Strain Fitness in Pseudomonas sp. S08-1 around OH686_11280

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
2,322,867	+		OH686_11275	0.38	-0.3
2,322,867	+		OH686_11275	0.38	-1.3
2,322,867	+		OH686_11275	0.38	-2.8
2,322,868	-		OH686_11275	0.38	-1.7
2,322,868	-		OH686_11275	0.38	-1.7
2,322,868	-		OH686_11275	0.38	-1.7
2,322,868	-		OH686_11275	0.38	-0.1
2,323,203	+		OH686_11275	0.60	-0.0
2,323,203	+		OH686_11275	0.60	-1.6
2,323,203	+		OH686_11275	0.60	-0.6
2,323,203	+		OH686_11275	0.60	-2.6
2,323,203	+		OH686_11275	0.60	-0.3
2,323,204	-		OH686_11275	0.60	-1.1
2,323,204	-		OH686_11275	0.60	-0.3
2,323,204	-		OH686_11275	0.60	+0.7
2,323,204	-		OH686_11275	0.60	-2.0
2,323,204	-		OH686_11275	0.60	-0.8
2,323,204	-		OH686_11275	0.60	-2.1
2,323,272	+		OH686_11275	0.65	+0.2
2,323,428	+		OH686_11275	0.75	-2.3
2,323,429	-		OH686_11275	0.75	+0.0
2,323,429	-		OH686_11275	0.75	+0.7
2,323,434	+		OH686_11275	0.76	-1.3
2,323,434	+		OH686_11275	0.76	-0.1
2,323,435	-		OH686_11275	0.76	-0.3
2,323,452	+		OH686_11275	0.77	-0.9
2,323,453	-		OH686_11275	0.77	+1.5
2,323,520	-		OH686_11275	0.81	-1.5
2,323,826	+				-0.7
2,323,826	+				+0.2
2,323,827	-				-0.9
2,323,827	-				-0.2
2,323,827	-				-0.1
2,323,827	-				+0.3
2,323,827	-				+0.4
2,323,860	+				+0.8
2,323,860	+				+0.6
2,323,860	+				-0.4
2,323,860	+				-0.4
2,323,861	-				+0.2
2,323,861	-				-1.3
2,323,861	-				-0.2
2,323,861	-				-1.0
2,323,861	-				-0.5
2,323,861	-				-0.2
2,323,861	-				-0.4
2,323,861	-				-0.2
2,323,927	-				-3.3
2,323,953	+				-1.9
2,323,953	+				-3.1
2,323,954	-				-2.8
2,323,954	-				-2.9
2,323,954	-				-4.9
2,323,954	-				-3.2
2,324,131	+		OH686_11280	0.22	-4.5
2,324,131	+		OH686_11280	0.22	-2.8
2,324,131	+		OH686_11280	0.22	-4.6
2,324,132	-		OH686_11280	0.22	-0.2
2,324,132	-		OH686_11280	0.22	-2.3
2,324,132	-		OH686_11280	0.22	+0.4
2,324,132	-		OH686_11280	0.22	-1.7
2,324,132	-		OH686_11280	0.22	-2.9
2,324,145	+		OH686_11280	0.23	-0.2
2,324,145	+		OH686_11280	0.23	-1.7
2,324,146	-		OH686_11280	0.23	-1.1
2,324,146	-		OH686_11280	0.23	-0.2
2,324,146	-		OH686_11280	0.23	-1.4
2,324,146	-		OH686_11280	0.23	-0.2
2,324,489	+		OH686_11280	0.51	-0.2
2,324,489	+		OH686_11280	0.51	-1.2
2,324,490	-		OH686_11280	0.51	-0.8
2,324,490	-		OH686_11280	0.51	-1.6
2,324,490	-		OH686_11280	0.51	-0.2
2,324,550	+		OH686_11280	0.56	-0.2
2,324,773	-		OH686_11280	0.74	-0.6
2,324,979	+				-2.4
2,324,979	+				-0.6
2,324,980	-				-1.7
2,324,994	+				-0.8
2,324,994	+				-1.4
2,325,095	-				+0.9
2,325,095	-				-0.1
2,325,095	-				+0.9
2,325,189	+				-2.5
2,325,189	+				-2.7
2,325,189	+				-1.4
2,325,189	+				-0.7
2,325,189	+				-1.7
2,325,189	+				-0.8
2,325,189	+				-2.9
2,325,190	-				-0.8
2,325,190	-				-0.8
2,325,190	-				-0.7
2,325,190	-				+1.3
2,325,190	-				+0.2
2,325,190	-				+0.8
2,325,190	-				+0.1
2,325,194	+				-0.5
2,325,194	+				-1.2
2,325,194	+				-0.2
2,325,195	-				+1.8
2,325,195	-				+0.3
2,325,199	+				+0.3
2,325,199	+				+0.1
2,325,199	+				-2.2
2,325,199	+				-0.2
2,325,200	-				+0.1
2,325,200	-				-0.8
2,325,200	-				-0.4
2,325,200	-				-0.5
2,325,200	-				-0.2
2,325,552	+		OH686_11285	0.20	-0.4
2,325,552	+		OH686_11285	0.20	-1.9
2,325,552	+		OH686_11285	0.20	-3.2
2,325,552	+		OH686_11285	0.20	-1.2
2,325,552	+		OH686_11285	0.20	-1.8
2,325,552	+		OH686_11285	0.20	-2.2
2,325,552	+		OH686_11285	0.20	-3.1
2,325,552	+		OH686_11285	0.20	-2.6
2,325,553	-		OH686_11285	0.20	-1.8
2,325,553	-		OH686_11285	0.20	-2.9
2,325,553	-		OH686_11285	0.20	-3.6
2,325,553	-		OH686_11285	0.20	-1.8
2,325,553	-		OH686_11285	0.20	-2.4
2,325,553	-		OH686_11285	0.20	-2.2
2,325,636	+		OH686_11285	0.26	-2.3
2,325,636	+		OH686_11285	0.26	-1.6
2,325,636	+		OH686_11285	0.26	-4.3
2,325,636	+		OH686_11285	0.26	-2.5
2,325,636	+		OH686_11285	0.26	-0.5
2,325,636	+		OH686_11285	0.26	-1.6
2,325,636	+		OH686_11285	0.26	-2.1
2,325,636	+		OH686_11285	0.26	-2.1
2,325,637	-		OH686_11285	0.26	-1.7
2,325,637	-		OH686_11285	0.26	-2.1
2,325,637	-		OH686_11285	0.26	-0.2
2,325,637	-		OH686_11285	0.26	-2.4
2,325,637	-		OH686_11285	0.26	-2.0
2,325,657	+		OH686_11285	0.27	-2.4
2,325,657	+		OH686_11285	0.27	-1.0
2,325,657	+		OH686_11285	0.27	-2.1
2,325,657	+		OH686_11285	0.27	-2.4
2,325,657	+		OH686_11285	0.27	-2.6
2,325,657	+		OH686_11285	0.27	-3.6
2,325,657	+		OH686_11285	0.27	-1.4
2,325,657	+		OH686_11285	0.27	-1.7
2,325,657	+		OH686_11285	0.27	-2.4
2,325,657	+		OH686_11285	0.27	-1.4
2,325,657	+		OH686_11285	0.27	-2.2
2,325,657	+		OH686_11285	0.27	-1.3
2,325,657	+		OH686_11285	0.27	-2.1
2,325,658	-		OH686_11285	0.27	-1.6
2,325,658	-		OH686_11285	0.27	-1.3
2,325,660	+		OH686_11285	0.28	-2.7
2,325,660	+		OH686_11285	0.28	-1.6
2,325,660	+		OH686_11285	0.28	-1.9
2,325,823	+		OH686_11285	0.39	-2.4
2,325,823	+		OH686_11285	0.39	-1.9
2,325,823	+		OH686_11285	0.39	-1.6
2,325,823	+		OH686_11285	0.39	-1.5
2,325,823	+		OH686_11285	0.39	-2.1
2,325,823	+		OH686_11285	0.39	-1.5
2,325,823	+		OH686_11285	0.39	-1.2
2,325,824	-		OH686_11285	0.39	-1.8
2,325,824	-		OH686_11285	0.39	-1.2
2,325,824	-		OH686_11285	0.39	-2.7
2,325,824	-		OH686_11285	0.39	-1.8
2,325,824	-		OH686_11285	0.39	-1.9
2,325,824	-		OH686_11285	0.39	-1.3
2,325,824	-		OH686_11285	0.39	-2.5