Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_07580 and OH686_07585 are separated by 122 nucleotides OH686_07585 and OH686_07590 are separated by 25 nucleotides OH686_07590 and OH686_07595 are separated by 17 nucleotides
OH686_07580: OH686_07580 - Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase , at 1,547,317 to 1,549,116
_07580
OH686_07585: OH686_07585 - 3-dehydroquinate dehydratase, type II, at 1,549,239 to 1,549,682
_07585
OH686_07590: OH686_07590 - acetyl-CoA carboxylase, biotin carboxyl carrier protein, at 1,549,708 to 1,550,169
_07590
OH686_07595: OH686_07595 - acetyl-CoA carboxylase, biotin carboxylase subunit, at 1,550,187 to 1,551,539
_07595
Position (kb)
1549
1550 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1549.125 kb on + strand at 1549.160 kb on - strand at 1549.197 kb on + strand at 1549.306 kb on - strand, within OH686_07585 at 1549.313 kb on + strand, within OH686_07585 at 1549.313 kb on + strand, within OH686_07585 at 1549.316 kb on + strand, within OH686_07585 at 1549.316 kb on + strand, within OH686_07585 at 1549.316 kb on + strand, within OH686_07585 at 1549.316 kb on + strand, within OH686_07585 at 1549.317 kb on - strand, within OH686_07585 at 1549.380 kb on + strand, within OH686_07585 at 1549.380 kb on + strand, within OH686_07585 at 1549.380 kb on + strand, within OH686_07585 at 1549.380 kb on + strand, within OH686_07585 at 1549.381 kb on - strand, within OH686_07585 at 1549.381 kb on - strand, within OH686_07585 at 1549.420 kb on + strand, within OH686_07585 at 1549.420 kb on + strand, within OH686_07585 at 1549.420 kb on + strand, within OH686_07585 at 1549.421 kb on - strand, within OH686_07585 at 1549.421 kb on - strand, within OH686_07585 at 1549.421 kb on - strand, within OH686_07585 at 1549.421 kb on - strand, within OH686_07585 at 1549.495 kb on + strand, within OH686_07585 at 1549.495 kb on + strand, within OH686_07585 at 1549.495 kb on + strand, within OH686_07585 at 1549.495 kb on + strand, within OH686_07585 at 1549.496 kb on - strand, within OH686_07585 at 1549.584 kb on + strand, within OH686_07585 at 1549.584 kb on + strand, within OH686_07585 at 1549.597 kb on + strand, within OH686_07585 at 1549.669 kb on + strand at 1549.669 kb on + strand at 1549.669 kb on + strand at 1549.669 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 1,549,125 + -0.3 1,549,160 - -0.2 1,549,197 + -0.5 1,549,306 - OH686_07585 0.15 -1.3 1,549,313 + OH686_07585 0.17 -2.0 1,549,313 + OH686_07585 0.17 -0.3 1,549,316 + OH686_07585 0.17 -1.9 1,549,316 + OH686_07585 0.17 -0.9 1,549,316 + OH686_07585 0.17 -3.0 1,549,316 + OH686_07585 0.17 -4.1 1,549,317 - OH686_07585 0.18 -2.6 1,549,380 + OH686_07585 0.32 -1.3 1,549,380 + OH686_07585 0.32 -2.0 1,549,380 + OH686_07585 0.32 -2.2 1,549,380 + OH686_07585 0.32 -2.0 1,549,381 - OH686_07585 0.32 -3.3 1,549,381 - OH686_07585 0.32 -1.9 1,549,420 + OH686_07585 0.41 -0.3 1,549,420 + OH686_07585 0.41 -3.1 1,549,420 + OH686_07585 0.41 -2.2 1,549,421 - OH686_07585 0.41 -0.3 1,549,421 - OH686_07585 0.41 -1.5 1,549,421 - OH686_07585 0.41 -0.3 1,549,421 - OH686_07585 0.41 -2.7 1,549,495 + OH686_07585 0.58 -2.2 1,549,495 + OH686_07585 0.58 -2.5 1,549,495 + OH686_07585 0.58 -0.1 1,549,495 + OH686_07585 0.58 -1.1 1,549,496 - OH686_07585 0.58 -2.0 1,549,584 + OH686_07585 0.78 -0.6 1,549,584 + OH686_07585 0.78 -1.1 1,549,597 + OH686_07585 0.81 -1.9 1,549,669 + -0.3 1,549,669 + -0.7 1,549,669 + +0.3 1,549,669 + +0.6
Or see this region's nucleotide sequence