Strain Fitness in Pseudomonas sp. S08-1 around OH686_11020

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
2,269,043	+		OH686_11010	0.22	+0.1
2,269,043	+		OH686_11010	0.22	-0.0
2,269,043	+		OH686_11010	0.22	-0.6
2,269,043	+		OH686_11010	0.22	-0.5
2,269,043	+		OH686_11010	0.22	-2.3
2,269,043	+		OH686_11010	0.22	+0.1
2,269,043	+		OH686_11010	0.22	+0.1
2,269,044	-		OH686_11010	0.22	+0.7
2,269,044	-		OH686_11010	0.22	+0.5
2,269,044	-		OH686_11010	0.22	-0.2
2,269,044	-		OH686_11010	0.22	+0.9
2,269,044	-		OH686_11010	0.22	-0.8
2,269,227	+		OH686_11010	0.66	+0.2
2,269,227	+		OH686_11010	0.66	+0.6
2,269,247	+		OH686_11010	0.71	-0.6
2,269,247	+		OH686_11010	0.71	-0.2
2,269,247	+		OH686_11010	0.71	-1.7
2,269,247	+		OH686_11010	0.71	-1.0
2,269,248	-		OH686_11010	0.71	-0.5
2,269,248	-		OH686_11010	0.71	+0.3
2,269,248	-		OH686_11010	0.71	-0.0
2,269,250	+		OH686_11010	0.71	+0.1
2,269,250	+		OH686_11010	0.71	-1.0
2,269,250	+		OH686_11010	0.71	-0.5
2,269,251	-		OH686_11010	0.72	+0.5
2,269,251	-		OH686_11010	0.72	-0.2
2,269,251	-		OH686_11010	0.72	+0.1
2,269,251	-		OH686_11010	0.72	+0.6
2,269,251	-		OH686_11010	0.72	+0.3
2,269,251	-		OH686_11010	0.72	+0.6
2,269,251	-		OH686_11010	0.72	-1.6
2,269,251	-		OH686_11010	0.72	+0.1
2,269,251	-		OH686_11010	0.72	-0.7
2,269,251	-		OH686_11010	0.72	-0.8
2,269,391	+				-0.4
2,269,391	+				+0.3
2,269,624	+		OH686_11015	0.43	-0.4
2,269,624	+		OH686_11015	0.43	-0.6
2,269,624	+		OH686_11015	0.43	-0.4
2,269,624	+		OH686_11015	0.43	-0.4
2,269,624	+		OH686_11015	0.43	+0.7
2,269,624	+		OH686_11015	0.43	-0.0
2,269,625	-		OH686_11015	0.43	+0.2
2,269,625	-		OH686_11015	0.43	-0.8
2,269,625	-		OH686_11015	0.43	-0.1
2,269,625	-		OH686_11015	0.43	+0.5
2,269,625	-		OH686_11015	0.43	-0.3
2,269,625	-		OH686_11015	0.43	-0.2
2,269,625	-		OH686_11015	0.43	+0.4
2,269,636	+		OH686_11015	0.45	-0.7
2,269,636	+		OH686_11015	0.45	-0.9
2,270,010	+				+0.6
2,270,010	+				+1.0
2,270,010	+				+0.1
2,270,010	+				-0.1
2,270,010	+				+0.7
2,270,010	+				+0.3
2,270,011	-				+0.3
2,270,011	-				+0.8
2,270,011	-				-0.1
2,270,047	-				-0.3
2,270,047	-				+0.1
2,270,097	+		OH686_11020	0.12	-0.3
2,270,097	+		OH686_11020	0.12	-1.2
2,270,097	+		OH686_11020	0.12	+1.2
2,270,097	+		OH686_11020	0.12	-1.6
2,270,097	+		OH686_11020	0.12	-0.4
2,270,097	+		OH686_11020	0.12	+1.0
2,270,098	-		OH686_11020	0.12	+1.1
2,270,098	-		OH686_11020	0.12	+0.5
2,270,098	-		OH686_11020	0.12	+0.3
2,270,098	-		OH686_11020	0.12	-0.0
2,270,098	-		OH686_11020	0.12	-0.4
2,270,098	-		OH686_11020	0.12	-0.0
2,270,633	-		OH686_11020	0.58	+0.3
2,270,688	+		OH686_11020	0.63	-0.0
2,270,688	+		OH686_11020	0.63	-0.3
2,270,689	-		OH686_11020	0.63	+0.1
2,270,689	-		OH686_11020	0.63	-1.1
2,270,689	-		OH686_11020	0.63	+0.1
2,270,695	+		OH686_11020	0.63	+0.4
2,270,696	-		OH686_11020	0.63	+0.3
2,270,703	+		OH686_11020	0.64	-2.1
2,270,742	+		OH686_11020	0.67	+1.4
2,270,742	+		OH686_11020	0.67	-0.3
2,270,742	+		OH686_11020	0.67	+0.1
2,270,742	+		OH686_11020	0.67	+0.9
2,270,742	+		OH686_11020	0.67	-0.4
2,270,742	+		OH686_11020	0.67	-0.2
2,270,742	+		OH686_11020	0.67	-1.1
2,270,742	+		OH686_11020	0.67	-0.4
2,270,742	+		OH686_11020	0.67	-0.1
2,270,743	-		OH686_11020	0.67	-0.7
2,270,743	-		OH686_11020	0.67	+0.7
2,270,743	-		OH686_11020	0.67	+0.3
2,270,743	-		OH686_11020	0.67	+0.8
2,270,743	-		OH686_11020	0.67	-1.2
2,270,743	-		OH686_11020	0.67	-2.3
2,270,743	-		OH686_11020	0.67	+0.3
2,270,743	-		OH686_11020	0.67	+0.1
2,270,743	-		OH686_11020	0.67	+0.3
2,270,850	+		OH686_11020	0.76	+0.7
2,270,850	+		OH686_11020	0.76	+0.0
2,270,850	+		OH686_11020	0.76	-0.0
2,270,850	+		OH686_11020	0.76	+0.1
2,270,850	+		OH686_11020	0.76	-0.0
2,270,850	+		OH686_11020	0.76	+0.5
2,270,850	+		OH686_11020	0.76	+0.2
2,270,850	+		OH686_11020	0.76	+0.5
2,270,850	+		OH686_11020	0.76	-1.3
2,270,851	-		OH686_11020	0.77	-0.3
2,270,851	-		OH686_11020	0.77	-0.0
2,270,851	-		OH686_11020	0.77	+0.2
2,270,851	-		OH686_11020	0.77	-0.1
2,270,851	-		OH686_11020	0.77	+0.0
2,270,851	-		OH686_11020	0.77	-0.4
2,270,851	-		OH686_11020	0.77	-0.1
2,271,137	+				-0.3
2,271,138	-				+0.3
2,271,166	+				-0.5
2,271,166	+				+1.1
2,271,166	+				+0.4
2,271,166	+				+0.3
2,271,166	+				+0.3
2,271,166	+				-0.4
2,271,166	+				-0.4
2,271,166	+				+0.1
2,271,166	+				-0.1
2,271,166	+				+0.1
2,271,166	+				-1.4
2,271,166	+				+0.7
2,271,166	+				-0.1
2,271,167	-				-0.5
2,271,167	-				+1.0
2,271,167	-				-0.1
2,271,167	-				-1.0
2,271,167	-				+0.2
2,271,167	-				-0.6
2,271,167	-				-0.5
2,271,167	-				+0.3
2,271,167	-				+1.0
2,271,167	-				-0.4
2,271,167	-				-0.2
2,271,168	+				-1.4
2,271,168	+				+0.5
2,271,203	+				+2.6
2,271,203	+				+0.6
2,271,203	+				+0.5
2,271,203	+				+0.4
2,271,203	+				-0.5
2,271,203	+				-1.3
2,271,203	+				-0.6
2,271,203	+				-0.4
2,271,203	+				+0.7
2,271,203	+				-0.1
2,271,203	+				-0.2
2,271,204	-				-0.4
2,271,204	-				-0.5
2,271,204	-				+0.3
2,271,205	+				-0.2
2,271,205	+				-0.6
2,271,205	+				-0.9
2,271,205	+				-0.6
2,271,205	+				-1.0
2,271,205	+				-1.4
2,271,205	+				-0.3
2,271,205	+				+0.3
2,271,206	-				-0.1
2,271,206	-				-0.0
2,271,206	-				+0.3
2,271,206	-				+0.9
2,271,206	-				-0.1
2,271,337	+		OH686_11025	0.32	+1.2
2,271,337	+		OH686_11025	0.32	-0.2
2,271,337	+		OH686_11025	0.32	-0.5
2,271,337	+		OH686_11025	0.32	-0.0
2,271,337	+		OH686_11025	0.32	-0.2
2,271,337	+		OH686_11025	0.32	+0.5
2,271,337	+		OH686_11025	0.32	+1.1
2,271,337	+		OH686_11025	0.32	-1.3
2,271,337	+		OH686_11025	0.32	+0.1
2,271,337	+		OH686_11025	0.32	-0.1
2,271,337	+		OH686_11025	0.32	-0.2
2,271,337	+		OH686_11025	0.32	-0.4
2,271,337	+		OH686_11025	0.32	-0.6
2,271,337	+		OH686_11025	0.32	-0.5
2,271,337	+		OH686_11025	0.32	-0.2
2,271,337	+		OH686_11025	0.32	-0.2
2,271,337	+		OH686_11025	0.32	+1.1
2,271,337	+		OH686_11025	0.32	-1.5
2,271,337	+		OH686_11025	0.32	-1.0
2,271,337	+		OH686_11025	0.32	+0.1
2,271,338	-		OH686_11025	0.33	-0.1
2,271,338	-		OH686_11025	0.33	-0.1
2,271,338	-		OH686_11025	0.33	-0.9
2,271,338	-		OH686_11025	0.33	-1.1
2,271,338	-		OH686_11025	0.33	+0.0
2,271,338	-		OH686_11025	0.33	+0.9
2,271,338	-		OH686_11025	0.33	+0.6
2,271,338	-		OH686_11025	0.33	+0.5
2,271,338	-		OH686_11025	0.33	-0.6
2,271,338	-		OH686_11025	0.33	-0.2
2,271,586	+				-0.4
2,271,586	+				+0.2
2,271,586	+				+0.5
2,271,586	+				-0.7
2,271,586	+				+1.1
2,271,586	+				+0.8
2,271,586	+				-0.5
2,271,586	+				-0.4
2,271,586	+				-0.0
2,271,587	-				+0.7
2,271,587	-				-0.5
2,271,587	-				-0.0
2,271,587	-				+1.0
2,271,620	+				-0.0
2,271,621	-				+1.4
2,271,621	-				-0.2
2,271,660	+				+0.4
2,271,661	-				-1.1
2,271,661	-				+0.1
2,271,765	+		OH686_11030	0.18	-0.5
2,271,765	+		OH686_11030	0.18	-0.7
2,271,766	-		OH686_11030	0.18	+0.6
2,271,766	-		OH686_11030	0.18	-0.9
2,271,766	-		OH686_11030	0.18	-0.4
2,271,955	-		OH686_11030	0.76	-0.7
2,271,955	-		OH686_11030	0.76	+0.5
2,271,955	-		OH686_11030	0.76	-0.8
2,271,983	-		OH686_11030	0.85	-1.2
2,271,988	+		OH686_11030	0.86	+0.1
2,271,988	+		OH686_11030	0.86	+0.1
2,271,988	+		OH686_11030	0.86	+0.8
2,271,988	+		OH686_11030	0.86	+0.4
2,271,988	+		OH686_11030	0.86	+0.0
2,271,988	+		OH686_11030	0.86	+0.2
2,271,988	+		OH686_11030	0.86	+0.5
2,271,988	+		OH686_11030	0.86	+0.6
2,271,989	-		OH686_11030	0.87	-1.7
2,271,989	-		OH686_11030	0.87	+0.7
2,271,989	-		OH686_11030	0.87	+0.5
2,271,989	-		OH686_11030	0.87	-0.8
2,271,989	-		OH686_11030	0.87	+1.8
2,271,989	-		OH686_11030	0.87	+0.2
2,271,989	-		OH686_11030	0.87	+1.3
2,271,991	+		OH686_11030	0.87	-0.3
2,271,991	+		OH686_11030	0.87	+0.4
2,271,991	+		OH686_11030	0.87	+0.4
2,271,991	+		OH686_11030	0.87	+0.6
2,271,991	+		OH686_11030	0.87	-0.1
2,271,991	+		OH686_11030	0.87	-1.6
2,271,991	+		OH686_11030	0.87	+2.0
2,271,992	-		OH686_11030	0.88	+0.3
2,271,992	-		OH686_11030	0.88	+0.9
2,271,992	-		OH686_11030	0.88	-0.5
2,271,992	-		OH686_11030	0.88	-0.1
2,271,992	-		OH686_11030	0.88	-0.0
2,271,992	-		OH686_11030	0.88	-0.2
2,271,992	-		OH686_11030	0.88	+1.0
2,271,992	-		OH686_11030	0.88	+0.7
2,271,992	-		OH686_11030	0.88	-0.2
2,272,029	+				-0.1
2,272,030	-				-0.2
2,272,030	-				+0.4
2,272,094	+		OH686_11035	0.15	-1.3
2,272,094	+		OH686_11035	0.15	-0.9
2,272,094	+		OH686_11035	0.15	-0.0
2,272,094	+		OH686_11035	0.15	+0.9
2,272,094	+		OH686_11035	0.15	-0.6
2,272,095	-		OH686_11035	0.16	+0.1
2,272,095	-		OH686_11035	0.16	+0.3
2,272,095	-		OH686_11035	0.16	+0.1