6
3,756,152	-		OH686_18020	0.63	-2.4
3,756,152	-		OH686_18020	0.63	-0.9
3,756,152	-		OH686_18020	0.63	-1.4
3,756,152	-		OH686_18020	0.63	-1.3
3,756,152	-		OH686_18020	0.63	+0.5
3,756,152	-		OH686_18020	0.63	-1.8
3,756,152	-		OH686_18020	0.63	-1.6
3,756,152	-		OH686_18020	0.63	-1.6
3,756,152	-		OH686_18020	0.63	-1.9
3,756,152	-		OH686_18020	0.63	-3.1
3,756,152	-		OH686_18020	0.63	-1.0
3,756,152	-		OH686_18020	0.63	+0.2
3,756,214	+		OH686_18020	0.74	-0.9
3,756,299	+		OH686_18020	0.88	-3.6
3,756,299	+		OH686_18020	0.88	-1.9
3,756,299	+		OH686_18020	0.88	+0.0
3,756,299	+		OH686_18020	0.88	-2.6
3,756,300	-		OH686_18020	0.89	+0.3
3,756,300	-		OH686_18020	0.89	-1.4
3,756,300	-		OH686_18020	0.89	-1.2
3,756,300	-		OH686_18020	0.89	-0.1
3,756,300	-		OH686_18020	0.89	+0.9
3,756,364	+				+0.1
3,756,364	+				-0.5
3,756,364	+				-3.2
3,756,365	-				+0.4
3,756,448	+				+0.8
3,756,448	+				-0.4
3,756,448	+				-0.0
3,756,448	+				+0.5
3,756,448	+				-0.9
3,756,448	+				-0.4
3,756,448	+				-0.6
3,756,448	+				-1.9
3,756,448	+				-0.2
3,756,448	+				+0.1
3,756,448	+				-0.6
3,756,499	+		OH686_18025	0.32	+1.2
3,756,500	-		OH686_18025	0.33	+0.1
3,756,526	+		OH686_18025	0.45	-0.3
3,756,526	+		OH686_18025	0.45	+0.7
3,756,526	+		OH686_18025	0.45	-1.7
3,756,526	+		OH686_18025	0.45	-0.2
3,756,526	+		OH686_18025	0.45	-0.5
3,756,526	+		OH686_18025	0.45	+1.5
3,756,526	+		OH686_18025	0.45	+0.6
3,756,526	+		OH686_18025	0.45	-0.4
3,756,526	+		OH686_18025	0.45	+0.1
3,756,526	+		OH686_18025	0.45	+0.8
3,756,527	-		OH686_18025	0.46	+0.5
3,756,527	-		OH686_18025	0.46	+0.7
3,756,527	-		OH686_18025	0.46	+0.3
3,756,527	-		OH686_18025	0.46	-1.1
3,756,527	-		OH686_18025	0.46	+0.3
3,756,527	-		OH686_18025	0.46	+1.7
3,756,527	-		OH686_18025	0.46	+0.1
3,756,541	+		OH686_18025	0.53	-0.6
3,756,542	-		OH686_18025	0.53	-0.1
3,756,542	-		OH686_18025	0.53	-0.4
3,756,542	-		OH686_18025	0.53	-0.6
3,756,570	+		OH686_18025	0.67	+0.8
3,756,570	+		OH686_18025	0.67	-1.7
3,756,570	+		OH686_18025	0.67	-1.5
3,756,570	+		OH686_18025	0.67	-0.7
3,756,570	+		OH686_18025	0.67	+0.0
3,756,570	+		OH686_18025	0.67	-0.4
3,756,570	+		OH686_18025	0.67	+1.4
3,756,570	+		OH686_18025	0.67	+0.6
3,756,571	-		OH686_18025	0.67	+0.1
3,756,571	-		OH686_18025	0.67	-0.3
3,756,571	-		OH686_18025	0.67	-0.1
3,756,571	-		OH686_18025	0.67	-0.3
3,756,571	-		OH686_18025	0.67	-0.5
3,756,571	-		OH686_18025	0.67	-0.3
3,756,571	-		OH686_18025	0.67	-0.2
3,756,571	-		OH686_18025	0.67	+1.2
3,756,571	-		OH686_18025	0.67	+0.3
3,756,607	+		OH686_18025	0.85	-0.1
3,756,608	-		OH686_18025	0.85	+0.6
3,756,608	-		OH686_18025	0.85	+0.4
3,756,633	+				-0.7
3,756,633	+				+0.3
3,756,633	+				-0.3
3,756,633	+				-0.5
3,756,634	-				-0.1
3,756,634	-				-0.6
3,756,634	-				+0.7
3,756,634	-				+0.0
3,756,634	-				+0.2
3,756,634	-				-0.6
3,756,634	-				+0.3
3,756,690	-				-0.2
3,756,704	+				-0.5
3,756,704	+				+0.5
3,756,705	-				-0.1
3,756,705	-				-1.1
3,756,783	+				+0.2
3,756,801	+				-1.3
3,756,802	-				-0.5
3,756,956	+				-0.3
3,756,956	+				-0.2
3,756,956	+				-0.6
3,756,956	+				+0.1
3,756,956	+				+0.0
3,756,956	+				-1.0
3,756,956	+				+0.5
3,756,956	+				-1.6
3,756,956	+				-0.5
3,756,956	+				-1.5
3,756,956	+				+0.3
3,756,956	+				-0.7
3,756,956	+				-2.0
3,756,956	+				-0.5
3,756,956	+				+0.2
3,756,957	-				-0.0
3,756,957	-				+0.8
3,756,957	-				+0.4
3,756,957	-				+0.1
3,756,957	-				-0.8
3,756,957	-				+0.5
3,756,957	-				-1.5
3,756,957	-				-0.2
3,756,957	-				+0.4
3,756,957	-				-1.2
3,756,957	-				-0.6
3,756,957	-				+0.7
3,756,991	+				-0.8
3,756,991	+				-0.5
3,756,991	+				+0.6
3,756,992	-				-0.4
3,756,992	-				+0.5
3,756,992	-				+0.1
3,757,015	+		OH686_18030	0.12	-0.2
3,757,201	+		OH686_18030	0.77	-0.6
3,757,254	+				+0.2
3,757,255	-				-0.3
3,757,255	-				-0.4
3,757,255	-				+0.5
3,757,255	-				-0.7
3,757,260	+				-0.2
3,757,260	+				-0.4
3,757,260	+				-0.7
3,757,260	+				-0.4
3,757,260	+				+0.8
3,757,260	+				+0.4
3,757,260	+				-0.0
3,757,260	+				-0.5
3,757,260	+				+0.3
3,757,260	+				+0.1
3,757,260	+				+1.0
3,757,260	+				+0.8
3,757,261	-				+0.5
3,757,261	-				-0.2
3,757,261	-				-0.0
3,757,261	-				+0.6
3,757,261	-				+1.4
3,757,261	-				+0.4
3,757,261	-				+0.0
3,757,261	-				+0.8
3,757,261	-				+0.4
3,757,261	-				+1.3
3,757,261	-				-1.3
3,757,261	-				-0.3
3,757,261	-				+1.2