Strain Fitness in Pseudomonas sp. S08-1 around OH686_10405

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
2,129,220	-		OH686_10395	0.68	+0.3
2,129,371	+				+0.7
2,129,372	-				-0.1
2,129,372	-				-0.3
2,129,372	-				-0.7
2,129,435	+				-0.3
2,129,435	+				+0.1
2,129,435	+				+0.1
2,129,435	+				+0.0
2,129,435	+				+0.3
2,129,436	-				+0.3
2,129,439	+				+0.3
2,129,439	+				+0.1
2,129,439	+				-0.0
2,129,439	+				-0.1
2,129,439	+				-0.9
2,129,439	+				+0.4
2,129,440	-				+0.6
2,129,440	-				-0.0
2,129,440	-				+1.3
2,129,440	-				-0.0
2,129,440	-				+0.1
2,129,440	-				-0.7
2,129,441	+				-0.2
2,129,441	+				+0.4
2,129,441	+				+0.6
2,129,441	+				-0.2
2,129,441	+				-0.5
2,129,441	+				+0.5
2,129,441	+				-0.8
2,129,441	+				-1.0
2,129,441	+				-0.0
2,129,441	+				+0.7
2,129,441	+				+0.4
2,129,441	+				+1.1
2,129,441	+				+0.5
2,129,441	+				+0.6
2,129,441	+				+1.7
2,129,441	+				+0.7
2,129,441	+				-0.3
2,129,441	+				+0.5
2,129,441	+				+0.3
2,129,441	+				+0.1
2,129,441	+				+0.1
2,129,441	+				+0.8
2,129,441	+				+1.4
2,129,441	+				+0.5
2,129,441	+				-0.6
2,129,442	-				-0.3
2,129,442	-				+0.7
2,129,442	-				-1.1
2,129,442	-				+0.7
2,129,442	-				-0.1
2,129,442	-				-0.1
2,129,442	-				+0.4
2,129,442	-				-0.6
2,129,442	-				+0.1
2,129,442	-				+0.0
2,129,442	-				-0.2
2,129,442	-				+0.6
2,129,442	-				-0.1
2,129,442	-				-0.2
2,129,442	-				-0.3
2,129,442	-				-0.3
2,129,442	-				+0.1
2,129,442	-				-0.8
2,129,442	-				+0.4
2,129,442	-				+0.1
2,129,442	-				-0.7
2,129,442	-				-0.1
2,129,442	-				-0.4
2,129,442	-				-0.0
2,129,442	-				+0.5
2,129,462	+		OH686_10400	0.12	-1.0
2,129,462	+		OH686_10400	0.12	-0.5
2,129,462	+		OH686_10400	0.12	+0.9
2,129,462	+		OH686_10400	0.12	-1.5
2,129,462	+		OH686_10400	0.12	+0.3
2,129,462	+		OH686_10400	0.12	+0.4
2,129,462	+		OH686_10400	0.12	+2.8
2,129,462	+		OH686_10400	0.12	-0.1
2,129,462	+		OH686_10400	0.12	+0.1
2,129,462	+		OH686_10400	0.12	-0.9
2,129,462	+		OH686_10400	0.12	+0.4
2,129,463	-		OH686_10400	0.12	+0.0
2,129,463	-		OH686_10400	0.12	-0.1
2,129,463	-		OH686_10400	0.12	-0.1
2,129,463	-		OH686_10400	0.12	-0.2
2,129,463	-		OH686_10400	0.12	-0.5
2,129,463	-		OH686_10400	0.12	-1.0
2,129,463	-		OH686_10400	0.12	-0.6
2,129,463	-		OH686_10400	0.12	+0.2
2,129,463	-		OH686_10400	0.12	-0.5
2,129,612	+		OH686_10400	0.44	+0.3
2,129,612	+		OH686_10400	0.44	+1.1
2,129,612	+		OH686_10400	0.44	-0.2
2,129,612	+		OH686_10400	0.44	-2.2
2,129,612	+		OH686_10400	0.44	+0.4
2,129,613	-		OH686_10400	0.44	-0.3
2,129,613	-		OH686_10400	0.44	-1.4
2,129,613	-		OH686_10400	0.44	+0.6
2,129,613	-		OH686_10400	0.44	-1.3
2,129,613	-		OH686_10400	0.44	+0.8
2,129,666	+		OH686_10400	0.55	+0.4
2,129,667	-		OH686_10400	0.56	-0.3
2,129,789	+		OH686_10400	0.82	-0.5
2,129,801	+		OH686_10400	0.84	+1.3
2,129,801	+		OH686_10400	0.84	+0.3
2,129,842	+				+0.4
2,129,906	+				+0.1
2,129,906	+				+0.1
2,129,906	+				-0.2
2,129,906	+				+1.0
2,129,907	-				+0.0
2,129,907	-				+1.6
2,129,907	-				+0.2
2,129,908	+				-0.4
2,129,908	+				+0.4
2,129,909	-				+0.0
2,129,978	-				-2.1
2,129,978	-				-0.6
2,129,995	-				-1.2
2,129,997	+				-0.2
2,129,997	+				+0.1
2,129,998	-				-0.7
2,129,998	-				-0.7
2,130,059	+				-3.0
2,130,059	+				-4.3
2,130,059	+				-2.6
2,130,059	+				-2.7
2,130,059	+				-2.7
2,130,059	+				-0.3
2,130,060	-				-1.3
2,130,060	-				-1.7
2,130,060	-				-3.9
2,130,088	+				-2.9
2,130,088	+				-3.5
2,130,088	+				-3.6
2,130,089	-				-3.4
2,130,089	-				-1.9
2,130,089	-				-2.9
2,130,089	-				-2.8
2,130,089	-				-1.6
2,130,280	+		OH686_10405	0.11	-2.6
2,130,280	+		OH686_10405	0.11	-1.9
2,130,280	+		OH686_10405	0.11	-3.0
2,130,280	+		OH686_10405	0.11	-3.7
2,130,280	+		OH686_10405	0.11	-3.6
2,130,281	-		OH686_10405	0.11	-2.7
2,130,281	-		OH686_10405	0.11	-3.8
2,130,307	+		OH686_10405	0.12	-4.5
2,130,307	+		OH686_10405	0.12	+0.3
2,130,454	+		OH686_10405	0.19	-1.1
2,130,454	+		OH686_10405	0.19	-0.9
2,130,454	+		OH686_10405	0.19	-2.4
2,130,455	-		OH686_10405	0.19	-1.6
2,130,455	-		OH686_10405	0.19	-3.2
2,130,517	+		OH686_10405	0.22	-3.4
2,130,517	+		OH686_10405	0.22	-2.2
2,130,517	+		OH686_10405	0.22	-3.9
2,130,517	+		OH686_10405	0.22	-2.3
2,130,517	+		OH686_10405	0.22	-2.0
2,130,517	+		OH686_10405	0.22	-2.4
2,130,517	+		OH686_10405	0.22	-2.1
2,130,616	+		OH686_10405	0.26	-2.5
2,130,616	+		OH686_10405	0.26	-2.2
2,130,616	+		OH686_10405	0.26	-3.0
2,130,616	+		OH686_10405	0.26	-3.3
2,130,616	+		OH686_10405	0.26	-2.8
2,130,616	+		OH686_10405	0.26	-3.3
2,130,617	-		OH686_10405	0.26	-0.6
2,130,617	-		OH686_10405	0.26	-4.4
2,130,617	-		OH686_10405	0.26	-2.6
2,130,617	-		OH686_10405	0.26	-4.0
2,130,617	-		OH686_10405	0.26	-1.4
2,130,617	-		OH686_10405	0.26	-0.7
2,130,617	-		OH686_10405	0.26	-1.6
2,130,904	+		OH686_10405	0.40	-1.6
2,130,905	-		OH686_10405	0.40	-2.5
2,130,978	+		OH686_10405	0.43	+0.1
2,130,979	-		OH686_10405	0.43	-1.1
2,131,000	+		OH686_10405	0.44	-1.6
2,131,000	+		OH686_10405	0.44	-1.6
2,131,000	+		OH686_10405	0.44	-3.4
2,131,001	-		OH686_10405	0.44	-2.7
2,131,001	-		OH686_10405	0.44	-2.0
2,131,059	+		OH686_10405	0.47	-1.4
2,131,060	-		OH686_10405	0.47	-3.1
2,131,213	+		OH686_10405	0.54	-3.3
2,131,213	+		OH686_10405	0.54	-1.8
2,131,213	+		OH686_10405	0.54	-2.6
2,131,213	+		OH686_10405	0.54	-3.2
2,131,214	-		OH686_10405	0.54	-1.9
2,131,214	-		OH686_10405	0.54	-4.2
2,131,214	-		OH686_10405	0.54	-2.3
2,131,507	+		OH686_10405	0.67	-2.5
2,131,508	-		OH686_10405	0.67	-3.2
2,131,508	-		OH686_10405	0.67	-0.8
2,131,696	+		OH686_10405	0.76	-2.8
2,131,696	+		OH686_10405	0.76	-1.8
2,131,696	+		OH686_10405	0.76	-3.1
2,131,697	-		OH686_10405	0.76	-1.6
2,131,697	-		OH686_10405	0.76	-2.3
2,131,712	+		OH686_10405	0.77	-2.1
2,131,713	-		OH686_10405	0.77	-2.0
2,131,713	-		OH686_10405	0.77	-2.5
2,131,713	-		OH686_10405	0.77	-3.0
2,131,713	-		OH686_10405	0.77	-4.0
2,131,713	-		OH686_10405	0.77	-2.2
2,131,855	+		OH686_10405	0.83	-2.3
2,131,856	-		OH686_10405	0.83	-3.2
2,131,856	-		OH686_10405	0.83	-1.7
2,131,938	+		OH686_10405	0.87	-1.1
2,132,068	+				-1.7
2,132,158	+				-4.8
2,132,158	+				-2.1
2,132,215	+				+0.0
2,132,215	+				-1.8
2,132,215	+				+0.5
2,132,215	+				+0.5
2,132,216	-				-2.2
2,132,216	-				+0.5
2,132,216	-				-3.4
2,132,216	-				-2.7
2,132,216	-				-0.7
2,132,216	-				-0.6
2,132,316	+				-0.9
2,132,316	+				+1.2
2,132,317	-				-0.2
2,132,317	-				+0.2
2,132,415	+				-0.4
2,132,456	+				-0.4
2,132,456	+				+0.1
2,132,456	+				+0.4
2,132,457	-				-0.0
2,132,457	-				+0.5
2,132,457	-				+0.4
2,132,457	-				-1.6
2,132,457	-				+0.4
2,132,457	-				+0.4
2,132,460	+				+1.2
2,132,460	+				-0.3
2,132,460	+				-0.2
2,132,460	+				+1.3
2,132,460	+				+0.3
2,132,460	+				-0.5
2,132,460	+				-0.3
2,132,460	+				-0.9
2,132,460	+				-1.7
2,132,460	+				+0.4
2,132,460	+				-0.3
2,132,460	+				+0.0
2,132,460	+				-0.3
2,132,460	+				-0.1
2,132,460	+				-0.7
2,132,461	-				+0.1
2,132,461	-				-0.4
2,132,461	-				-1.0
2,132,461	-				-0.5
2,132,461	-				+0.1
2,132,461	-				-0.5
2,132,461	-				+1.0
2,132,461	-				-0.9
2,132,461	-				-0.6
2,132,461	-				+0.8
2,132,461	-				+1.3
2,132,461	-				+0.2
2,132,461	-				+0.2
2,132,610	-				+0.1
2,132,652	+				-1.0
2,132,653	-				-0.1
2,132,855	-		OH686_10410	0.15	-0.8
2,132,855	-		OH686_10410	0.15	-1.9
2,132,887	+		OH686_10410	0.17	-0.0
2,132,887	+		OH686_10410	0.17	-0.2
2,132,887	+		OH686_10410	0.17	-0.1
2,132,887	+		OH686_10410	0.17	+1.2
2,132,887	+		OH686_10410	0.17	+0.1
2,132,887	+		OH686_10410	0.17	+0.3
2,132,887	+		OH686_10410	0.17	+0.8
2,132,887	+		OH686_10410	0.17	+0.1
2,132,887	+		OH686_10410	0.17	+0.6
2,132,887	+		OH686_10410	0.17	-0.6
2,132,888	-		OH686_10410	0.17	+0.3
2,132,888	-		OH686_10410	0.17	+0.1
2,132,888	-		OH686_10410	0.17	-0.2
2,132,888	-		OH686_10410	0.17	+0.8
2,132,888	-		OH686_10410	0.17	-0.1
2,132,894	-		OH686_10410	0.18	+0.1
2,132,929	+		OH686_10410	0.19	+0.1
2,132,929	+		OH686_10410	0.19	-0.7
2,132,930	-		OH686_10410	0.20	-0.3
2,132,930	-		OH686_10410	0.20	+0.7
2,132,930	-		OH686_10410	0.20	-0.1
2,133,010	+		OH686_10410	0.24	-0.9
2,133,010	+		OH686_10410	0.24	-1.2
2,133,010	+		OH686_10410	0.24	+0.3
2,133,010	+		OH686_10410	0.24	+0.6
2,133,010	+		OH686_10410	0.24	+0.1
2,133,010	+		OH686_10410	0.24	+0.7
2,133,010	+		OH686_10410	0.24	+0.9
2,133,010	+		OH686_10410	0.24	-0.1
2,133,011	-		OH686_10410	0.24	-0.8
2,133,011	-		OH686_10410	0.24	+0.0
2,133,011	-		OH686_10410	0.24	+0.7
2,133,011	-		OH686_10410	0.24	-0.1
2,133,011	-		OH686_10410	0.24	+0.3
2,133,011	-		OH686_10410	0.24	-1.8
2,133,011	-		OH686_10410	0.24	-0.3
2,133,011	-		OH686_10410	0.24	-1.7
2,133,011	-		OH686_10410	0.24	-0.2
2,133,011	-		OH686_10410	0.24	+0.6
2,133,181	+		OH686_10410	0.34	+0.1
2,133,181	+		OH686_10410	0.34	-0.8
2,133,181	+		OH686_10410	0.34	+0.6
2,133,181	+		OH686_10410	0.34	-0.8
2,133,181	+		OH686_10410	0.34	-0.9
2,133,181	+		OH686_10410	0.34	-1.1
2,133,181	+		OH686_10410	0.34	+0.4
2,133,181	+		OH686_10410	0.34	-0.7
2,133,181	+		OH686_10410	0.34	+0.7
2,133,181	+		OH686_10410	0.34	+0.5
2,133,182	-		OH686_10410	0.34	-0.4
2,133,182	-		OH686_10410	0.34	-1.3
2,133,182	-		OH686_10410	0.34	+0.1
2,133,182	-		OH686_10410	0.34	-0.1
2,133,182	-		OH686_10410	0.34	+0.2
2,133,182	-		OH686_10410	0.34	-0.3
2,133,182	-		OH686_10410	0.34	+0.8
2,133,182	-		OH686_10410	0.34	-0.8
2,133,182	-		OH686_10410	0.34	-0.3