Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_07915 and OH686_07920 are separated by 51 nucleotides OH686_07920 and OH686_07925 overlap by 4 nucleotides OH686_07925 and OH686_07930 are separated by 3 nucleotides OH686_07930 and OH686_07935 are separated by 84 nucleotides
OH686_07915: OH686_07915 - glutamyl-tRNA reductase, at 1,617,288 to 1,618,556
_07915
OH686_07920: OH686_07920 - CDS, at 1,618,608 to 1,618,727
_07920
OH686_07925: OH686_07925 - TPR domain protein, at 1,618,724 to 1,620,451
_07925
OH686_07930: OH686_07930 - outer membrane lipoprotein LolB, at 1,620,455 to 1,621,069
_07930
OH686_07935: OH686_07935 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, at 1,621,154 to 1,622,029
_07935
Position (kb)
1618
1619
1620
1621 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1618.599 kb on - strand at 1618.599 kb on - strand at 1618.599 kb on - strand at 1618.719 kb on + strand at 1618.719 kb on + strand at 1618.719 kb on + strand at 1618.719 kb on + strand at 1618.719 kb on + strand at 1618.719 kb on + strand at 1618.720 kb on - strand at 1618.720 kb on - strand at 1618.720 kb on - strand at 1618.720 kb on - strand at 1618.720 kb on - strand at 1618.720 kb on - strand at 1618.720 kb on - strand at 1618.720 kb on - strand at 1618.720 kb on - strand at 1618.720 kb on - strand at 1618.720 kb on - strand at 1618.723 kb on + strand at 1618.723 kb on + strand at 1618.723 kb on + strand at 1618.723 kb on + strand at 1618.723 kb on + strand at 1618.724 kb on - strand at 1618.724 kb on - strand at 1618.856 kb on + strand at 1618.856 kb on + strand at 1618.883 kb on + strand at 1618.883 kb on + strand at 1618.946 kb on + strand, within OH686_07925 at 1618.946 kb on + strand, within OH686_07925 at 1618.946 kb on + strand, within OH686_07925 at 1618.946 kb on + strand, within OH686_07925 at 1618.946 kb on + strand, within OH686_07925 at 1618.946 kb on + strand, within OH686_07925 at 1619.127 kb on - strand, within OH686_07925 at 1619.144 kb on + strand, within OH686_07925 at 1619.144 kb on + strand, within OH686_07925 at 1619.144 kb on + strand, within OH686_07925 at 1619.144 kb on + strand, within OH686_07925 at 1619.144 kb on + strand, within OH686_07925 at 1619.144 kb on + strand, within OH686_07925 at 1619.144 kb on + strand, within OH686_07925 at 1619.144 kb on + strand, within OH686_07925 at 1619.144 kb on + strand, within OH686_07925 at 1619.146 kb on + strand, within OH686_07925 at 1619.501 kb on + strand, within OH686_07925 at 1619.501 kb on + strand, within OH686_07925 at 1619.717 kb on + strand, within OH686_07925 at 1619.717 kb on + strand, within OH686_07925 at 1619.717 kb on + strand, within OH686_07925 at 1619.717 kb on + strand, within OH686_07925 at 1619.717 kb on + strand, within OH686_07925 at 1619.717 kb on + strand, within OH686_07925 at 1619.717 kb on + strand, within OH686_07925 at 1619.717 kb on + strand, within OH686_07925 at 1619.766 kb on + strand, within OH686_07925 at 1619.766 kb on + strand, within OH686_07925 at 1619.885 kb on + strand, within OH686_07925 at 1619.885 kb on + strand, within OH686_07925 at 1619.885 kb on + strand, within OH686_07925 at 1619.900 kb on + strand, within OH686_07925 at 1620.005 kb on + strand, within OH686_07925 at 1620.005 kb on + strand, within OH686_07925 at 1620.005 kb on + strand, within OH686_07925 at 1620.005 kb on + strand, within OH686_07925 at 1620.005 kb on + strand, within OH686_07925 at 1620.005 kb on + strand, within OH686_07925 at 1620.005 kb on + strand, within OH686_07925 at 1620.005 kb on + strand, within OH686_07925 at 1620.005 kb on + strand, within OH686_07925 at 1620.119 kb on + strand, within OH686_07925 at 1620.119 kb on + strand, within OH686_07925 at 1620.214 kb on + strand, within OH686_07925 at 1620.233 kb on + strand, within OH686_07925 at 1620.233 kb on + strand, within OH686_07925 at 1620.233 kb on + strand, within OH686_07925 at 1620.233 kb on + strand, within OH686_07925 at 1620.233 kb on + strand, within OH686_07925 at 1620.233 kb on + strand, within OH686_07925 at 1620.234 kb on - strand, within OH686_07925 at 1620.234 kb on - strand, within OH686_07925 at 1620.234 kb on - strand, within OH686_07925 at 1621.067 kb on + strand at 1621.067 kb on + strand at 1621.068 kb on - strand at 1621.068 kb on - strand at 1621.144 kb on + strand at 1621.144 kb on + strand at 1621.144 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 1,618,599 - +0.3 1,618,599 - -0.2 1,618,599 - +0.4 1,618,719 + -0.5 1,618,719 + +0.7 1,618,719 + -0.2 1,618,719 + -0.3 1,618,719 + +0.4 1,618,719 + -0.0 1,618,720 - +0.4 1,618,720 - -0.2 1,618,720 - -0.7 1,618,720 - -0.9 1,618,720 - -0.6 1,618,720 - +0.6 1,618,720 - -0.6 1,618,720 - -1.4 1,618,720 - +0.2 1,618,720 - +0.2 1,618,720 - +1.4 1,618,723 + -0.2 1,618,723 + +0.1 1,618,723 + +1.0 1,618,723 + -0.7 1,618,723 + -0.8 1,618,724 - -1.8 1,618,724 - -1.9 1,618,856 + -1.7 1,618,856 + -3.1 1,618,883 + +0.7 1,618,883 + -3.1 1,618,946 + OH686_07925 0.13 -1.1 1,618,946 + OH686_07925 0.13 -0.6 1,618,946 + OH686_07925 0.13 -1.4 1,618,946 + OH686_07925 0.13 -0.3 1,618,946 + OH686_07925 0.13 -1.7 1,618,946 + OH686_07925 0.13 -1.1 1,619,127 - OH686_07925 0.23 -1.7 1,619,144 + OH686_07925 0.24 -1.5 1,619,144 + OH686_07925 0.24 -1.2 1,619,144 + OH686_07925 0.24 -3.2 1,619,144 + OH686_07925 0.24 -0.7 1,619,144 + OH686_07925 0.24 -2.8 1,619,144 + OH686_07925 0.24 -3.2 1,619,144 + OH686_07925 0.24 -0.6 1,619,144 + OH686_07925 0.24 -2.8 1,619,144 + OH686_07925 0.24 -2.3 1,619,146 + OH686_07925 0.24 -0.8 1,619,501 + OH686_07925 0.45 -1.5 1,619,501 + OH686_07925 0.45 -0.8 1,619,717 + OH686_07925 0.57 -1.3 1,619,717 + OH686_07925 0.57 -3.4 1,619,717 + OH686_07925 0.57 -3.5 1,619,717 + OH686_07925 0.57 -1.8 1,619,717 + OH686_07925 0.57 -2.9 1,619,717 + OH686_07925 0.57 -0.9 1,619,717 + OH686_07925 0.57 -1.3 1,619,717 + OH686_07925 0.57 -2.7 1,619,766 + OH686_07925 0.60 -0.8 1,619,766 + OH686_07925 0.60 -3.3 1,619,885 + OH686_07925 0.67 -1.9 1,619,885 + OH686_07925 0.67 -2.7 1,619,885 + OH686_07925 0.67 -3.2 1,619,900 + OH686_07925 0.68 -3.3 1,620,005 + OH686_07925 0.74 -2.5 1,620,005 + OH686_07925 0.74 -0.8 1,620,005 + OH686_07925 0.74 -0.6 1,620,005 + OH686_07925 0.74 -2.6 1,620,005 + OH686_07925 0.74 -1.8 1,620,005 + OH686_07925 0.74 -2.1 1,620,005 + OH686_07925 0.74 -2.3 1,620,005 + OH686_07925 0.74 -2.3 1,620,005 + OH686_07925 0.74 -1.9 1,620,119 + OH686_07925 0.81 -2.6 1,620,119 + OH686_07925 0.81 -1.7 1,620,214 + OH686_07925 0.86 -1.7 1,620,233 + OH686_07925 0.87 -2.6 1,620,233 + OH686_07925 0.87 -0.1 1,620,233 + OH686_07925 0.87 -0.5 1,620,233 + OH686_07925 0.87 -2.4 1,620,233 + OH686_07925 0.87 -1.3 1,620,233 + OH686_07925 0.87 -0.6 1,620,234 - OH686_07925 0.87 -2.3 1,620,234 - OH686_07925 0.87 +0.1 1,620,234 - OH686_07925 0.87 -1.7 1,621,067 + -0.2 1,621,067 + -0.2 1,621,068 - -0.4 1,621,068 - +0.3 1,621,144 + +1.0 1,621,144 + +0.4 1,621,144 + -1.0
Or see this region's nucleotide sequence