Strain Fitness in Pseudomonas sp. S08-1 around OH686_15885

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,313,238	+		OH686_15880	0.39	-0.2
3,313,238	+		OH686_15880	0.39	+0.2
3,313,238	+		OH686_15880	0.39	-1.0
3,313,239	-		OH686_15880	0.39	+0.1
3,313,239	-		OH686_15880	0.39	+0.7
3,313,335	-		OH686_15880	0.47	-0.6
3,313,991	+				+0.7
3,313,991	+				-0.8
3,313,991	+				+0.3
3,313,991	+				-0.9
3,313,991	+				+0.5
3,313,991	+				+0.4
3,313,991	+				+0.4
3,313,991	+				-1.0
3,313,991	+				+0.6
3,313,992	-				-0.4
3,313,992	-				-0.3
3,313,992	-				-0.3
3,313,992	-				+0.4
3,313,992	-				+0.7
3,314,013	+				+0.1
3,314,014	-				-0.1
3,314,090	+				-0.6
3,314,090	+				-1.3
3,314,090	+				-0.7
3,314,090	+				+0.1
3,314,090	+				+0.1
3,314,090	+				-0.5
3,314,090	+				-0.0
3,314,090	+				+0.2
3,314,091	-				-0.4
3,314,091	-				-0.3
3,314,091	-				+0.2
3,314,091	-				+0.7
3,314,091	-				-0.4
3,314,091	-				-1.0
3,314,091	-				-0.0
3,314,186	+				-0.2
3,314,186	+				+0.2
3,314,186	+				-1.5
3,314,187	-				+0.0
3,314,435	+		OH686_15885	0.19	-0.9
3,314,435	+		OH686_15885	0.19	-0.0
3,314,435	+		OH686_15885	0.19	-1.0
3,314,435	+		OH686_15885	0.19	-1.4
3,314,436	-		OH686_15885	0.19	+0.3
3,314,436	-		OH686_15885	0.19	-0.9
3,314,436	-		OH686_15885	0.19	-0.4
3,314,436	-		OH686_15885	0.19	-0.3
3,314,436	-		OH686_15885	0.19	-0.2
3,314,436	-		OH686_15885	0.19	-0.3
3,314,436	-		OH686_15885	0.19	-0.9
3,314,436	-		OH686_15885	0.19	-0.3
3,314,501	+		OH686_15885	0.23	+1.3
3,314,501	+		OH686_15885	0.23	-1.2
3,314,501	+		OH686_15885	0.23	-0.4
3,314,501	+		OH686_15885	0.23	-1.5
3,314,501	+		OH686_15885	0.23	-0.3
3,314,501	+		OH686_15885	0.23	-1.4
3,314,501	+		OH686_15885	0.23	-1.6
3,314,501	+		OH686_15885	0.23	-1.6
3,314,501	+		OH686_15885	0.23	-1.4
3,314,501	+		OH686_15885	0.23	-1.1
3,314,502	-		OH686_15885	0.23	-0.5
3,314,502	-		OH686_15885	0.23	-0.8
3,314,502	-		OH686_15885	0.23	-0.6
3,314,502	-		OH686_15885	0.23	-0.6
3,314,502	-		OH686_15885	0.23	-0.6
3,314,502	-		OH686_15885	0.23	-0.4
3,314,502	-		OH686_15885	0.23	-0.6
3,314,502	-		OH686_15885	0.23	-1.9
3,314,502	-		OH686_15885	0.23	-1.0
3,314,502	-		OH686_15885	0.23	-0.3
3,314,556	+		OH686_15885	0.25	-1.1
3,314,556	+		OH686_15885	0.25	-1.6
3,314,556	+		OH686_15885	0.25	-0.2
3,314,556	+		OH686_15885	0.25	-2.3
3,314,556	+		OH686_15885	0.25	-0.5
3,314,556	+		OH686_15885	0.25	-0.8
3,314,556	+		OH686_15885	0.25	+0.1
3,314,556	+		OH686_15885	0.25	-0.7
3,314,557	-		OH686_15885	0.25	-1.2
3,314,557	-		OH686_15885	0.25	-0.4
3,314,557	-		OH686_15885	0.25	-1.0
3,314,557	-		OH686_15885	0.25	-0.6
3,314,557	-		OH686_15885	0.25	-0.2
3,314,557	-		OH686_15885	0.25	-0.4
3,314,557	-		OH686_15885	0.25	-0.9
3,314,557	-		OH686_15885	0.25	-0.5
3,314,557	-		OH686_15885	0.25	-0.2
3,314,557	-		OH686_15885	0.25	+1.1
3,314,557	-		OH686_15885	0.25	-1.2
3,314,557	-		OH686_15885	0.25	-1.0
3,314,557	-		OH686_15885	0.25	-0.9
3,314,568	-		OH686_15885	0.26	+0.1
3,314,606	+		OH686_15885	0.28	-0.6
3,314,606	+		OH686_15885	0.28	-0.7
3,314,606	+		OH686_15885	0.28	-1.7
3,314,606	+		OH686_15885	0.28	-0.5
3,314,607	-		OH686_15885	0.28	-1.6
3,314,607	-		OH686_15885	0.28	-1.1
3,314,607	-		OH686_15885	0.28	+0.1
3,314,607	-		OH686_15885	0.28	-0.0
3,314,607	-		OH686_15885	0.28	+0.4
3,314,828	+		OH686_15885	0.40	-1.3
3,314,829	-		OH686_15885	0.40	+1.3
3,314,829	-		OH686_15885	0.40	-0.4
3,314,867	+		OH686_15885	0.42	-0.3
3,314,867	+		OH686_15885	0.42	-0.9
3,314,883	+		OH686_15885	0.43	-2.8
3,314,883	+		OH686_15885	0.43	-1.3
3,314,883	+		OH686_15885	0.43	-1.0
3,314,884	-		OH686_15885	0.43	-1.6
3,314,966	+		OH686_15885	0.47	-1.1
3,314,966	+		OH686_15885	0.47	-0.6
3,314,966	+		OH686_15885	0.47	-1.1
3,314,966	+		OH686_15885	0.47	-3.1
3,314,966	+		OH686_15885	0.47	-1.2
3,314,966	+		OH686_15885	0.47	-1.0
3,314,967	-		OH686_15885	0.47	+0.1
3,314,967	-		OH686_15885	0.47	-1.1
3,314,967	-		OH686_15885	0.47	-0.1
3,314,967	-		OH686_15885	0.47	+0.3
3,314,967	-		OH686_15885	0.47	-0.8
3,314,999	+		OH686_15885	0.49	-0.8
3,314,999	+		OH686_15885	0.49	-1.4
3,315,000	-		OH686_15885	0.49	-0.7
3,315,000	-		OH686_15885	0.49	-0.6
3,315,000	-		OH686_15885	0.49	-0.9
3,315,095	+		OH686_15885	0.54	-1.7
3,315,096	-		OH686_15885	0.54	+0.3
3,315,096	-		OH686_15885	0.54	-0.8
3,315,096	-		OH686_15885	0.54	-0.6
3,315,096	-		OH686_15885	0.54	-1.6
3,315,096	-		OH686_15885	0.54	+0.2
3,315,096	-		OH686_15885	0.54	-2.0
3,315,159	+		OH686_15885	0.57	-1.3
3,315,159	+		OH686_15885	0.57	-2.6
3,315,159	+		OH686_15885	0.57	-1.0
3,315,159	+		OH686_15885	0.57	-1.1
3,315,160	-		OH686_15885	0.57	-0.8
3,315,160	-		OH686_15885	0.57	-1.4
3,315,160	-		OH686_15885	0.57	-0.6
3,315,497	+		OH686_15885	0.75	-1.4
3,315,497	+		OH686_15885	0.75	+1.4
3,315,497	+		OH686_15885	0.75	-1.9
3,315,497	+		OH686_15885	0.75	-0.8
3,315,497	+		OH686_15885	0.75	-1.1
3,315,497	+		OH686_15885	0.75	-1.1
3,315,497	+		OH686_15885	0.75	-1.2
3,315,497	+		OH686_15885	0.75	-2.2
3,315,497	+		OH686_15885	0.75	-2.5
3,315,497	+		OH686_15885	0.75	-1.9
3,315,498	-		OH686_15885	0.75	+0.5
3,315,498	-		OH686_15885	0.75	-0.4
3,315,498	-		OH686_15885	0.75	-1.3
3,315,498	-		OH686_15885	0.75	+0.3
3,315,498	-		OH686_15885	0.75	-2.4
3,315,498	-		OH686_15885	0.75	-0.6
3,315,498	-		OH686_15885	0.75	+0.1
3,315,498	-		OH686_15885	0.75	-0.4
3,315,498	-		OH686_15885	0.75	+0.4
3,315,498	-		OH686_15885	0.75	-2.7
3,315,498	-		OH686_15885	0.75	+0.0
3,315,533	+		OH686_15885	0.77	-1.7
3,315,534	-		OH686_15885	0.77	-0.6
3,315,534	-		OH686_15885	0.77	-2.1
3,315,748	-		OH686_15885	0.89	-0.1
3,315,749	+		OH686_15885	0.89	-1.4
3,315,749	+		OH686_15885	0.89	-0.8
3,315,749	+		OH686_15885	0.89	-1.1
3,315,749	+		OH686_15885	0.89	-1.6
3,315,749	+		OH686_15885	0.89	-2.6
3,315,750	-		OH686_15885	0.89	-1.5
3,315,750	-		OH686_15885	0.89	-0.8
3,315,750	-		OH686_15885	0.89	-0.9
3,315,750	-		OH686_15885	0.89	-1.0
3,315,767	+		OH686_15885	0.90	+0.1
3,315,767	+		OH686_15885	0.90	-0.4
3,315,768	-		OH686_15885	0.90	-1.0
3,315,768	-		OH686_15885	0.90	-0.2
3,315,768	-		OH686_15885	0.90	-0.5
3,315,768	-		OH686_15885	0.90	-0.6
3,315,872	+				-0.0
3,315,872	+				-0.9
3,315,872	+				-0.9
3,315,872	+				-1.3
3,315,872	+				-3.9
3,315,872	+				-2.2
3,315,872	+				-0.9
3,315,872	+				-1.5
3,315,872	+				-0.9
3,315,873	-				-1.3
3,315,873	-				+0.1
3,315,873	-				+1.2
3,315,873	-				-0.3
3,315,873	-				-1.7
3,315,873	-				-1.9
3,315,873	-				+0.1
3,315,873	-				+0.7
3,315,873	-				-0.1
3,315,873	-				+0.2
3,315,873	-				+0.1
3,315,940	+				+0.3
3,315,940	+				-2.1
3,315,940	+				-1.5
3,315,940	+				+0.7
3,315,940	+				-0.0
3,315,940	+				-0.9
3,315,940	+				-0.6
3,315,940	+				-0.4
3,315,940	+				-0.4
3,315,940	+				-1.0
3,315,940	+				-3.1
3,315,940	+				+0.4
3,315,940	+				-1.8
3,315,941	-				+0.9
3,315,941	-				-0.4
3,315,941	-				+0.3
3,315,941	-				-2.1
3,315,941	-				-2.9
3,315,941	-				-0.6
3,315,941	-				-0.5
3,315,941	-				-1.7
3,315,941	-				-0.6
3,315,941	-				+0.0
3,315,941	-				+0.7
3,315,941	-				-0.9
3,316,062	+				-0.0
3,316,062	+				-1.9
3,316,157	+				+0.1
3,316,157	+				-0.4
3,316,157	+				+0.1
3,316,158	-				-0.8
3,316,158	-				-1.8
3,316,158	-				+1.2
3,316,158	-				-0.1
3,316,205	+				+0.2
3,316,205	+				+0.4
3,316,206	-				+0.8
3,316,206	-				-0.2
3,316,235	+				-0.6
3,316,235	+				+0.7
3,316,235	+				+0.7
3,316,235	+				+1.5
3,316,236	-				+0.9
3,316,236	-				+0.8
3,316,236	-				-1.1
3,316,236	-				-0.5
3,316,236	-				+0.5
3,316,237	+				+0.2
3,316,237	+				+1.5
3,316,237	+				-0.4
3,316,237	+				+0.7
3,316,237	+				+0.2
3,316,237	+				+1.3
3,316,237	+				-1.8
3,316,238	-				-0.0
3,316,238	-				-0.9
3,316,238	-				+0.5
3,316,332	-				-0.8
3,316,356	+				+0.1
3,316,356	+				-0.6
3,316,356	+				-0.4
3,316,356	+				-0.7
3,316,356	+				-0.1
3,316,356	+				-0.1
3,316,356	+				-0.0
3,316,357	-				-0.4
3,316,357	-				-0.4
3,316,357	-				-0.6
3,316,357	-				+0.6
3,316,371	+				-0.9
3,316,371	+				-0.7
3,316,398	+				-0.3
3,316,472	+				-0.9
3,316,472	+				-0.3
3,316,523	+				+0.7
3,316,523	+				-0.1
3,316,523	+				+0.5
3,316,523	+				+0.1
3,316,524	-				-0.3
3,316,524	-				-0.1
3,316,524	-				-0.1
3,316,524	-				-0.7
3,316,524	-				-0.3
3,316,524	-				-0.7
3,316,524	-				-0.2
3,316,665	-		OH686_15890	0.18	-1.1
3,316,745	+		OH686_15890	0.23	+0.1
3,316,745	+		OH686_15890	0.23	-0.8
3,316,745	+		OH686_15890	0.23	-0.4
3,316,745	+		OH686_15890	0.23	-0.4
3,316,746	-		OH686_15890	0.24	-0.7
3,316,746	-		OH686_15890	0.24	-1.5
3,316,746	-		OH686_15890	0.24	-0.4
3,316,746	-		OH686_15890	0.24	-0.2
3,316,802	+		OH686_15890	0.28	-0.6
3,316,802	+		OH686_15890	0.28	-0.4
3,316,802	+		OH686_15890	0.28	-1.3
3,316,802	+		OH686_15890	0.28	-0.4
3,316,802	+		OH686_15890	0.28	-0.4
3,316,803	-		OH686_15890	0.28	-0.9
3,316,803	-		OH686_15890	0.28	-2.1
3,316,803	-		OH686_15890	0.28	-2.9
3,316,803	-		OH686_15890	0.28	+0.3
3,316,947	-		OH686_15890	0.38	-0.3