Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_03745 and OH686_03750 are separated by 192 nucleotides OH686_03750 and OH686_03755 are separated by 4 nucleotides OH686_03755 and OH686_03760 are separated by 102 nucleotides
OH686_03745: OH686_03745 - glutamine--tRNA ligase, at 776,424 to 778,091
_03745
OH686_03750: OH686_03750 - Peptidyl-prolyl cis-trans isomerase PpiB , at 778,284 to 778,778
_03750
OH686_03755: OH686_03755 - UDP-2,3-diacylglucosamine diphosphatase, at 778,783 to 779,505
_03755
OH686_03760: OH686_03760 - hypothetical protein, at 779,608 to 780,960
_03760
Position (kb) 778
779 Strain fitness (log2 ratio) -2
-1
0
1 at 778.101 kb on - strand at 778.101 kb on - strand at 778.101 kb on - strand at 778.101 kb on - strand at 778.149 kb on - strand at 778.172 kb on - strand at 778.172 kb on - strand at 778.228 kb on + strand at 778.228 kb on + strand at 778.371 kb on + strand, within OH686_03750 at 778.389 kb on + strand, within OH686_03750 at 778.389 kb on + strand, within OH686_03750 at 778.402 kb on + strand, within OH686_03750 at 778.402 kb on + strand, within OH686_03750 at 778.402 kb on + strand, within OH686_03750 at 778.403 kb on - strand, within OH686_03750 at 779.613 kb on + strand at 779.613 kb on + strand at 779.614 kb on - strand at 779.653 kb on + strand at 779.653 kb on + strand at 779.653 kb on + strand at 779.653 kb on + strand at 779.653 kb on + strand at 779.653 kb on + strand at 779.654 kb on - strand at 779.654 kb on - strand at 779.654 kb on - strand at 779.654 kb on - strand at 779.716 kb on + strand at 779.717 kb on - strand at 779.717 kb on - strand at 779.717 kb on - strand at 779.717 kb on - strand at 779.753 kb on + strand, within OH686_03760 at 779.753 kb on + strand, within OH686_03760 at 779.754 kb on - strand, within OH686_03760 at 779.754 kb on - strand, within OH686_03760 at 779.754 kb on - strand, within OH686_03760 at 779.754 kb on - strand, within OH686_03760
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 778,101 - +0.1 778,101 - +0.4 778,101 - -0.3 778,101 - -0.4 778,149 - -0.3 778,172 - +0.2 778,172 - +0.4 778,228 + -1.0 778,228 + +0.8 778,371 + OH686_03750 0.18 +1.2 778,389 + OH686_03750 0.21 +1.2 778,389 + OH686_03750 0.21 -0.1 778,402 + OH686_03750 0.24 +0.1 778,402 + OH686_03750 0.24 +0.2 778,402 + OH686_03750 0.24 +0.4 778,403 - OH686_03750 0.24 -0.8 779,613 + +0.8 779,613 + +0.5 779,614 - -0.4 779,653 + +0.5 779,653 + +0.3 779,653 + +0.6 779,653 + -0.1 779,653 + +1.0 779,653 + -0.1 779,654 - -0.1 779,654 - +0.7 779,654 - +0.0 779,654 - +0.3 779,716 + +0.6 779,717 - -0.4 779,717 - -2.3 779,717 - -0.3 779,717 - -0.2 779,753 + OH686_03760 0.11 -0.2 779,753 + OH686_03760 0.11 +0.0 779,754 - OH686_03760 0.11 +0.9 779,754 - OH686_03760 0.11 +0.2 779,754 - OH686_03760 0.11 +0.2 779,754 - OH686_03760 0.11 -0.2
Or see this region's nucleotide sequence