Strain Fitness in Pseudomonas sp. S08-1 around OH686_11060

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
2,272,094	+		OH686_11035	0.15	-1.3
2,272,094	+		OH686_11035	0.15	-0.9
2,272,094	+		OH686_11035	0.15	-0.0
2,272,094	+		OH686_11035	0.15	+0.9
2,272,094	+		OH686_11035	0.15	-0.6
2,272,095	-		OH686_11035	0.16	+0.1
2,272,095	-		OH686_11035	0.16	+0.3
2,272,095	-		OH686_11035	0.16	+0.1
2,272,211	+				+0.4
2,272,211	+				+0.5
2,272,211	+				+0.9
2,272,211	+				-0.6
2,272,211	+				-0.7
2,272,211	+				-0.7
2,272,211	+				-0.6
2,272,211	+				+0.4
2,272,211	+				+0.3
2,272,211	+				+0.7
2,272,211	+				-0.5
2,272,212	-				-0.4
2,272,212	-				+0.1
2,272,212	-				-1.1
2,272,212	-				-0.1
2,272,212	-				-0.0
2,272,212	-				-0.8
2,272,212	-				+0.6
2,272,212	-				-0.0
2,272,212	-				-0.9
2,272,212	-				-0.3
2,272,212	-				-0.2
2,272,212	-				-0.1
2,272,212	-				+0.3
2,272,212	-				+0.6
2,272,212	-				-0.0
2,272,212	-				+0.4
2,272,212	-				+0.3
2,272,212	-				+0.5
2,272,212	-				-0.5
2,272,212	-				-0.2
2,272,212	-				-0.2
2,272,212	-				+0.4
2,272,256	+		OH686_11045	0.37	+0.0
2,272,256	+		OH686_11045	0.37	+0.2
2,272,256	+		OH686_11045	0.37	+0.3
2,272,256	+		OH686_11045	0.37	-0.9
2,272,256	+		OH686_11045	0.37	+0.6
2,272,256	+		OH686_11045	0.37	-0.8
2,272,257	-		OH686_11045	0.38	-0.4
2,272,257	-		OH686_11045	0.38	+1.1
2,272,257	-		OH686_11045	0.38	+0.2
2,272,257	-		OH686_11045	0.38	+0.3
2,272,257	-		OH686_11045	0.38	+1.1
2,272,257	-		OH686_11045	0.38	+0.2
2,272,257	-		OH686_11045	0.38	+0.4
2,272,317	+				+0.1
2,272,318	-				-0.1
2,272,318	-				-0.3
2,272,442	+		OH686_11050	0.67	-0.6
2,272,442	+		OH686_11050	0.67	-0.3
2,272,442	+		OH686_11050	0.67	+0.4
2,272,442	+		OH686_11050	0.67	-0.9
2,272,442	+		OH686_11050	0.67	-0.2
2,272,442	+		OH686_11050	0.67	+0.5
2,272,442	+		OH686_11050	0.67	-2.3
2,272,443	-		OH686_11050	0.68	-0.3
2,272,443	-		OH686_11050	0.68	-0.2
2,272,443	-		OH686_11050	0.68	-0.1
2,272,443	-		OH686_11050	0.68	+0.6
2,272,443	-		OH686_11050	0.68	-0.5
2,272,460	+		OH686_11050	0.82	-0.6
2,272,506	+				-0.1
2,272,506	+				+1.4
2,272,506	+				+0.1
2,272,506	+				+0.8
2,272,506	+				+0.6
2,272,506	+				-0.1
2,272,506	+				-0.1
2,272,506	+				-0.4
2,272,506	+				+0.8
2,272,507	-				-1.3
2,272,507	-				+0.1
2,272,507	-				+0.2
2,272,507	-				+0.4
2,272,507	-				+0.0
2,272,507	-				-1.4
2,272,507	-				+0.9
2,272,507	-				+1.7
2,272,511	+				-0.2
2,272,511	+				+0.3
2,272,511	+				-1.5
2,272,511	+				-0.6
2,272,511	+				+0.7
2,272,511	+				+0.5
2,272,511	+				+0.9
2,272,512	-				-0.0
2,272,512	-				-0.3
2,272,512	-				-0.7
2,272,530	+				+0.5
2,272,530	+				+0.1
2,272,530	+				+0.2
2,272,530	+				-0.2
2,272,530	+				+0.0
2,272,531	-				-0.8
2,272,531	-				+0.1
2,272,531	-				+0.2
2,272,531	-				+0.1
2,272,531	-				-0.6
2,272,531	-				-0.6
2,272,536	-				-2.4
2,272,536	-				-0.8
2,272,549	+				-0.2
2,272,549	+				+0.3
2,272,549	+				+0.3
2,272,549	+				-1.0
2,272,549	+				-0.4
2,272,550	-				-1.0
2,272,568	+				+0.6
2,272,569	-				+0.5
2,272,584	+				+0.4
2,272,584	+				-0.4
2,272,585	-				-0.2
2,272,626	+		OH686_11055	0.14	+0.4
2,272,626	+		OH686_11055	0.14	-0.0
2,272,626	+		OH686_11055	0.14	-0.3
2,272,627	-		OH686_11055	0.14	+0.1
2,272,627	-		OH686_11055	0.14	+0.4
2,272,627	-		OH686_11055	0.14	+0.4
2,272,627	-		OH686_11055	0.14	-0.3
2,272,627	-		OH686_11055	0.14	+0.6
2,272,627	-		OH686_11055	0.14	+0.1
2,272,627	-		OH686_11055	0.14	-0.2
2,272,749	+		OH686_11055	0.45	-0.1
2,272,749	+		OH686_11055	0.45	-0.3
2,272,749	+		OH686_11055	0.45	+0.7
2,272,749	+		OH686_11055	0.45	-0.0
2,272,749	+		OH686_11055	0.45	-0.0
2,272,749	+		OH686_11055	0.45	+0.0
2,272,749	+		OH686_11055	0.45	-1.0
2,272,749	+		OH686_11055	0.45	+0.2
2,272,749	+		OH686_11055	0.45	-0.5
2,272,749	+		OH686_11055	0.45	+0.8
2,272,749	+		OH686_11055	0.45	-0.3
2,272,749	+		OH686_11055	0.45	-1.1
2,272,749	+		OH686_11055	0.45	+0.3
2,272,749	+		OH686_11055	0.45	+1.2
2,272,749	+		OH686_11055	0.45	+0.1
2,272,749	+		OH686_11055	0.45	+0.1
2,272,749	+		OH686_11055	0.45	-0.1
2,272,750	-		OH686_11055	0.45	-0.5
2,272,750	-		OH686_11055	0.45	-0.2
2,272,750	-		OH686_11055	0.45	+0.0
2,272,750	-		OH686_11055	0.45	-0.0
2,272,750	-		OH686_11055	0.45	+0.4
2,272,750	-		OH686_11055	0.45	+0.3
2,272,750	-		OH686_11055	0.45	+0.7
2,272,750	-		OH686_11055	0.45	-0.1
2,272,750	-		OH686_11055	0.45	-0.3
2,272,750	-		OH686_11055	0.45	+0.5
2,272,750	-		OH686_11055	0.45	-0.9
2,272,750	-		OH686_11055	0.45	-0.9
2,272,751	+		OH686_11055	0.45	-0.1
2,272,785	+		OH686_11055	0.54	-0.4
2,272,785	+		OH686_11055	0.54	-0.1
2,272,785	+		OH686_11055	0.54	+0.8
2,272,785	+		OH686_11055	0.54	-0.4
2,272,786	-		OH686_11055	0.54	-0.6
2,272,786	-		OH686_11055	0.54	-0.4
2,272,899	-		OH686_11055	0.82	+0.4
2,272,950	+				-0.6
2,272,950	+				-0.6
2,272,951	-				+0.1
2,273,033	+				-0.1
2,273,033	+				+1.4
2,273,033	+				+0.4
2,273,033	+				-1.2
2,273,034	-				-0.0
2,273,034	-				-0.2
2,273,034	-				+0.3
2,273,130	-				-2.4
2,273,348	+		OH686_11060	0.20	-0.3
2,273,349	-		OH686_11060	0.21	-0.6
2,273,396	+		OH686_11060	0.24	-1.1
2,273,397	-		OH686_11060	0.24	-2.9
2,273,520	-		OH686_11060	0.32	-0.3
2,273,520	-		OH686_11060	0.32	-1.1
2,273,560	+		OH686_11060	0.34	-2.1
2,273,561	-		OH686_11060	0.34	+0.1
2,273,691	-		OH686_11060	0.43	-2.2
2,273,691	-		OH686_11060	0.43	-1.1
2,273,801	+		OH686_11060	0.50	-0.9
2,273,801	+		OH686_11060	0.50	-1.9
2,273,867	+		OH686_11060	0.54	-0.9
2,274,039	-		OH686_11060	0.65	-0.7
2,274,039	-		OH686_11060	0.65	-1.9
2,274,179	+		OH686_11060	0.74	-0.6
2,274,179	+		OH686_11060	0.74	-0.6
2,274,179	+		OH686_11060	0.74	-1.8
2,274,179	+		OH686_11060	0.74	-1.3
2,274,180	-		OH686_11060	0.74	-0.3
2,274,180	-		OH686_11060	0.74	+0.1
2,274,257	+		OH686_11060	0.79	-1.1
2,274,277	+		OH686_11060	0.81	-0.1
2,274,277	+		OH686_11060	0.81	-0.4
2,274,277	+		OH686_11060	0.81	-0.7
2,274,277	+		OH686_11060	0.81	-0.3
2,274,278	-		OH686_11060	0.81	-1.9
2,274,278	-		OH686_11060	0.81	+0.4
2,274,278	-		OH686_11060	0.81	+0.9
2,274,283	+		OH686_11060	0.81	-0.9
2,274,283	+		OH686_11060	0.81	-0.3
2,274,284	-		OH686_11060	0.81	-1.1
2,274,284	-		OH686_11060	0.81	-0.9
2,274,284	-		OH686_11060	0.81	-2.3
2,274,284	-		OH686_11060	0.81	+1.3
2,274,284	-		OH686_11060	0.81	-1.2
2,274,284	-		OH686_11060	0.81	+1.5
2,274,420	+				-0.9
2,274,420	+				-0.1
2,274,420	+				-2.1
2,274,548	+				+0.4
2,274,548	+				-1.4
2,274,548	+				+0.4
2,274,548	+				-1.1
2,274,548	+				-0.9
2,274,548	+				-0.7
2,274,548	+				-0.6
2,274,548	+				-1.6
2,274,548	+				-0.6
2,274,549	-				-0.9
2,274,549	-				-1.6
2,274,549	-				+0.0
2,274,549	-				-1.7
2,274,559	-				-0.9
2,274,618	-				+0.5
2,274,662	+				-1.1
2,274,663	-				-0.1
2,274,715	-				-0.6
2,274,715	-				+0.6
2,274,715	-				-0.3
2,274,809	+				-0.4
2,274,809	+				-0.7
2,274,809	+				-1.1
2,274,809	+				-1.1
2,274,809	+				+0.7
2,274,809	+				-0.2
2,274,810	-				-0.8
2,274,983	+		OH686_11065	0.28	+1.0
2,274,983	+		OH686_11065	0.28	-0.1
2,274,984	-		OH686_11065	0.28	+0.7
2,274,984	-		OH686_11065	0.28	-0.6
2,274,997	+		OH686_11065	0.30	+0.7
2,274,997	+		OH686_11065	0.30	-0.3
2,274,997	+		OH686_11065	0.30	-1.1
2,274,998	-		OH686_11065	0.30	+0.2
2,274,998	-		OH686_11065	0.30	-0.3
2,275,196	+		OH686_11065	0.52	+0.5
2,275,197	-		OH686_11065	0.52	-0.7
2,275,250	+		OH686_11065	0.58	+0.1
2,275,544	+				-0.7
2,275,544	+				+0.1
2,275,544	+				+0.5
2,275,544	+				-0.9
2,275,545	-				-0.9
2,275,545	-				-0.3
2,275,545	-				+0.7
2,275,545	-				+0.7
2,275,545	-				-1.1