Strain Fitness in Pseudomonas sp. S08-1 around OH686_09800

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
2,004,686	+		OH686_09795	0.62	-0.1
2,004,686	+		OH686_09795	0.62	-0.5
2,004,686	+		OH686_09795	0.62	-1.1
2,004,686	+		OH686_09795	0.62	+0.5
2,004,686	+		OH686_09795	0.62	+1.0
2,004,686	+		OH686_09795	0.62	+1.0
2,004,686	+		OH686_09795	0.62	+0.7
2,004,686	+		OH686_09795	0.62	-0.1
2,004,686	+		OH686_09795	0.62	+0.3
2,004,687	-		OH686_09795	0.63	-0.0
2,004,687	-		OH686_09795	0.63	+1.1
2,004,687	-		OH686_09795	0.63	-0.0
2,004,687	-		OH686_09795	0.63	-0.3
2,004,687	-		OH686_09795	0.63	+1.3
2,004,687	-		OH686_09795	0.63	-0.0
2,004,687	-		OH686_09795	0.63	-0.0
2,004,687	-		OH686_09795	0.63	-0.9
2,004,687	-		OH686_09795	0.63	-0.5
2,004,687	-		OH686_09795	0.63	-3.1
2,004,687	-		OH686_09795	0.63	-0.7
2,004,851	+		OH686_09795	0.72	+0.2
2,004,851	+		OH686_09795	0.72	+0.4
2,004,852	-		OH686_09795	0.72	+0.5
2,004,852	-		OH686_09795	0.72	+0.6
2,004,852	-		OH686_09795	0.72	+0.8
2,004,852	-		OH686_09795	0.72	+1.0
2,004,970	+		OH686_09795	0.79	+0.0
2,004,970	+		OH686_09795	0.79	+0.4
2,004,970	+		OH686_09795	0.79	+0.6
2,004,970	+		OH686_09795	0.79	-0.1
2,005,136	+		OH686_09795	0.88	-0.6
2,005,337	+				+1.2
2,005,337	+				-1.4
2,005,337	+				-0.6
2,005,337	+				+0.3
2,005,337	+				+0.2
2,005,338	-				+0.2
2,005,338	-				+0.4
2,005,387	+				+0.2
2,005,387	+				+1.3
2,005,387	+				+0.7
2,005,387	+				+0.2
2,005,387	+				-0.0
2,005,387	+				-0.4
2,005,388	-				-1.3
2,005,388	-				-0.2
2,005,388	-				-0.7
2,005,388	-				-0.0
2,005,393	+				+0.6
2,006,274	+		OH686_09800	0.26	-0.4
2,006,275	-		OH686_09800	0.26	+0.3
2,006,424	+		OH686_09800	0.30	-1.3
2,006,424	+		OH686_09800	0.30	-0.3
2,006,499	+		OH686_09800	0.32	-0.5
2,006,499	+		OH686_09800	0.32	-1.6
2,006,499	+		OH686_09800	0.32	-1.3
2,006,500	-		OH686_09800	0.32	-1.6
2,006,550	+		OH686_09800	0.34	-1.4
2,006,550	+		OH686_09800	0.34	-1.4
2,006,550	+		OH686_09800	0.34	-0.3
2,006,550	+		OH686_09800	0.34	-1.7
2,006,550	+		OH686_09800	0.34	-0.6
2,006,550	+		OH686_09800	0.34	-0.2
2,006,551	-		OH686_09800	0.34	-0.3
2,006,602	+		OH686_09800	0.35	-2.1
2,006,602	+		OH686_09800	0.35	-0.5
2,006,602	+		OH686_09800	0.35	-0.7
2,006,602	+		OH686_09800	0.35	-1.9
2,006,603	-		OH686_09800	0.35	-1.5
2,006,603	-		OH686_09800	0.35	-3.1
2,006,603	-		OH686_09800	0.35	-2.2
2,006,647	+		OH686_09800	0.37	-1.2
2,006,647	+		OH686_09800	0.37	-0.8
2,006,647	+		OH686_09800	0.37	-2.1
2,006,648	-		OH686_09800	0.37	-1.8
2,006,648	-		OH686_09800	0.37	-1.3
2,006,648	-		OH686_09800	0.37	-2.3
2,006,648	-		OH686_09800	0.37	-2.2
2,006,648	-		OH686_09800	0.37	-2.0
2,006,961	+		OH686_09800	0.46	-0.7
2,006,961	+		OH686_09800	0.46	-2.0
2,007,000	+		OH686_09800	0.47	-3.7
2,007,000	+		OH686_09800	0.47	-1.7
2,007,000	+		OH686_09800	0.47	-1.6
2,007,000	+		OH686_09800	0.47	-1.4
2,007,001	-		OH686_09800	0.47	-1.6
2,007,001	-		OH686_09800	0.47	-0.3
2,007,001	-		OH686_09800	0.47	-1.7
2,007,177	+		OH686_09800	0.53	-0.6
2,007,177	+		OH686_09800	0.53	-1.4
2,007,177	+		OH686_09800	0.53	-2.3
2,007,177	+		OH686_09800	0.53	-0.6
2,007,177	+		OH686_09800	0.53	-1.3
2,007,177	+		OH686_09800	0.53	-1.4
2,007,177	+		OH686_09800	0.53	-0.6
2,007,177	+		OH686_09800	0.53	-1.6
2,007,177	+		OH686_09800	0.53	-2.2
2,007,177	+		OH686_09800	0.53	-1.1
2,007,178	-		OH686_09800	0.53	-1.3
2,007,178	-		OH686_09800	0.53	-1.3
2,007,178	-		OH686_09800	0.53	-0.6
2,007,178	-		OH686_09800	0.53	-0.3
2,007,178	-		OH686_09800	0.53	-2.0
2,007,178	-		OH686_09800	0.53	+0.0
2,007,178	-		OH686_09800	0.53	-1.3
2,007,178	-		OH686_09800	0.53	-0.8
2,007,178	-		OH686_09800	0.53	-1.3
2,007,178	-		OH686_09800	0.53	-2.3
2,007,186	+		OH686_09800	0.53	-1.7
2,007,248	-		OH686_09800	0.55	-2.3
2,007,248	-		OH686_09800	0.55	-2.6
2,007,248	-		OH686_09800	0.55	-1.8
2,007,248	-		OH686_09800	0.55	-1.0
2,007,248	-		OH686_09800	0.55	-2.6
2,007,248	-		OH686_09800	0.55	-2.8
2,007,253	+		OH686_09800	0.55	-1.3
2,007,253	+		OH686_09800	0.55	-2.6
2,007,253	+		OH686_09800	0.55	+0.7
2,007,253	+		OH686_09800	0.55	-2.9
2,007,254	-		OH686_09800	0.55	-2.5
2,007,254	-		OH686_09800	0.55	-0.7
2,007,254	-		OH686_09800	0.55	-0.8
2,007,254	-		OH686_09800	0.55	-3.1
2,007,519	+		OH686_09800	0.63	-2.0
2,007,522	+		OH686_09800	0.63	-0.6
2,007,522	+		OH686_09800	0.63	-0.3
2,007,522	+		OH686_09800	0.63	-1.5
2,007,522	+		OH686_09800	0.63	-1.4
2,007,522	+		OH686_09800	0.63	-0.3
2,007,522	+		OH686_09800	0.63	-1.5
2,007,522	+		OH686_09800	0.63	-2.0
2,007,522	+		OH686_09800	0.63	-2.4
2,007,522	+		OH686_09800	0.63	-2.1
2,007,522	+		OH686_09800	0.63	-0.3
2,007,522	+		OH686_09800	0.63	-2.1
2,007,523	-		OH686_09800	0.63	-2.1
2,007,523	-		OH686_09800	0.63	+0.3
2,007,523	-		OH686_09800	0.63	-0.8
2,007,523	-		OH686_09800	0.63	+0.7
2,007,523	-		OH686_09800	0.63	-1.9
2,007,523	-		OH686_09800	0.63	-1.4
2,007,523	-		OH686_09800	0.63	-0.6
2,007,523	-		OH686_09800	0.63	-0.8
2,007,523	-		OH686_09800	0.63	-2.3
2,007,523	-		OH686_09800	0.63	-0.6
2,007,523	-		OH686_09800	0.63	+0.4
2,007,525	+		OH686_09800	0.63	+0.4
2,007,525	+		OH686_09800	0.63	-2.5
2,007,525	+		OH686_09800	0.63	-2.8
2,007,525	+		OH686_09800	0.63	-0.3
2,007,525	+		OH686_09800	0.63	-2.8
2,007,525	+		OH686_09800	0.63	-2.0
2,007,525	+		OH686_09800	0.63	-2.0
2,007,525	+		OH686_09800	0.63	-1.6
2,007,525	+		OH686_09800	0.63	-1.0
2,007,525	+		OH686_09800	0.63	-0.8
2,007,525	+		OH686_09800	0.63	-3.1
2,007,525	+		OH686_09800	0.63	-0.7
2,007,525	+		OH686_09800	0.63	+0.4
2,007,525	+		OH686_09800	0.63	-1.4
2,007,526	-		OH686_09800	0.63	-0.8
2,007,526	-		OH686_09800	0.63	-1.3
2,007,526	-		OH686_09800	0.63	-2.6
2,007,526	-		OH686_09800	0.63	-1.6
2,007,526	-		OH686_09800	0.63	-1.6
2,007,526	-		OH686_09800	0.63	-2.9
2,007,526	-		OH686_09800	0.63	-0.7
2,007,526	-		OH686_09800	0.63	-2.6
2,007,526	-		OH686_09800	0.63	-3.0
2,007,526	-		OH686_09800	0.63	-2.8
2,007,526	-		OH686_09800	0.63	-1.4
2,007,526	-		OH686_09800	0.63	-1.9
2,007,526	-		OH686_09800	0.63	-1.2
2,007,567	+		OH686_09800	0.65	-1.3
2,007,567	+		OH686_09800	0.65	-0.1
2,007,567	+		OH686_09800	0.65	-1.2
2,007,568	-		OH686_09800	0.65	-2.0
2,007,568	-		OH686_09800	0.65	-2.3
2,007,568	-		OH686_09800	0.65	-1.3
2,007,568	-		OH686_09800	0.65	-0.7
2,007,568	-		OH686_09800	0.65	-1.0
2,007,642	+		OH686_09800	0.67	-0.3
2,007,642	+		OH686_09800	0.67	-1.3
2,007,643	-		OH686_09800	0.67	-0.8
2,007,703	+		OH686_09800	0.69	-0.1
2,007,703	+		OH686_09800	0.69	-0.5
2,007,703	+		OH686_09800	0.69	-1.8
2,007,704	-		OH686_09800	0.69	-1.4
2,007,704	-		OH686_09800	0.69	-2.7
2,007,704	-		OH686_09800	0.69	-1.8
2,007,704	-		OH686_09800	0.69	-0.5
2,007,797	+		OH686_09800	0.71	-0.3
2,007,797	+		OH686_09800	0.71	-1.7
2,007,797	+		OH686_09800	0.71	-0.7
2,007,797	+		OH686_09800	0.71	-1.0
2,007,797	+		OH686_09800	0.71	-1.3
2,007,797	+		OH686_09800	0.71	-1.3
2,007,797	+		OH686_09800	0.71	-1.2
2,007,797	+		OH686_09800	0.71	-1.4
2,007,797	+		OH686_09800	0.71	-1.8
2,007,797	+		OH686_09800	0.71	-2.1
2,007,797	+		OH686_09800	0.71	-2.3
2,007,797	+		OH686_09800	0.71	+0.2
2,007,797	+		OH686_09800	0.71	-1.9
2,007,797	+		OH686_09800	0.71	-0.1
2,007,797	+		OH686_09800	0.71	-1.7
2,007,798	-		OH686_09800	0.71	-0.6
2,007,798	-		OH686_09800	0.71	-0.6
2,007,798	-		OH686_09800	0.71	-1.5
2,007,798	-		OH686_09800	0.71	-0.7
2,007,798	-		OH686_09800	0.71	-0.8
2,007,798	-		OH686_09800	0.71	-2.6
2,007,798	-		OH686_09800	0.71	-1.1
2,007,798	-		OH686_09800	0.71	-1.1
2,007,798	-		OH686_09800	0.71	-2.1
2,007,798	-		OH686_09800	0.71	-1.6
2,007,798	-		OH686_09800	0.71	-0.1
2,007,798	-		OH686_09800	0.71	-1.0
2,007,798	-		OH686_09800	0.71	-1.6
2,007,798	-		OH686_09800	0.71	+0.2
2,007,798	-		OH686_09800	0.71	-3.5
2,007,801	+		OH686_09800	0.72	-1.6
2,007,801	+		OH686_09800	0.72	-2.9
2,007,801	+		OH686_09800	0.72	-2.6
2,007,801	+		OH686_09800	0.72	-0.9
2,007,801	+		OH686_09800	0.72	-1.8
2,007,801	+		OH686_09800	0.72	-0.8
2,007,801	+		OH686_09800	0.72	-1.1
2,007,801	+		OH686_09800	0.72	-1.3
2,007,801	+		OH686_09800	0.72	-1.6
2,007,801	+		OH686_09800	0.72	-1.5
2,007,801	+		OH686_09800	0.72	-1.0
2,007,801	+		OH686_09800	0.72	-1.0
2,007,801	+		OH686_09800	0.72	-1.3
2,007,801	+		OH686_09800	0.72	-0.4
2,007,802	-		OH686_09800	0.72	-1.3
2,007,802	-		OH686_09800	0.72	-1.1
2,007,802	-		OH686_09800	0.72	-2.1
2,007,802	-		OH686_09800	0.72	-3.2
2,007,802	-		OH686_09800	0.72	-1.1
2,007,802	-		OH686_09800	0.72	-1.9
2,007,802	-		OH686_09800	0.72	-3.0
2,007,802	-		OH686_09800	0.72	-0.8
2,007,802	-		OH686_09800	0.72	-1.2
2,007,802	-		OH686_09800	0.72	-1.7
2,007,802	-		OH686_09800	0.72	-1.7
2,007,837	+		OH686_09800	0.73	-1.0
2,007,837	+		OH686_09800	0.73	-1.8
2,007,837	+		OH686_09800	0.73	-1.6
2,007,837	+		OH686_09800	0.73	-0.1
2,007,838	-		OH686_09800	0.73	-1.7
2,007,858	+		OH686_09800	0.73	-2.1
2,007,859	-		OH686_09800	0.73	-1.4
2,007,864	+		OH686_09800	0.73	-3.3
2,007,865	-		OH686_09800	0.74	+0.2
2,007,865	-		OH686_09800	0.74	-1.6
2,007,865	-		OH686_09800	0.74	-1.6
2,007,919	+		OH686_09800	0.75	-1.6
2,007,919	+		OH686_09800	0.75	-0.7
2,007,920	-		OH686_09800	0.75	-1.1
2,008,030	-		OH686_09800	0.78	-0.8
2,008,053	+		OH686_09800	0.79	-1.4
2,008,053	+		OH686_09800	0.79	-0.5
2,008,053	+		OH686_09800	0.79	-1.1
2,008,054	-		OH686_09800	0.79	-2.6
2,008,054	-		OH686_09800	0.79	-1.1
2,008,321	+		OH686_09800	0.87	-2.6
2,008,321	+		OH686_09800	0.87	+0.0
2,008,321	+		OH686_09800	0.87	-2.2
2,008,321	+		OH686_09800	0.87	-1.1
2,008,321	+		OH686_09800	0.87	-3.1
2,008,322	-		OH686_09800	0.87	+0.6
2,008,322	-		OH686_09800	0.87	-0.6
2,008,322	-		OH686_09800	0.87	-0.7
2,008,401	+		OH686_09800	0.90	-2.6
2,008,401	+		OH686_09800	0.90	-1.6
2,008,402	-		OH686_09800	0.90	-2.0
2,008,402	-		OH686_09800	0.90	-1.3
2,008,480	+				-1.1
2,008,515	+				-1.1
2,008,515	+				-1.8
2,008,515	+				-1.3
2,008,516	-				-0.4
2,008,551	+				-2.1
2,008,551	+				-0.6
2,008,551	+				-1.3
2,008,551	+				-0.7
2,008,551	+				-0.3
2,008,551	+				-1.4
2,008,551	+				-1.8
2,008,551	+				+0.2
2,008,551	+				-1.8
2,008,551	+				-0.5
2,008,551	+				-0.7
2,008,551	+				-1.4
2,008,551	+				-1.7
2,008,552	-				-1.9
2,008,552	-				-1.7
2,008,552	-				-0.9
2,008,552	-				-1.3
2,008,552	-				-0.2
2,008,552	-				-0.3
2,008,552	-				-1.3
2,008,552	-				-2.5
2,008,552	-				-1.8
2,008,552	-				-0.6
2,008,552	-				-0.4
2,008,552	-				-3.1
2,008,552	-				-0.8
2,008,552	-				-0.5
2,008,552	-				-0.5
2,008,552	-				-0.4
2,008,552	-				-1.8
2,008,552	-				-1.2
2,008,552	-				-0.3
2,008,552	-				-1.1
2,008,637	+				+0.1
2,008,882	+				+0.0
2,008,882	+				-1.8
2,008,883	-				-0.5
2,008,883	-				+0.6
2,009,040	+		OH686_09805	0.16	+0.1
2,009,041	-		OH686_09805	0.16	-2.1
2,009,041	-		OH686_09805	0.16	+0.4
2,009,065	-		OH686_09805	0.17	+0.4
2,009,065	-		OH686_09805	0.17	+0.7
2,009,065	-		OH686_09805	0.17	-0.3
2,009,065	-		OH686_09805	0.17	-1.1
2,009,169	+		OH686_09805	0.24	-0.1
2,009,170	-		OH686_09805	0.25	-0.3
2,009,235	+		OH686_09805	0.29	+0.9
2,009,235	+		OH686_09805	0.29	+0.8
2,009,235	+		OH686_09805	0.29	-0.1
2,009,235	+		OH686_09805	0.29	+0.7
2,009,235	+		OH686_09805	0.29	-0.0
2,009,235	+		OH686_09805	0.29	+0.6
2,009,235	+		OH686_09805	0.29	-0.3
2,009,235	+		OH686_09805	0.29	+0.4
2,009,235	+		OH686_09805	0.29	+0.2
2,009,235	+		OH686_09805	0.29	-0.4
2,009,235	+		OH686_09805	0.29	+0.4
2,009,235	+		OH686_09805	0.29	+1.2
2,009,236	-		OH686_09805	0.29	-0.3
2,009,236	-		OH686_09805	0.29	-0.4
2,009,236	-		OH686_09805	0.29	-0.1
2,009,236	-		OH686_09805	0.29	+0.2
2,009,236	-		OH686_09805	0.29	-0.1
2,009,236	-		OH686_09805	0.29	-0.8
2,009,236	-		OH686_09805	0.29	+0.9
2,009,236	-		OH686_09805	0.29	-0.2
2,009,236	-		OH686_09805	0.29	-0.9
2,009,236	-		OH686_09805	0.29	+0.2
2,009,236	-		OH686_09805	0.29	-1.1
2,009,236	-		OH686_09805	0.29	-1.2
2,009,356	+		OH686_09805	0.37	-0.1
2,009,356	+		OH686_09805	0.37	-1.1
2,009,356	+		OH686_09805	0.37	-0.3
2,009,356	+		OH686_09805	0.37	-0.1
2,009,356	+		OH686_09805	0.37	+1.4
2,009,356	+		OH686_09805	0.37	-1.0
2,009,357	-		OH686_09805	0.37	+0.4
2,009,357	-		OH686_09805	0.37	+0.5
2,009,357	-		OH686_09805	0.37	+1.3
2,009,357	-		OH686_09805	0.37	+0.2
2,009,357	-		OH686_09805	0.37	-1.1
2,009,357	-		OH686_09805	0.37	-0.9
2,009,357	-		OH686_09805	0.37	+0.5
2,009,357	-		OH686_09805	0.37	+1.2
2,009,357	-		OH686_09805	0.37	-0.9
2,009,357	-		OH686_09805	0.37	-0.3
2,009,357	-		OH686_09805	0.37	-1.2
2,009,357	-		OH686_09805	0.37	+0.2
2,009,357	-		OH686_09805	0.37	+0.5
2,009,376	+		OH686_09805	0.39	-0.1
2,009,376	+		OH686_09805	0.39	-0.8
2,009,376	+		OH686_09805	0.39	-0.2
2,009,376	+		OH686_09805	0.39	-0.5
2,009,377	-		OH686_09805	0.39	-0.4
2,009,377	-		OH686_09805	0.39	+0.3
2,009,377	-		OH686_09805	0.39	-0.6
2,009,377	-		OH686_09805	0.39	+0.7
2,009,382	+		OH686_09805	0.39	-0.2
2,009,382	+		OH686_09805	0.39	-0.1
2,009,382	+		OH686_09805	0.39	-0.8
2,009,382	+		OH686_09805	0.39	-0.9
2,009,383	-		OH686_09805	0.39	+0.2
2,009,383	-		OH686_09805	0.39	+0.2
2,009,383	-		OH686_09805	0.39	-0.4
2,009,383	-		OH686_09805	0.39	-1.6
2,009,383	-		OH686_09805	0.39	-0.0
2,009,383	-		OH686_09805	0.39	-0.2
2,009,383	-		OH686_09805	0.39	+0.2
2,009,383	-		OH686_09805	0.39	-0.4
2,009,383	-		OH686_09805	0.39	-0.2
2,009,383	-		OH686_09805	0.39	-1.8
2,009,385	+		OH686_09805	0.39	+1.6
2,009,385	+		OH686_09805	0.39	-0.4
2,009,385	+		OH686_09805	0.39	-0.6
2,009,385	+		OH686_09805	0.39	-0.2
2,009,385	+		OH686_09805	0.39	+0.8
2,009,385	+		OH686_09805	0.39	+0.5
2,009,385	+		OH686_09805	0.39	+0.4
2,009,385	+		OH686_09805	0.39	-0.3
2,009,385	+		OH686_09805	0.39	+0.3
2,009,385	+		OH686_09805	0.39	-0.7
2,009,385	+		OH686_09805	0.39	+0.5
2,009,385	+		OH686_09805	0.39	-0.1
2,009,386	-		OH686_09805	0.39	+0.0
2,009,386	-		OH686_09805	0.39	-0.5
2,009,386	-		OH686_09805	0.39	+0.5
2,009,386	-		OH686_09805	0.39	+0.3
2,009,386	-		OH686_09805	0.39	-1.2
2,009,386	-		OH686_09805	0.39	+0.3
2,009,428	+		OH686_09805	0.42	-0.0
2,009,428	+		OH686_09805	0.42	-0.8
2,009,428	+		OH686_09805	0.42	-0.8
2,009,428	+		OH686_09805	0.42	+0.1
2,009,428	+		OH686_09805	0.42	+1.7
2,009,428	+		OH686_09805	0.42	-0.6
2,009,428	+		OH686_09805	0.42	-0.3
2,009,428	+		OH686_09805	0.42	+0.6
2,009,429	-		OH686_09805	0.42	-0.6
2,009,429	-		OH686_09805	0.42	+1.1
2,009,429	-		OH686_09805	0.42	+1.0
2,009,429	-		OH686_09805	0.42	+0.6
2,009,429	-		OH686_09805	0.42	+0.1
2,009,535	+		OH686_09805	0.49	-0.2
2,009,536	-		OH686_09805	0.50	-0.3
2,009,536	-		OH686_09805	0.50	-0.2
2,009,607	+		OH686_09805	0.54	+0.1
2,009,670	+		OH686_09805	0.59	-0.4