Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_04700 and OH686_04705 are separated by 125 nucleotides OH686_04705 and OH686_04710 are separated by 75 nucleotides
OH686_04700: OH686_04700 - hypothetical protein, at 970,841 to 971,932
_04700
OH686_04705: OH686_04705 - hypothetical protein, at 972,058 to 972,732
_04705
OH686_04710: OH686_04710 - glyceraldehyde-3-phosphate dehydrogenase, type I, at 972,808 to 973,845
_04710
Position (kb) 972
973 Strain fitness (log2 ratio) -2
-1
0
1
2 at 971.338 kb on - strand, within OH686_04700 at 971.338 kb on - strand, within OH686_04700 at 971.414 kb on + strand, within OH686_04700 at 971.414 kb on + strand, within OH686_04700 at 971.414 kb on + strand, within OH686_04700 at 971.415 kb on - strand, within OH686_04700 at 971.415 kb on - strand, within OH686_04700 at 971.415 kb on - strand, within OH686_04700 at 971.415 kb on - strand, within OH686_04700 at 971.415 kb on - strand, within OH686_04700 at 971.415 kb on - strand, within OH686_04700 at 971.481 kb on + strand, within OH686_04700 at 971.481 kb on + strand, within OH686_04700 at 971.481 kb on + strand, within OH686_04700 at 971.481 kb on + strand, within OH686_04700 at 971.481 kb on + strand, within OH686_04700 at 971.481 kb on + strand, within OH686_04700 at 971.481 kb on + strand, within OH686_04700 at 971.481 kb on + strand, within OH686_04700 at 971.482 kb on - strand, within OH686_04700 at 971.482 kb on - strand, within OH686_04700 at 971.482 kb on - strand, within OH686_04700 at 971.482 kb on - strand, within OH686_04700 at 971.482 kb on - strand, within OH686_04700 at 971.482 kb on - strand, within OH686_04700 at 971.482 kb on - strand, within OH686_04700 at 971.482 kb on - strand, within OH686_04700 at 971.482 kb on - strand, within OH686_04700 at 971.482 kb on - strand, within OH686_04700 at 971.482 kb on - strand, within OH686_04700 at 971.482 kb on - strand, within OH686_04700 at 971.482 kb on - strand, within OH686_04700 at 971.482 kb on - strand, within OH686_04700 at 971.482 kb on - strand, within OH686_04700 at 971.482 kb on - strand, within OH686_04700 at 971.482 kb on - strand, within OH686_04700 at 971.482 kb on - strand, within OH686_04700 at 971.719 kb on + strand, within OH686_04700 at 971.719 kb on + strand, within OH686_04700 at 971.720 kb on - strand, within OH686_04700 at 971.720 kb on - strand, within OH686_04700 at 971.721 kb on + strand, within OH686_04700 at 971.721 kb on + strand, within OH686_04700 at 971.721 kb on + strand, within OH686_04700 at 971.721 kb on + strand, within OH686_04700 at 971.721 kb on + strand, within OH686_04700 at 971.721 kb on + strand, within OH686_04700 at 971.722 kb on - strand, within OH686_04700 at 971.722 kb on - strand, within OH686_04700 at 971.722 kb on - strand, within OH686_04700 at 971.722 kb on - strand, within OH686_04700 at 971.722 kb on - strand, within OH686_04700 at 971.722 kb on - strand, within OH686_04700 at 971.722 kb on - strand, within OH686_04700 at 971.722 kb on - strand, within OH686_04700 at 971.880 kb on + strand at 971.880 kb on + strand at 971.880 kb on + strand at 971.880 kb on + strand at 971.880 kb on + strand at 971.881 kb on - strand at 971.881 kb on - strand at 971.881 kb on - strand at 971.881 kb on - strand at 971.881 kb on - strand at 971.881 kb on - strand at 971.881 kb on - strand at 971.881 kb on - strand at 971.881 kb on - strand at 971.920 kb on + strand at 971.920 kb on + strand at 971.920 kb on + strand at 971.920 kb on + strand at 971.920 kb on + strand at 971.920 kb on + strand at 971.920 kb on + strand at 971.920 kb on + strand at 971.920 kb on + strand at 971.920 kb on + strand at 971.920 kb on + strand at 971.921 kb on - strand at 971.921 kb on - strand at 971.921 kb on - strand at 971.921 kb on - strand at 971.921 kb on - strand at 971.976 kb on + strand at 971.976 kb on + strand at 971.977 kb on - strand at 971.977 kb on - strand at 971.978 kb on + strand at 971.978 kb on + strand at 971.978 kb on + strand at 971.978 kb on + strand at 971.978 kb on + strand at 971.978 kb on + strand at 971.978 kb on + strand at 971.979 kb on - strand at 971.979 kb on - strand at 971.979 kb on - strand at 971.979 kb on - strand at 971.979 kb on - strand at 971.979 kb on - strand at 972.026 kb on + strand at 972.027 kb on - strand at 972.130 kb on + strand, within OH686_04705 at 972.130 kb on + strand, within OH686_04705 at 972.131 kb on - strand, within OH686_04705 at 972.131 kb on - strand, within OH686_04705 at 972.131 kb on - strand, within OH686_04705 at 972.383 kb on - strand, within OH686_04705 at 972.383 kb on - strand, within OH686_04705 at 972.772 kb on + strand at 972.772 kb on + strand at 972.772 kb on + strand at 972.773 kb on - strand at 972.773 kb on - strand at 972.816 kb on + strand at 972.816 kb on + strand at 972.816 kb on + strand at 972.816 kb on + strand at 972.816 kb on + strand at 972.817 kb on - strand at 972.817 kb on - strand at 973.113 kb on + strand, within OH686_04710 at 973.114 kb on - strand, within OH686_04710 at 973.348 kb on + strand, within OH686_04710 at 973.348 kb on + strand, within OH686_04710 at 973.348 kb on + strand, within OH686_04710 at 973.348 kb on + strand, within OH686_04710 at 973.349 kb on - strand, within OH686_04710 at 973.349 kb on - strand, within OH686_04710 at 973.349 kb on - strand, within OH686_04710 at 973.349 kb on - strand, within OH686_04710 at 973.349 kb on - strand, within OH686_04710 at 973.663 kb on - strand, within OH686_04710
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 971,338 - OH686_04700 0.46 -0.5 971,338 - OH686_04700 0.46 -0.1 971,414 + OH686_04700 0.52 +0.7 971,414 + OH686_04700 0.52 +0.4 971,414 + OH686_04700 0.52 +0.2 971,415 - OH686_04700 0.53 -0.1 971,415 - OH686_04700 0.53 +0.7 971,415 - OH686_04700 0.53 +0.4 971,415 - OH686_04700 0.53 -1.1 971,415 - OH686_04700 0.53 +0.2 971,415 - OH686_04700 0.53 -0.5 971,481 + OH686_04700 0.59 -0.2 971,481 + OH686_04700 0.59 -2.3 971,481 + OH686_04700 0.59 -0.1 971,481 + OH686_04700 0.59 +0.6 971,481 + OH686_04700 0.59 -0.8 971,481 + OH686_04700 0.59 -0.3 971,481 + OH686_04700 0.59 -0.3 971,481 + OH686_04700 0.59 -0.1 971,482 - OH686_04700 0.59 +0.3 971,482 - OH686_04700 0.59 -1.2 971,482 - OH686_04700 0.59 +0.4 971,482 - OH686_04700 0.59 -0.4 971,482 - OH686_04700 0.59 +0.2 971,482 - OH686_04700 0.59 +0.2 971,482 - OH686_04700 0.59 +0.7 971,482 - OH686_04700 0.59 +0.0 971,482 - OH686_04700 0.59 -0.2 971,482 - OH686_04700 0.59 +0.5 971,482 - OH686_04700 0.59 +0.1 971,482 - OH686_04700 0.59 -1.1 971,482 - OH686_04700 0.59 +0.6 971,482 - OH686_04700 0.59 -0.3 971,482 - OH686_04700 0.59 -0.1 971,482 - OH686_04700 0.59 +0.5 971,482 - OH686_04700 0.59 -0.0 971,482 - OH686_04700 0.59 -0.3 971,719 + OH686_04700 0.80 +0.7 971,719 + OH686_04700 0.80 +0.9 971,720 - OH686_04700 0.80 +0.6 971,720 - OH686_04700 0.80 -0.4 971,721 + OH686_04700 0.81 -0.2 971,721 + OH686_04700 0.81 +0.4 971,721 + OH686_04700 0.81 +0.4 971,721 + OH686_04700 0.81 +2.0 971,721 + OH686_04700 0.81 -0.3 971,721 + OH686_04700 0.81 +1.0 971,722 - OH686_04700 0.81 -0.3 971,722 - OH686_04700 0.81 -0.4 971,722 - OH686_04700 0.81 +0.6 971,722 - OH686_04700 0.81 +0.2 971,722 - OH686_04700 0.81 -0.8 971,722 - OH686_04700 0.81 -0.2 971,722 - OH686_04700 0.81 -0.3 971,722 - OH686_04700 0.81 -0.1 971,880 + +1.1 971,880 + +1.0 971,880 + +0.4 971,880 + +0.2 971,880 + -1.4 971,881 - -1.7 971,881 - -1.5 971,881 - -0.1 971,881 - -1.6 971,881 - +0.8 971,881 - +1.9 971,881 - -1.0 971,881 - -0.1 971,881 - +0.6 971,920 + +0.4 971,920 + +0.1 971,920 + +0.4 971,920 + -0.4 971,920 + -0.3 971,920 + +1.1 971,920 + +0.6 971,920 + +0.9 971,920 + +0.4 971,920 + -1.4 971,920 + +0.7 971,921 - +0.4 971,921 - +0.3 971,921 - -0.1 971,921 - +0.3 971,921 - -2.3 971,976 + +1.2 971,976 + -0.4 971,977 - -0.3 971,977 - +0.0 971,978 + +0.0 971,978 + +0.6 971,978 + +0.4 971,978 + +0.8 971,978 + -0.5 971,978 + -0.8 971,978 + -0.4 971,979 - -0.1 971,979 - +0.1 971,979 - -0.4 971,979 - -0.5 971,979 - +0.4 971,979 - +0.2 972,026 + +0.5 972,027 - -0.5 972,130 + OH686_04705 0.11 +0.5 972,130 + OH686_04705 0.11 +0.9 972,131 - OH686_04705 0.11 +0.0 972,131 - OH686_04705 0.11 +0.9 972,131 - OH686_04705 0.11 +0.8 972,383 - OH686_04705 0.48 -0.2 972,383 - OH686_04705 0.48 +0.5 972,772 + -2.0 972,772 + +0.2 972,772 + -0.3 972,773 - +0.3 972,773 - -1.4 972,816 + -0.8 972,816 + +1.1 972,816 + -0.4 972,816 + +0.9 972,816 + -0.1 972,817 - +0.6 972,817 - -0.5 973,113 + OH686_04710 0.29 -0.5 973,114 - OH686_04710 0.29 -0.4 973,348 + OH686_04710 0.52 -0.3 973,348 + OH686_04710 0.52 +0.2 973,348 + OH686_04710 0.52 +0.3 973,348 + OH686_04710 0.52 +0.1 973,349 - OH686_04710 0.52 +0.7 973,349 - OH686_04710 0.52 -1.0 973,349 - OH686_04710 0.52 +0.9 973,349 - OH686_04710 0.52 -1.2 973,349 - OH686_04710 0.52 +0.2 973,663 - OH686_04710 0.82 +0.3
Or see this region's nucleotide sequence