Strain Fitness in Pseudomonas sp. S08-1 around OH686_14385

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,002,046	+		OH686_14380	0.40	-0.3
3,002,114	-		OH686_14380	0.47	-0.6
3,002,153	-		OH686_14380	0.50	-0.6
3,002,274	+		OH686_14380	0.62	-0.3
3,002,793	+				-1.1
3,002,793	+				+0.9
3,002,793	+				-0.3
3,002,793	+				-0.5
3,002,803	-				-0.0
3,002,813	+				+0.5
3,002,813	+				+0.3
3,002,813	+				+0.3
3,002,813	+				-0.8
3,002,813	+				-0.8
3,002,814	-				-1.9
3,002,814	-				-0.2
3,002,814	-				-1.3
3,002,814	-				-1.5
3,002,814	-				-0.2
3,002,835	-				-1.0
3,002,837	-				-0.5
3,002,837	-				-1.0
3,002,837	-				+0.3
3,002,843	+				-1.1
3,002,844	-				-0.9
3,002,844	-				-1.2
3,002,844	-				-1.4
3,002,856	+				-1.1
3,002,856	+				+0.6
3,002,856	+				-1.1
3,002,857	-				-1.7
3,002,857	-				-2.1
3,002,857	-				-1.2
3,002,866	+				+0.8
3,002,866	+				-0.8
3,002,866	+				-1.1
3,002,866	+				-1.2
3,002,866	+				-0.4
3,002,866	+				+0.8
3,002,866	+				-0.6
3,002,867	-				+0.3
3,002,867	-				-0.3
3,002,867	-				+0.8
3,002,867	-				-0.4
3,002,890	+				+1.8
3,002,890	+				-0.0
3,002,919	-				-2.3
3,002,919	-				-2.8
3,002,919	-				-1.2
3,003,014	+				-1.1
3,003,014	+				-1.4
3,003,015	-				-0.6
3,003,015	-				-1.3
3,003,015	-				-1.0
3,003,015	-				-1.5
3,003,015	-				-2.7
3,003,015	-				-2.1
3,003,019	-				-2.7
3,003,190	+		OH686_14385	0.14	-1.8
3,003,190	+		OH686_14385	0.14	-3.9
3,003,190	+		OH686_14385	0.14	-3.7
3,003,190	+		OH686_14385	0.14	-1.7
3,003,190	+		OH686_14385	0.14	-2.1
3,003,190	+		OH686_14385	0.14	-1.1
3,003,191	-		OH686_14385	0.14	-1.4
3,003,191	-		OH686_14385	0.14	-4.8
3,003,191	-		OH686_14385	0.14	-3.5
3,003,191	-		OH686_14385	0.14	-3.1
3,003,191	-		OH686_14385	0.14	-2.2
3,003,191	-		OH686_14385	0.14	-1.1
3,003,191	-		OH686_14385	0.14	-3.8
3,003,266	+		OH686_14385	0.21	-3.3
3,003,288	+		OH686_14385	0.23	-1.8
3,003,288	+		OH686_14385	0.23	-2.6
3,003,288	+		OH686_14385	0.23	-2.5
3,003,288	+		OH686_14385	0.23	-1.7
3,003,288	+		OH686_14385	0.23	-3.0
3,003,288	+		OH686_14385	0.23	-3.7
3,003,288	+		OH686_14385	0.23	-1.7
3,003,288	+		OH686_14385	0.23	-2.9
3,003,288	+		OH686_14385	0.23	-3.2
3,003,289	-		OH686_14385	0.23	-3.3
3,003,289	-		OH686_14385	0.23	-0.6
3,003,289	-		OH686_14385	0.23	-1.0
3,003,289	-		OH686_14385	0.23	-3.9
3,003,289	-		OH686_14385	0.23	-2.8
3,003,289	-		OH686_14385	0.23	-1.2
3,003,289	-		OH686_14385	0.23	-1.4
3,003,289	-		OH686_14385	0.23	-3.0
3,003,290	+		OH686_14385	0.23	-0.4
3,003,290	+		OH686_14385	0.23	-3.0
3,003,290	+		OH686_14385	0.23	-2.8
3,003,290	+		OH686_14385	0.23	-3.1
3,003,291	-		OH686_14385	0.23	-0.4
3,003,291	-		OH686_14385	0.23	-3.6
3,003,291	-		OH686_14385	0.23	-1.5
3,003,354	+		OH686_14385	0.29	-2.1
3,003,354	+		OH686_14385	0.29	-2.2
3,003,354	+		OH686_14385	0.29	-4.2
3,003,354	+		OH686_14385	0.29	-3.1
3,003,354	+		OH686_14385	0.29	-2.6
3,003,355	-		OH686_14385	0.29	-3.9
3,003,355	-		OH686_14385	0.29	-3.2
3,003,357	+		OH686_14385	0.29	-2.1
3,003,358	-		OH686_14385	0.29	-2.5
3,003,358	-		OH686_14385	0.29	-2.6
3,003,411	+		OH686_14385	0.34	-4.2
3,003,411	+		OH686_14385	0.34	-1.9
3,003,411	+		OH686_14385	0.34	-1.0
3,003,411	+		OH686_14385	0.34	-2.2
3,003,411	+		OH686_14385	0.34	-3.0
3,003,411	+		OH686_14385	0.34	-2.8
3,003,411	+		OH686_14385	0.34	-2.3
3,003,411	+		OH686_14385	0.34	-2.3
3,003,411	+		OH686_14385	0.34	-2.1
3,003,411	+		OH686_14385	0.34	-3.3
3,003,411	+		OH686_14385	0.34	-2.8
3,003,411	+		OH686_14385	0.34	-1.5
3,003,411	+		OH686_14385	0.34	-4.4
3,003,411	+		OH686_14385	0.34	-4.7
3,003,411	+		OH686_14385	0.34	-1.6
3,003,411	+		OH686_14385	0.34	-2.8
3,003,412	-		OH686_14385	0.34	-3.9
3,003,412	-		OH686_14385	0.34	-4.8
3,003,412	-		OH686_14385	0.34	-5.1
3,003,412	-		OH686_14385	0.34	-3.3
3,003,412	-		OH686_14385	0.34	-1.1
3,003,412	-		OH686_14385	0.34	-2.9
3,003,412	-		OH686_14385	0.34	-2.1
3,003,412	-		OH686_14385	0.34	-3.7
3,003,412	-		OH686_14385	0.34	-0.6
3,003,412	-		OH686_14385	0.34	-0.9
3,003,412	-		OH686_14385	0.34	-3.0
3,003,412	-		OH686_14385	0.34	-2.0
3,003,412	-		OH686_14385	0.34	-3.3
3,003,412	-		OH686_14385	0.34	-1.1
3,003,506	+		OH686_14385	0.42	-3.1
3,003,506	+		OH686_14385	0.42	-4.2
3,003,548	+		OH686_14385	0.46	-2.2
3,003,548	+		OH686_14385	0.46	-3.5
3,003,548	+		OH686_14385	0.46	-2.3
3,003,548	+		OH686_14385	0.46	-3.2
3,003,549	-		OH686_14385	0.46	-3.2
3,003,640	-		OH686_14385	0.54	-3.2
3,003,640	-		OH686_14385	0.54	-1.2
3,003,762	+		OH686_14385	0.65	-2.2
3,003,852	+		OH686_14385	0.72	-4.0
3,003,852	+		OH686_14385	0.72	-2.1
3,003,852	+		OH686_14385	0.72	-3.0
3,003,852	+		OH686_14385	0.72	-2.4
3,003,852	+		OH686_14385	0.72	-0.2
3,003,867	+		OH686_14385	0.74	-3.2
3,003,867	+		OH686_14385	0.74	-3.0
3,003,867	+		OH686_14385	0.74	-2.2
3,003,867	+		OH686_14385	0.74	-3.0
3,003,868	-		OH686_14385	0.74	-0.5
3,003,868	-		OH686_14385	0.74	-2.6
3,003,885	+		OH686_14385	0.75	-2.5
3,003,885	+		OH686_14385	0.75	-3.7
3,003,885	+		OH686_14385	0.75	-3.1
3,003,886	-		OH686_14385	0.75	-3.2
3,004,021	+		OH686_14385	0.87	-3.3
3,004,021	+		OH686_14385	0.87	-2.4
3,004,021	+		OH686_14385	0.87	-2.7
3,004,021	+		OH686_14385	0.87	-2.9
3,004,021	+		OH686_14385	0.87	-3.2
3,004,021	+		OH686_14385	0.87	-0.2
3,004,021	+		OH686_14385	0.87	-0.2
3,004,021	+		OH686_14385	0.87	-0.5
3,004,021	+		OH686_14385	0.87	-2.6
3,004,021	+		OH686_14385	0.87	-2.4
3,004,021	+		OH686_14385	0.87	-1.1
3,004,022	-		OH686_14385	0.87	-3.1
3,004,022	-		OH686_14385	0.87	-3.0
3,004,022	-		OH686_14385	0.87	+0.0
3,004,022	-		OH686_14385	0.87	-3.6
3,004,022	-		OH686_14385	0.87	-2.0
3,004,022	-		OH686_14385	0.87	-3.4
3,004,022	-		OH686_14385	0.87	-2.6
3,004,022	-		OH686_14385	0.87	-3.6
3,004,022	-		OH686_14385	0.87	-2.6
3,004,022	-		OH686_14385	0.87	-1.1
3,004,031	+		OH686_14385	0.88	-0.7
3,004,031	+		OH686_14385	0.88	-4.6
3,004,031	+		OH686_14385	0.88	-0.7
3,004,031	+		OH686_14385	0.88	-1.6
3,004,031	+		OH686_14385	0.88	-2.2
3,004,031	+		OH686_14385	0.88	-3.4
3,004,031	+		OH686_14385	0.88	-2.9
3,004,031	+		OH686_14385	0.88	-2.3
3,004,031	+		OH686_14385	0.88	-4.1
3,004,032	-		OH686_14385	0.88	-3.0
3,004,032	-		OH686_14385	0.88	-3.3
3,004,032	-		OH686_14385	0.88	-4.1
3,004,051	+				-1.2
3,004,051	+				-3.6
3,004,052	-				-3.0
3,004,094	+				-2.6
3,004,095	-				-2.0
3,004,166	-				-2.4
3,004,166	-				-2.8
3,004,166	-				-2.7
3,004,199	+				-2.8
3,004,199	+				-4.1
3,004,199	+				-3.5
3,004,199	+				-4.1
3,004,199	+				-2.1
3,004,199	+				-1.3
3,004,199	+				-2.0
3,004,199	+				-2.4
3,004,199	+				-0.8
3,004,199	+				-2.4
3,004,200	-				-1.4
3,004,200	-				-2.0
3,004,200	-				-3.8
3,004,200	-				-2.1
3,004,200	-				-2.3
3,004,209	+				-3.0
3,004,209	+				-1.6
3,004,210	-				-3.5
3,004,210	-				-2.8
3,004,210	-				-1.8
3,004,210	-				-2.6
3,004,213	+				-3.6
3,004,213	+				-1.4
3,004,213	+				-3.7
3,004,213	+				-1.8
3,004,213	+				-3.2
3,004,213	+				-1.0
3,004,213	+				-1.9
3,004,213	+				-2.4
3,004,214	-				-2.8
3,004,214	-				-2.9
3,004,214	-				-3.0
3,004,225	-				-3.5
3,004,225	-				-1.7
3,004,285	+				-1.1
3,004,286	-				-3.4
3,004,286	-				-3.1
3,004,303	-		OH686_14390	0.11	-3.2
3,004,307	-		OH686_14390	0.11	-2.8
3,004,358	+		OH686_14390	0.15	-2.8
3,004,358	+		OH686_14390	0.15	-3.7
3,004,358	+		OH686_14390	0.15	-2.3
3,004,359	-		OH686_14390	0.15	-1.5
3,004,359	-		OH686_14390	0.15	-2.6
3,004,369	+		OH686_14390	0.16	-2.7
3,004,370	-		OH686_14390	0.16	-2.7
3,004,372	+		OH686_14390	0.16	-1.2
3,004,372	+		OH686_14390	0.16	-2.6
3,004,372	+		OH686_14390	0.16	-1.1
3,004,372	+		OH686_14390	0.16	-1.2
3,004,372	+		OH686_14390	0.16	-2.5
3,004,372	+		OH686_14390	0.16	-2.3
3,004,372	+		OH686_14390	0.16	-3.0
3,004,372	+		OH686_14390	0.16	-2.2
3,004,373	-		OH686_14390	0.16	-3.0
3,004,373	-		OH686_14390	0.16	-2.1
3,004,373	-		OH686_14390	0.16	-3.6
3,004,373	-		OH686_14390	0.16	-0.6
3,004,373	-		OH686_14390	0.16	-2.2
3,004,373	-		OH686_14390	0.16	-3.1
3,004,373	-		OH686_14390	0.16	-2.7
3,004,373	-		OH686_14390	0.16	-1.6
3,004,373	-		OH686_14390	0.16	-3.9
3,004,373	-		OH686_14390	0.16	-1.2
3,004,373	-		OH686_14390	0.16	-2.9
3,004,373	-		OH686_14390	0.16	-5.0
3,004,373	-		OH686_14390	0.16	-2.1
3,004,451	+		OH686_14390	0.23	-1.5
3,004,451	+		OH686_14390	0.23	-2.3
3,004,451	+		OH686_14390	0.23	-3.5
3,004,452	-		OH686_14390	0.23	-1.6
3,004,452	-		OH686_14390	0.23	-2.4
3,004,452	-		OH686_14390	0.23	-3.1
3,004,452	-		OH686_14390	0.23	-1.8
3,004,503	+		OH686_14390	0.27	-3.4
3,004,503	+		OH686_14390	0.27	-2.4
3,004,503	+		OH686_14390	0.27	-3.2
3,004,503	+		OH686_14390	0.27	-5.6
3,004,503	+		OH686_14390	0.27	-1.8
3,004,503	+		OH686_14390	0.27	-3.6
3,004,504	-		OH686_14390	0.27	-2.1
3,004,504	-		OH686_14390	0.27	-3.0
3,004,504	-		OH686_14390	0.27	-0.8
3,004,504	-		OH686_14390	0.27	-1.2
3,004,504	-		OH686_14390	0.27	-2.3
3,004,504	-		OH686_14390	0.27	-3.3
3,004,504	-		OH686_14390	0.27	-1.7
3,004,504	-		OH686_14390	0.27	-2.9
3,004,687	+		OH686_14390	0.41	-2.2
3,004,687	+		OH686_14390	0.41	-2.7
3,004,706	+		OH686_14390	0.43	-0.6
3,004,708	+		OH686_14390	0.43	-2.1
3,004,708	+		OH686_14390	0.43	-0.2
3,004,708	+		OH686_14390	0.43	-4.3
3,004,708	+		OH686_14390	0.43	-3.1
3,004,708	+		OH686_14390	0.43	-1.4
3,004,709	-		OH686_14390	0.43	-3.7
3,004,736	+		OH686_14390	0.45	-4.2
3,004,736	+		OH686_14390	0.45	-2.6
3,004,736	+		OH686_14390	0.45	-2.8
3,004,736	+		OH686_14390	0.45	-2.2
3,004,737	-		OH686_14390	0.45	-2.6
3,004,737	-		OH686_14390	0.45	-1.1
3,004,737	-		OH686_14390	0.45	-4.2
3,004,737	-		OH686_14390	0.45	-2.2
3,004,737	-		OH686_14390	0.45	-2.9
3,004,737	-		OH686_14390	0.45	-1.7
3,004,737	-		OH686_14390	0.45	-2.1
3,004,749	+		OH686_14390	0.46	-2.1
3,004,750	-		OH686_14390	0.46	-2.8
3,004,873	+		OH686_14390	0.56	-3.9
3,004,948	-		OH686_14390	0.62	-3.4
3,004,948	-		OH686_14390	0.62	-0.6
3,005,045	-		OH686_14390	0.69	-2.5
3,005,045	-		OH686_14390	0.69	-3.9
3,005,090	+		OH686_14390	0.73	-0.6
3,005,091	-		OH686_14390	0.73	-2.7
3,005,091	-		OH686_14390	0.73	-3.2
3,005,091	-		OH686_14390	0.73	-2.5
3,005,091	-		OH686_14390	0.73	-2.4
3,005,127	+		OH686_14390	0.76	-3.6
3,005,127	+		OH686_14390	0.76	-2.1
3,005,127	+		OH686_14390	0.76	-2.0
3,005,127	+		OH686_14390	0.76	-3.2
3,005,127	+		OH686_14390	0.76	-2.0
3,005,127	+		OH686_14390	0.76	-4.5
3,005,127	+		OH686_14390	0.76	-3.6
3,005,127	+		OH686_14390	0.76	-2.4
3,005,127	+		OH686_14390	0.76	-1.3
3,005,127	+		OH686_14390	0.76	-3.6
3,005,127	+		OH686_14390	0.76	-2.6
3,005,127	+		OH686_14390	0.76	-4.2
3,005,127	+		OH686_14390	0.76	-2.7
3,005,128	-		OH686_14390	0.76	-2.9
3,005,128	-		OH686_14390	0.76	-4.9
3,005,128	-		OH686_14390	0.76	-1.5
3,005,128	-		OH686_14390	0.76	-1.6
3,005,128	-		OH686_14390	0.76	-3.5
3,005,128	-		OH686_14390	0.76	-3.1