Strain Fitness in Pseudomonas sp. S08-1 around OH686_14425

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,013,757	+		OH686_14420	0.54	-0.2
3,013,757	+		OH686_14420	0.54	-0.6
3,013,758	-		OH686_14420	0.54	+0.4
3,013,758	-		OH686_14420	0.54	-0.8
3,013,758	-		OH686_14420	0.54	-1.7
3,013,758	-		OH686_14420	0.54	-0.6
3,013,758	-		OH686_14420	0.54	+0.4
3,013,758	-		OH686_14420	0.54	-0.8
3,013,758	-		OH686_14420	0.54	-0.8
3,013,758	-		OH686_14420	0.54	-1.6
3,013,886	+		OH686_14420	0.62	-0.2
3,013,886	+		OH686_14420	0.62	+1.3
3,013,887	-		OH686_14420	0.62	-0.6
3,013,887	-		OH686_14420	0.62	-2.1
3,013,890	+		OH686_14420	0.62	-0.2
3,013,891	-		OH686_14420	0.62	-0.8
3,013,891	-		OH686_14420	0.62	-0.6
3,013,891	-		OH686_14420	0.62	-0.6
3,013,891	-		OH686_14420	0.62	+0.4
3,013,891	-		OH686_14420	0.62	-0.6
3,013,993	+		OH686_14420	0.67	-1.6
3,013,993	+		OH686_14420	0.67	-0.2
3,013,994	-		OH686_14420	0.67	+1.4
3,014,102	+		OH686_14420	0.73	-0.2
3,014,103	-		OH686_14420	0.74	-0.2
3,014,151	-		OH686_14420	0.76	+1.3
3,014,184	-		OH686_14420	0.78	-2.2
3,014,230	-		OH686_14420	0.81	-0.2
3,014,230	-		OH686_14420	0.81	-0.2
3,014,302	+		OH686_14420	0.85	-0.2
3,014,302	+		OH686_14420	0.85	+1.3
3,014,302	+		OH686_14420	0.85	-0.8
3,014,302	+		OH686_14420	0.85	-0.2
3,014,302	+		OH686_14420	0.85	-0.6
3,014,302	+		OH686_14420	0.85	-0.2
3,014,302	+		OH686_14420	0.85	-0.8
3,014,302	+		OH686_14420	0.85	-0.2
3,014,302	+		OH686_14420	0.85	-0.2
3,014,303	-		OH686_14420	0.85	-1.4
3,014,303	-		OH686_14420	0.85	-0.2
3,014,303	-		OH686_14420	0.85	+0.8
3,014,303	-		OH686_14420	0.85	+0.8
3,014,303	-		OH686_14420	0.85	-0.2
3,014,303	-		OH686_14420	0.85	+0.2
3,014,303	-		OH686_14420	0.85	-0.6
3,014,303	-		OH686_14420	0.85	+0.2
3,014,303	-		OH686_14420	0.85	-0.2
3,014,303	-		OH686_14420	0.85	-1.2
3,014,303	-		OH686_14420	0.85	-0.1
3,014,306	+		OH686_14420	0.85	-0.2
3,014,306	+		OH686_14420	0.85	-0.2
3,014,306	+		OH686_14420	0.85	+0.8
3,014,307	-		OH686_14420	0.85	+1.3
3,014,307	-		OH686_14420	0.85	-1.4
3,014,323	-		OH686_14420	0.86	-0.2
3,014,351	+		OH686_14420	0.87	-0.2
3,014,351	+		OH686_14420	0.87	+1.4
3,014,351	+		OH686_14420	0.87	-0.9
3,014,352	-		OH686_14420	0.87	-0.9
3,014,518	+				-0.2
3,014,518	+				-0.7
3,014,518	+				-0.6
3,014,519	-				-0.3
3,014,519	-				-0.8
3,014,592	+				+0.2
3,014,592	+				-0.2
3,014,592	+				-0.6
3,014,593	-				-0.1
3,014,597	-				-0.1
3,014,597	-				-0.1
3,014,597	-				+0.3
3,014,641	+				-0.8
3,014,641	+				+0.7
3,014,642	-				-0.2
3,014,802	-		OH686_14425	0.12	-0.9
3,014,831	+		OH686_14425	0.15	-0.0
3,014,831	+		OH686_14425	0.15	-1.2
3,015,023	+		OH686_14425	0.30	-1.0
3,015,023	+		OH686_14425	0.30	+0.0
3,015,023	+		OH686_14425	0.30	-0.4
3,015,023	+		OH686_14425	0.30	-2.1
3,015,023	+		OH686_14425	0.30	-1.9
3,015,023	+		OH686_14425	0.30	-1.2
3,015,023	+		OH686_14425	0.30	-1.4
3,015,024	-		OH686_14425	0.30	-0.4
3,015,024	-		OH686_14425	0.30	-1.6
3,015,024	-		OH686_14425	0.30	-1.7
3,015,024	-		OH686_14425	0.30	-2.0
3,015,024	-		OH686_14425	0.30	-2.3
3,015,024	-		OH686_14425	0.30	-0.2
3,015,024	-		OH686_14425	0.30	-1.7
3,015,032	+		OH686_14425	0.31	-0.2
3,015,033	-		OH686_14425	0.31	-2.4
3,015,033	-		OH686_14425	0.31	-3.3
3,015,075	+		OH686_14425	0.34	-0.5
3,015,075	+		OH686_14425	0.34	-0.8
3,015,075	+		OH686_14425	0.34	-1.2
3,015,076	-		OH686_14425	0.34	-1.3
3,015,076	-		OH686_14425	0.34	-2.1
3,015,076	-		OH686_14425	0.34	-1.6
3,015,076	-		OH686_14425	0.34	-0.6
3,015,095	+		OH686_14425	0.36	+0.6
3,015,096	-		OH686_14425	0.36	-0.1
3,015,111	+		OH686_14425	0.37	-0.6
3,015,111	+		OH686_14425	0.37	+0.3
3,015,111	+		OH686_14425	0.37	-1.0
3,015,111	+		OH686_14425	0.37	-0.9
3,015,111	+		OH686_14425	0.37	-0.6
3,015,111	+		OH686_14425	0.37	+0.8
3,015,111	+		OH686_14425	0.37	-1.8
3,015,111	+		OH686_14425	0.37	-0.1
3,015,111	+		OH686_14425	0.37	-2.4
3,015,112	-		OH686_14425	0.37	-2.8
3,015,112	-		OH686_14425	0.37	-2.4
3,015,112	-		OH686_14425	0.37	-3.5
3,015,113	+		OH686_14425	0.37	+0.5
3,015,113	+		OH686_14425	0.37	-2.2
3,015,113	+		OH686_14425	0.37	-0.5
3,015,114	-		OH686_14425	0.37	-0.7
3,015,114	-		OH686_14425	0.37	+0.8
3,015,139	+		OH686_14425	0.39	-1.0
3,015,139	+		OH686_14425	0.39	-0.6
3,015,139	+		OH686_14425	0.39	-0.9
3,015,139	+		OH686_14425	0.39	-0.2
3,015,140	-		OH686_14425	0.40	-0.2
3,015,140	-		OH686_14425	0.40	+0.2
3,015,140	-		OH686_14425	0.40	-1.1
3,015,219	+		OH686_14425	0.46	-0.8
3,015,220	-		OH686_14425	0.46	-1.4
3,015,333	+		OH686_14425	0.55	+0.5
3,015,333	+		OH686_14425	0.55	-0.6
3,015,334	-		OH686_14425	0.55	-3.0
3,015,334	-		OH686_14425	0.55	-0.7
3,015,405	+		OH686_14425	0.61	-3.3
3,015,405	+		OH686_14425	0.61	-1.0
3,015,405	+		OH686_14425	0.61	+1.5
3,015,405	+		OH686_14425	0.61	-1.0
3,015,405	+		OH686_14425	0.61	-1.2
3,015,405	+		OH686_14425	0.61	+0.3
3,015,405	+		OH686_14425	0.61	+0.4
3,015,405	+		OH686_14425	0.61	-0.6
3,015,406	-		OH686_14425	0.61	-0.1
3,015,406	-		OH686_14425	0.61	-1.2
3,015,406	-		OH686_14425	0.61	-0.2
3,015,406	-		OH686_14425	0.61	-2.3
3,015,466	+		OH686_14425	0.66	-0.2
3,015,467	-		OH686_14425	0.66	-1.0
3,015,467	-		OH686_14425	0.66	-1.1
3,015,467	-		OH686_14425	0.66	-0.8
3,015,467	-		OH686_14425	0.66	-1.6
3,015,467	-		OH686_14425	0.66	-1.7
3,015,467	-		OH686_14425	0.66	+0.0
3,015,467	-		OH686_14425	0.66	-2.4
3,015,467	-		OH686_14425	0.66	+1.0
3,015,467	-		OH686_14425	0.66	-0.9
3,015,525	+		OH686_14425	0.71	-0.1
3,015,525	+		OH686_14425	0.71	+0.8
3,015,525	+		OH686_14425	0.71	-1.1
3,015,525	+		OH686_14425	0.71	-1.7
3,015,525	+		OH686_14425	0.71	-0.6
3,015,525	+		OH686_14425	0.71	-2.5
3,015,525	+		OH686_14425	0.71	-0.2
3,015,525	+		OH686_14425	0.71	-0.2
3,015,525	+		OH686_14425	0.71	-0.4
3,015,525	+		OH686_14425	0.71	-1.0
3,015,525	+		OH686_14425	0.71	-0.5
3,015,526	-		OH686_14425	0.71	-1.2
3,015,526	-		OH686_14425	0.71	-1.4
3,015,526	-		OH686_14425	0.71	-0.8
3,015,526	-		OH686_14425	0.71	-1.6
3,015,526	-		OH686_14425	0.71	-0.2
3,015,526	-		OH686_14425	0.71	-1.0
3,015,526	-		OH686_14425	0.71	-2.4
3,015,526	-		OH686_14425	0.71	-0.8
3,015,526	-		OH686_14425	0.71	-1.7
3,015,526	-		OH686_14425	0.71	-0.1
3,015,526	-		OH686_14425	0.71	-0.6
3,015,526	-		OH686_14425	0.71	-0.7
3,015,527	+		OH686_14425	0.71	-0.8
3,015,566	+		OH686_14425	0.74	-0.0
3,015,566	+		OH686_14425	0.74	-0.8
3,015,566	+		OH686_14425	0.74	-0.9
3,015,567	-		OH686_14425	0.74	-1.1
3,015,567	-		OH686_14425	0.74	-0.9
3,015,567	-		OH686_14425	0.74	-2.6
3,015,567	-		OH686_14425	0.74	-1.8
3,015,567	-		OH686_14425	0.74	-0.4
3,015,567	-		OH686_14425	0.74	-1.8
3,015,567	-		OH686_14425	0.74	-2.6
3,015,567	-		OH686_14425	0.74	-1.4
3,015,582	+		OH686_14425	0.75	-1.3
3,015,582	+		OH686_14425	0.75	+0.6
3,015,582	+		OH686_14425	0.75	-0.1
3,015,582	+		OH686_14425	0.75	+0.6
3,015,582	+		OH686_14425	0.75	-1.8
3,015,582	+		OH686_14425	0.75	+0.6
3,015,583	-		OH686_14425	0.76	-1.3
3,015,612	+		OH686_14425	0.78	-2.5
3,015,612	+		OH686_14425	0.78	-1.2
3,015,612	+		OH686_14425	0.78	-0.6
3,015,612	+		OH686_14425	0.78	-0.0
3,015,612	+		OH686_14425	0.78	-0.5
3,015,612	+		OH686_14425	0.78	-1.1
3,015,612	+		OH686_14425	0.78	-0.5
3,015,612	+		OH686_14425	0.78	-0.8
3,015,613	-		OH686_14425	0.78	-1.4
3,015,613	-		OH686_14425	0.78	-1.5
3,015,613	-		OH686_14425	0.78	-1.9
3,015,613	-		OH686_14425	0.78	-0.8
3,015,613	-		OH686_14425	0.78	-1.9
3,015,613	-		OH686_14425	0.78	-2.4
3,015,613	-		OH686_14425	0.78	-1.3
3,015,613	-		OH686_14425	0.78	-0.3
3,015,665	+		OH686_14425	0.82	-1.3
3,015,665	+		OH686_14425	0.82	-0.5
3,015,665	+		OH686_14425	0.82	-0.6
3,015,665	+		OH686_14425	0.82	-0.6
3,015,666	-		OH686_14425	0.82	-1.1
3,015,666	-		OH686_14425	0.82	-1.1
3,015,666	-		OH686_14425	0.82	-2.5
3,015,776	+				-0.2
3,015,776	+				-0.1
3,015,776	+				-0.7
3,015,776	+				-1.6
3,015,776	+				-0.3
3,015,776	+				+0.2
3,015,776	+				-0.6
3,015,776	+				+0.3
3,015,777	-				+0.2
3,015,777	-				-0.8
3,015,777	-				-1.1
3,015,777	-				-2.7
3,015,777	-				-3.6
3,015,777	-				-0.1
3,015,777	-				-1.8
3,015,777	-				-0.6
3,015,777	-				-2.8
3,015,777	-				-0.4
3,015,777	-				-1.4
3,015,777	-				-3.1
3,015,835	+				+0.0
3,015,835	+				-1.1
3,015,835	+				-1.1
3,015,836	-				-0.8
3,015,836	-				-0.5
3,015,843	+				-0.9
3,015,844	-				-1.2
3,015,882	+				-0.5
3,015,882	+				-1.5
3,015,882	+				-0.5
3,015,882	+				-0.4
3,015,882	+				+1.6
3,015,882	+				-0.0
3,015,883	-				+0.3
3,015,883	-				-0.2
3,015,883	-				+0.9
3,015,883	-				-0.8
3,015,924	+				-0.4
3,015,924	+				-0.2
3,015,925	-				-0.1
3,015,925	-				-2.1
3,016,026	-				-0.2
3,016,114	-				-0.0
3,016,208	+		OH686_14430	0.12	+0.0
3,016,209	-		OH686_14430	0.13	-2.0
3,016,221	+		OH686_14430	0.13	+0.1
3,016,221	+		OH686_14430	0.13	+0.5
3,016,221	+		OH686_14430	0.13	+0.2
3,016,221	+		OH686_14430	0.13	-0.0
3,016,221	+		OH686_14430	0.13	-0.4
3,016,221	+		OH686_14430	0.13	+1.0
3,016,221	+		OH686_14430	0.13	+0.3
3,016,222	-		OH686_14430	0.13	-0.6
3,016,222	-		OH686_14430	0.13	-0.9
3,016,222	-		OH686_14430	0.13	-1.7
3,016,222	-		OH686_14430	0.13	-0.7
3,016,222	-		OH686_14430	0.13	+0.2
3,016,222	-		OH686_14430	0.13	-2.0
3,016,222	-		OH686_14430	0.13	-1.8
3,016,240	+		OH686_14430	0.14	+0.7
3,016,241	-		OH686_14430	0.14	+0.3
3,016,241	-		OH686_14430	0.14	-0.7
3,016,260	+		OH686_14430	0.15	+0.3
3,016,260	+		OH686_14430	0.15	+0.2
3,016,260	+		OH686_14430	0.15	+0.0
3,016,260	+		OH686_14430	0.15	-0.1
3,016,260	+		OH686_14430	0.15	+0.3
3,016,260	+		OH686_14430	0.15	-0.6
3,016,261	-		OH686_14430	0.15	-1.2
3,016,261	-		OH686_14430	0.15	-1.7
3,016,261	-		OH686_14430	0.15	+0.2
3,016,269	+		OH686_14430	0.15	+0.2
3,016,269	+		OH686_14430	0.15	-0.4
3,016,269	+		OH686_14430	0.15	+1.4
3,016,270	-		OH686_14430	0.15	-0.7
3,016,287	+		OH686_14430	0.16	-0.2
3,016,287	+		OH686_14430	0.16	-0.1
3,016,287	+		OH686_14430	0.16	-0.2
3,016,287	+		OH686_14430	0.16	+0.1
3,016,287	+		OH686_14430	0.16	-0.3
3,016,287	+		OH686_14430	0.16	+0.4
3,016,287	+		OH686_14430	0.16	+0.6
3,016,287	+		OH686_14430	0.16	-0.9
3,016,287	+		OH686_14430	0.16	+0.3
3,016,288	-		OH686_14430	0.16	-0.0
3,016,288	-		OH686_14430	0.16	-0.1
3,016,288	-		OH686_14430	0.16	+0.9
3,016,288	-		OH686_14430	0.16	-1.2
3,016,288	-		OH686_14430	0.16	-0.1
3,016,288	-		OH686_14430	0.16	-3.5
3,016,288	-		OH686_14430	0.16	+0.4
3,016,288	-		OH686_14430	0.16	-0.6
3,016,288	-		OH686_14430	0.16	-1.3
3,016,288	-		OH686_14430	0.16	-0.6
3,016,288	-		OH686_14430	0.16	-0.7
3,016,288	-		OH686_14430	0.16	-1.7
3,016,318	+		OH686_14430	0.17	-0.2
3,016,356	+		OH686_14430	0.18	+0.2
3,016,356	+		OH686_14430	0.18	+0.1
3,016,356	+		OH686_14430	0.18	-0.7
3,016,357	-		OH686_14430	0.18	-0.6
3,016,357	-		OH686_14430	0.18	-1.3
3,016,357	-		OH686_14430	0.18	-1.2
3,016,400	+		OH686_14430	0.20	-1.1
3,016,484	+		OH686_14430	0.23	-0.3
3,016,484	+		OH686_14430	0.23	-2.5
3,016,484	+		OH686_14430	0.23	-0.4
3,016,484	+		OH686_14430	0.23	-1.8
3,016,484	+		OH686_14430	0.23	+0.6
3,016,484	+		OH686_14430	0.23	+0.4
3,016,484	+		OH686_14430	0.23	-0.5
3,016,484	+		OH686_14430	0.23	+0.7
3,016,484	+		OH686_14430	0.23	+0.1
3,016,484	+		OH686_14430	0.23	+0.0
3,016,484	+		OH686_14430	0.23	+0.3
3,016,484	+		OH686_14430	0.23	+0.5
3,016,484	+		OH686_14430	0.23	+0.5
3,016,484	+		OH686_14430	0.23	-0.1
3,016,484	+		OH686_14430	0.23	-0.2
3,016,485	-		OH686_14430	0.23	+1.3
3,016,485	-		OH686_14430	0.23	+0.3
3,016,485	-		OH686_14430	0.23	-1.2
3,016,485	-		OH686_14430	0.23	+0.3
3,016,485	-		OH686_14430	0.23	-0.4
3,016,485	-		OH686_14430	0.23	+0.6
3,016,485	-		OH686_14430	0.23	-0.6
3,016,485	-		OH686_14430	0.23	-0.7
3,016,485	-		OH686_14430	0.23	-1.2
3,016,494	+		OH686_14430	0.24	+0.1
3,016,497	+		OH686_14430	0.24	-0.3
3,016,497	+		OH686_14430	0.24	-1.0
3,016,497	+		OH686_14430	0.24	+0.0
3,016,497	+		OH686_14430	0.24	+0.2
3,016,497	+		OH686_14430	0.24	-0.7
3,016,497	+		OH686_14430	0.24	-0.1
3,016,497	+		OH686_14430	0.24	+0.2
3,016,497	+		OH686_14430	0.24	+0.4
3,016,497	+		OH686_14430	0.24	+0.2
3,016,497	+		OH686_14430	0.24	-0.4
3,016,497	+		OH686_14430	0.24	+0.0
3,016,497	+		OH686_14430	0.24	+0.6
3,016,497	+		OH686_14430	0.24	-0.6
3,016,497	+		OH686_14430	0.24	-0.1
3,016,497	+		OH686_14430	0.24	+1.3
3,016,497	+		OH686_14430	0.24	-0.0
3,016,497	+		OH686_14430	0.24	-0.7
3,016,497	+		OH686_14430	0.24	-0.5
3,016,497	+		OH686_14430	0.24	+0.5
3,016,497	+		OH686_14430	0.24	+0.1
3,016,497	+		OH686_14430	0.24	-0.1
3,016,497	+		OH686_14430	0.24	+0.4
3,016,497	+		OH686_14430	0.24	+0.3
3,016,497	+		OH686_14430	0.24	+1.3
3,016,497	+		OH686_14430	0.24	+1.1
3,016,497	+		OH686_14430	0.24	-0.2
3,016,498	-		OH686_14430	0.24	-0.7
3,016,498	-		OH686_14430	0.24	-2.2
3,016,498	-		OH686_14430	0.24	+0.2
3,016,498	-		OH686_14430	0.24	-0.6
3,016,498	-		OH686_14430	0.24	+0.4
3,016,498	-		OH686_14430	0.24	-0.5
3,016,498	-		OH686_14430	0.24	-2.2
3,016,498	-		OH686_14430	0.24	-0.5
3,016,498	-		OH686_14430	0.24	-0.7
3,016,498	-		OH686_14430	0.24	-0.2
3,016,498	-		OH686_14430	0.24	-1.2
3,016,498	-		OH686_14430	0.24	-0.0
3,016,498	-		OH686_14430	0.24	+0.8
3,016,498	-		OH686_14430	0.24	-0.1
3,016,498	-		OH686_14430	0.24	-2.1
3,016,498	-		OH686_14430	0.24	-0.4
3,016,498	-		OH686_14430	0.24	-1.0
3,016,498	-		OH686_14430	0.24	-0.5
3,016,498	-		OH686_14430	0.24	+0.8
3,016,498	-		OH686_14430	0.24	-1.1
3,016,498	-		OH686_14430	0.24	+0.1
3,016,498	-		OH686_14430	0.24	-1.2
3,016,498	-		OH686_14430	0.24	-1.2
3,016,498	-		OH686_14430	0.24	-1.0
3,016,498	-		OH686_14430	0.24	+0.0
3,016,688	+		OH686_14430	0.31	+0.3
3,016,688	+		OH686_14430	0.31	+0.5
3,016,688	+		OH686_14430	0.31	+0.5
3,016,689	-		OH686_14430	0.31	-0.2
3,016,791	+		OH686_14430	0.35	+0.3
3,016,791	+		OH686_14430	0.35	-0.3
3,016,792	-		OH686_14430	0.35	-2.5
3,016,800	+		OH686_14430	0.36	-0.1
3,016,800	+		OH686_14430	0.36	+0.3
3,016,800	+		OH686_14430	0.36	+0.0
3,016,800	+		OH686_14430	0.36	+0.0
3,016,800	+		OH686_14430	0.36	-0.1
3,016,800	+		OH686_14430	0.36	+1.0
3,016,800	+		OH686_14430	0.36	-0.1
3,016,801	-		OH686_14430	0.36	-0.5
3,016,801	-		OH686_14430	0.36	-0.8
3,016,801	-		OH686_14430	0.36	+0.5
3,016,830	+		OH686_14430	0.37	+0.3
3,016,830	+		OH686_14430	0.37	-0.2
3,016,831	-		OH686_14430	0.37	+0.0
3,016,831	-		OH686_14430	0.37	-0.7
3,016,831	-		OH686_14430	0.37	-0.2
3,016,831	-		OH686_14430	0.37	-0.8