Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_03470 and OH686_03475 overlap by 17 nucleotides OH686_03475 and OH686_03480 are separated by 44 nucleotides OH686_03480 and OH686_03485 are separated by 107 nucleotides
OH686_03470: OH686_03470 - Sulfite reductase [NADPH] hemoprotein beta-component , at 715,541 to 717,199
_03470
OH686_03475: OH686_03475 - Oxidoreductase putative, at 717,183 to 717,680
_03475
OH686_03480: OH686_03480 - Transcriptional regulator, AcrR family, at 717,725 to 718,303
_03480
OH686_03485: OH686_03485 - hypothetical protein, at 718,411 to 718,848
_03485
Position (kb) 717
718 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 716.189 kb on - strand, within OH686_03470 at 716.189 kb on - strand, within OH686_03470 at 716.226 kb on - strand, within OH686_03470 at 716.247 kb on + strand, within OH686_03470 at 716.247 kb on + strand, within OH686_03470 at 716.248 kb on - strand, within OH686_03470 at 716.249 kb on + strand, within OH686_03470 at 716.249 kb on + strand, within OH686_03470 at 716.249 kb on + strand, within OH686_03470 at 716.249 kb on + strand, within OH686_03470 at 716.249 kb on + strand, within OH686_03470 at 716.249 kb on + strand, within OH686_03470 at 716.249 kb on + strand, within OH686_03470 at 716.249 kb on + strand, within OH686_03470 at 716.250 kb on - strand, within OH686_03470 at 716.250 kb on - strand, within OH686_03470 at 716.250 kb on - strand, within OH686_03470 at 716.250 kb on - strand, within OH686_03470 at 716.250 kb on - strand, within OH686_03470 at 716.250 kb on - strand, within OH686_03470 at 716.250 kb on - strand, within OH686_03470 at 716.250 kb on - strand, within OH686_03470 at 716.250 kb on - strand, within OH686_03470 at 716.250 kb on - strand, within OH686_03470 at 716.279 kb on + strand, within OH686_03470 at 716.279 kb on + strand, within OH686_03470 at 716.279 kb on + strand, within OH686_03470 at 716.279 kb on + strand, within OH686_03470 at 716.279 kb on + strand, within OH686_03470 at 716.279 kb on + strand, within OH686_03470 at 716.279 kb on + strand, within OH686_03470 at 716.279 kb on + strand, within OH686_03470 at 716.279 kb on + strand, within OH686_03470 at 716.279 kb on + strand, within OH686_03470 at 716.279 kb on + strand, within OH686_03470 at 716.279 kb on + strand, within OH686_03470 at 716.280 kb on - strand, within OH686_03470 at 716.280 kb on - strand, within OH686_03470 at 716.280 kb on - strand, within OH686_03470 at 716.280 kb on - strand, within OH686_03470 at 716.280 kb on - strand, within OH686_03470 at 716.432 kb on + strand, within OH686_03470 at 716.540 kb on + strand, within OH686_03470 at 716.540 kb on + strand, within OH686_03470 at 716.540 kb on + strand, within OH686_03470 at 716.540 kb on + strand, within OH686_03470 at 716.540 kb on + strand, within OH686_03470 at 716.541 kb on - strand, within OH686_03470 at 716.541 kb on - strand, within OH686_03470 at 716.541 kb on - strand, within OH686_03470 at 716.541 kb on - strand, within OH686_03470 at 716.541 kb on - strand, within OH686_03470 at 716.636 kb on + strand, within OH686_03470 at 716.636 kb on + strand, within OH686_03470 at 716.870 kb on + strand, within OH686_03470 at 716.870 kb on + strand, within OH686_03470 at 716.870 kb on + strand, within OH686_03470 at 716.870 kb on + strand, within OH686_03470 at 716.870 kb on + strand, within OH686_03470 at 716.871 kb on - strand, within OH686_03470 at 716.871 kb on - strand, within OH686_03470 at 716.898 kb on + strand, within OH686_03470 at 716.898 kb on + strand, within OH686_03470 at 716.898 kb on + strand, within OH686_03470 at 716.898 kb on + strand, within OH686_03470 at 716.899 kb on - strand, within OH686_03470 at 716.899 kb on - strand, within OH686_03470 at 716.899 kb on - strand, within OH686_03470 at 716.899 kb on - strand, within OH686_03470 at 716.987 kb on + strand, within OH686_03470 at 716.987 kb on + strand, within OH686_03470 at 716.987 kb on + strand, within OH686_03470 at 716.987 kb on + strand, within OH686_03470 at 716.987 kb on + strand, within OH686_03470 at 716.987 kb on + strand, within OH686_03470 at 716.988 kb on - strand, within OH686_03470 at 716.988 kb on - strand, within OH686_03470 at 716.988 kb on - strand, within OH686_03470 at 716.988 kb on - strand, within OH686_03470 at 716.988 kb on - strand, within OH686_03470 at 717.078 kb on + strand at 717.078 kb on + strand at 717.079 kb on - strand at 717.079 kb on - strand at 717.079 kb on - strand at 717.101 kb on + strand at 717.101 kb on + strand at 717.101 kb on + strand at 717.101 kb on + strand at 717.101 kb on + strand at 717.101 kb on + strand at 717.101 kb on + strand at 717.101 kb on + strand at 717.101 kb on + strand at 717.101 kb on + strand at 717.101 kb on + strand at 717.102 kb on - strand at 717.102 kb on - strand at 717.102 kb on - strand at 717.102 kb on - strand at 717.102 kb on - strand at 717.102 kb on - strand at 717.102 kb on - strand at 717.102 kb on - strand at 717.102 kb on - strand at 717.182 kb on + strand at 717.183 kb on - strand at 717.183 kb on - strand at 717.197 kb on + strand at 717.198 kb on - strand at 717.198 kb on - strand at 717.349 kb on + strand, within OH686_03475 at 717.462 kb on + strand, within OH686_03475 at 717.462 kb on + strand, within OH686_03475 at 717.486 kb on + strand, within OH686_03475 at 717.487 kb on - strand, within OH686_03475 at 717.499 kb on + strand, within OH686_03475 at 717.499 kb on + strand, within OH686_03475 at 717.499 kb on + strand, within OH686_03475 at 717.500 kb on - strand, within OH686_03475 at 717.500 kb on - strand, within OH686_03475 at 717.540 kb on + strand, within OH686_03475 at 717.541 kb on - strand, within OH686_03475 at 717.630 kb on + strand, within OH686_03475 at 717.630 kb on + strand, within OH686_03475 at 717.631 kb on - strand at 717.631 kb on - strand at 717.631 kb on - strand at 717.761 kb on + strand at 717.761 kb on + strand at 717.761 kb on + strand at 717.761 kb on + strand at 717.762 kb on - strand at 717.762 kb on - strand at 717.762 kb on - strand at 717.811 kb on + strand, within OH686_03480 at 718.018 kb on + strand, within OH686_03480 at 718.038 kb on + strand, within OH686_03480 at 718.038 kb on + strand, within OH686_03480 at 718.038 kb on + strand, within OH686_03480 at 718.038 kb on + strand, within OH686_03480 at 718.038 kb on + strand, within OH686_03480 at 718.038 kb on + strand, within OH686_03480 at 718.038 kb on + strand, within OH686_03480 at 718.039 kb on - strand, within OH686_03480 at 718.039 kb on - strand, within OH686_03480 at 718.039 kb on - strand, within OH686_03480 at 718.039 kb on - strand, within OH686_03480 at 718.039 kb on - strand, within OH686_03480 at 718.039 kb on - strand, within OH686_03480 at 718.114 kb on - strand, within OH686_03480 at 718.134 kb on + strand, within OH686_03480 at 718.134 kb on + strand, within OH686_03480 at 718.134 kb on + strand, within OH686_03480 at 718.134 kb on + strand, within OH686_03480 at 718.159 kb on + strand, within OH686_03480 at 718.159 kb on + strand, within OH686_03480 at 718.159 kb on + strand, within OH686_03480 at 718.160 kb on - strand, within OH686_03480 at 718.160 kb on - strand, within OH686_03480 at 718.160 kb on - strand, within OH686_03480 at 718.160 kb on - strand, within OH686_03480 at 718.177 kb on - strand, within OH686_03480 at 718.177 kb on - strand, within OH686_03480 at 718.177 kb on - strand, within OH686_03480 at 718.177 kb on - strand, within OH686_03480 at 718.323 kb on - strand at 718.357 kb on + strand at 718.357 kb on + strand at 718.357 kb on + strand at 718.358 kb on - strand at 718.358 kb on - strand at 718.358 kb on - strand at 718.358 kb on - strand at 718.358 kb on - strand at 718.359 kb on + strand at 718.359 kb on + strand at 718.359 kb on + strand at 718.359 kb on + strand at 718.359 kb on + strand at 718.359 kb on + strand at 718.360 kb on - strand at 718.360 kb on - strand at 718.432 kb on + strand at 718.432 kb on + strand at 718.432 kb on + strand at 718.432 kb on + strand at 718.432 kb on + strand at 718.432 kb on + strand at 718.432 kb on + strand at 718.432 kb on + strand at 718.432 kb on + strand at 718.432 kb on + strand at 718.432 kb on + strand at 718.432 kb on + strand at 718.432 kb on + strand at 718.433 kb on - strand at 718.433 kb on - strand at 718.433 kb on - strand at 718.433 kb on - strand at 718.433 kb on - strand at 718.433 kb on - strand at 718.433 kb on - strand at 718.433 kb on - strand at 718.433 kb on - strand at 718.433 kb on - strand at 718.433 kb on - strand at 718.433 kb on - strand at 718.486 kb on + strand, within OH686_03485 at 718.487 kb on - strand, within OH686_03485 at 718.487 kb on - strand, within OH686_03485 at 718.487 kb on - strand, within OH686_03485
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 716,189 - OH686_03470 0.39 -0.4 716,189 - OH686_03470 0.39 -1.8 716,226 - OH686_03470 0.41 +0.2 716,247 + OH686_03470 0.43 -2.3 716,247 + OH686_03470 0.43 -1.3 716,248 - OH686_03470 0.43 +0.2 716,249 + OH686_03470 0.43 -1.8 716,249 + OH686_03470 0.43 +0.4 716,249 + OH686_03470 0.43 -1.4 716,249 + OH686_03470 0.43 +0.2 716,249 + OH686_03470 0.43 -1.4 716,249 + OH686_03470 0.43 -0.6 716,249 + OH686_03470 0.43 +0.5 716,249 + OH686_03470 0.43 -1.7 716,250 - OH686_03470 0.43 -0.8 716,250 - OH686_03470 0.43 -0.8 716,250 - OH686_03470 0.43 -1.2 716,250 - OH686_03470 0.43 -1.3 716,250 - OH686_03470 0.43 +0.7 716,250 - OH686_03470 0.43 -1.6 716,250 - OH686_03470 0.43 -1.4 716,250 - OH686_03470 0.43 -0.6 716,250 - OH686_03470 0.43 +0.3 716,250 - OH686_03470 0.43 -0.8 716,279 + OH686_03470 0.44 -1.1 716,279 + OH686_03470 0.44 -0.3 716,279 + OH686_03470 0.44 -0.1 716,279 + OH686_03470 0.44 -1.5 716,279 + OH686_03470 0.44 +1.1 716,279 + OH686_03470 0.44 -0.3 716,279 + OH686_03470 0.44 -2.7 716,279 + OH686_03470 0.44 -1.4 716,279 + OH686_03470 0.44 -2.3 716,279 + OH686_03470 0.44 -1.4 716,279 + OH686_03470 0.44 -1.9 716,279 + OH686_03470 0.44 -2.1 716,280 - OH686_03470 0.45 -1.1 716,280 - OH686_03470 0.45 -1.8 716,280 - OH686_03470 0.45 -0.7 716,280 - OH686_03470 0.45 -1.8 716,280 - OH686_03470 0.45 -2.5 716,432 + OH686_03470 0.54 -0.4 716,540 + OH686_03470 0.60 -0.3 716,540 + OH686_03470 0.60 -1.1 716,540 + OH686_03470 0.60 -0.7 716,540 + OH686_03470 0.60 -0.7 716,540 + OH686_03470 0.60 -0.4 716,541 - OH686_03470 0.60 -1.8 716,541 - OH686_03470 0.60 -0.6 716,541 - OH686_03470 0.60 -0.7 716,541 - OH686_03470 0.60 -1.0 716,541 - OH686_03470 0.60 -1.0 716,636 + OH686_03470 0.66 -1.3 716,636 + OH686_03470 0.66 +1.3 716,870 + OH686_03470 0.80 -1.2 716,870 + OH686_03470 0.80 -1.6 716,870 + OH686_03470 0.80 -1.3 716,870 + OH686_03470 0.80 -1.5 716,870 + OH686_03470 0.80 +0.4 716,871 - OH686_03470 0.80 -0.3 716,871 - OH686_03470 0.80 -0.3 716,898 + OH686_03470 0.82 -3.2 716,898 + OH686_03470 0.82 -0.4 716,898 + OH686_03470 0.82 -0.6 716,898 + OH686_03470 0.82 -2.2 716,899 - OH686_03470 0.82 -1.8 716,899 - OH686_03470 0.82 -1.7 716,899 - OH686_03470 0.82 -0.4 716,899 - OH686_03470 0.82 -1.6 716,987 + OH686_03470 0.87 -0.8 716,987 + OH686_03470 0.87 -0.4 716,987 + OH686_03470 0.87 -3.7 716,987 + OH686_03470 0.87 -1.4 716,987 + OH686_03470 0.87 -0.6 716,987 + OH686_03470 0.87 -0.8 716,988 - OH686_03470 0.87 -0.3 716,988 - OH686_03470 0.87 -0.5 716,988 - OH686_03470 0.87 -0.1 716,988 - OH686_03470 0.87 -1.3 716,988 - OH686_03470 0.87 +0.4 717,078 + -1.1 717,078 + -1.2 717,079 - -0.3 717,079 - -1.7 717,079 - -0.4 717,101 + -2.1 717,101 + -1.3 717,101 + -0.1 717,101 + -3.2 717,101 + -1.3 717,101 + -1.3 717,101 + -1.0 717,101 + -0.7 717,101 + -3.0 717,101 + -0.8 717,101 + -1.1 717,102 - +1.0 717,102 - -2.5 717,102 - -0.8 717,102 - -1.2 717,102 - -0.6 717,102 - -0.3 717,102 - -1.1 717,102 - -2.0 717,102 - -3.0 717,182 + +0.4 717,183 - -0.3 717,183 - +0.2 717,197 + -2.6 717,198 - -1.3 717,198 - -1.8 717,349 + OH686_03475 0.33 -1.6 717,462 + OH686_03475 0.56 +0.6 717,462 + OH686_03475 0.56 -0.6 717,486 + OH686_03475 0.61 -2.8 717,487 - OH686_03475 0.61 -1.8 717,499 + OH686_03475 0.63 -0.3 717,499 + OH686_03475 0.63 -2.8 717,499 + OH686_03475 0.63 -0.9 717,500 - OH686_03475 0.64 -0.9 717,500 - OH686_03475 0.64 -1.3 717,540 + OH686_03475 0.72 -2.7 717,541 - OH686_03475 0.72 -0.9 717,630 + OH686_03475 0.90 -0.6 717,630 + OH686_03475 0.90 -1.4 717,631 - -1.6 717,631 - -1.8 717,631 - -0.5 717,761 + -0.3 717,761 + -0.1 717,761 + -1.1 717,761 + +0.6 717,762 - -1.0 717,762 - -2.0 717,762 - -1.1 717,811 + OH686_03480 0.15 -1.3 718,018 + OH686_03480 0.51 -0.5 718,038 + OH686_03480 0.54 -2.1 718,038 + OH686_03480 0.54 -1.8 718,038 + OH686_03480 0.54 +0.3 718,038 + OH686_03480 0.54 -1.1 718,038 + OH686_03480 0.54 -0.1 718,038 + OH686_03480 0.54 -2.0 718,038 + OH686_03480 0.54 -1.0 718,039 - OH686_03480 0.54 +0.6 718,039 - OH686_03480 0.54 +1.2 718,039 - OH686_03480 0.54 +0.3 718,039 - OH686_03480 0.54 +1.5 718,039 - OH686_03480 0.54 -1.6 718,039 - OH686_03480 0.54 -1.0 718,114 - OH686_03480 0.67 -0.2 718,134 + OH686_03480 0.71 -1.2 718,134 + OH686_03480 0.71 +1.2 718,134 + OH686_03480 0.71 -0.5 718,134 + OH686_03480 0.71 -0.0 718,159 + OH686_03480 0.75 -0.4 718,159 + OH686_03480 0.75 +1.1 718,159 + OH686_03480 0.75 -2.0 718,160 - OH686_03480 0.75 +0.5 718,160 - OH686_03480 0.75 +0.3 718,160 - OH686_03480 0.75 +0.7 718,160 - OH686_03480 0.75 +1.3 718,177 - OH686_03480 0.78 -0.8 718,177 - OH686_03480 0.78 +0.3 718,177 - OH686_03480 0.78 -0.8 718,177 - OH686_03480 0.78 -1.4 718,323 - -0.6 718,357 + -1.1 718,357 + +0.5 718,357 + -2.7 718,358 - -0.7 718,358 - -0.2 718,358 - +0.3 718,358 - -2.0 718,358 - -0.3 718,359 + +1.7 718,359 + -0.3 718,359 + -0.4 718,359 + +0.6 718,359 + -0.6 718,359 + +0.2 718,360 - +0.8 718,360 - +0.6 718,432 + -0.8 718,432 + -0.1 718,432 + +0.1 718,432 + +0.4 718,432 + -0.8 718,432 + -0.1 718,432 + +0.3 718,432 + +0.4 718,432 + +0.5 718,432 + -0.2 718,432 + +0.0 718,432 + -0.2 718,432 + +0.4 718,433 - -0.4 718,433 - -0.8 718,433 - +0.0 718,433 - +0.7 718,433 - -0.3 718,433 - +0.1 718,433 - +0.5 718,433 - -0.7 718,433 - -0.5 718,433 - -0.1 718,433 - -0.9 718,433 - +0.6 718,486 + OH686_03485 0.17 +0.5 718,487 - OH686_03485 0.17 +0.6 718,487 - OH686_03485 0.17 -0.1 718,487 - OH686_03485 0.17 +0.6
Or see this region's nucleotide sequence