Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_03215 and OH686_03220 are separated by 118 nucleotides OH686_03220 and OH686_03225 are separated by 236 nucleotides OH686_03225 and OH686_03230 are separated by 131 nucleotides OH686_03230 and OH686_03235 are separated by 10 nucleotides
OH686_03215: OH686_03215 - spermidine synthase, at 672,737 to 673,597
_03215
OH686_03220: OH686_03220 - hypothetical protein, at 673,716 to 673,898
_03220
OH686_03225: OH686_03225 - hypothetical protein, at 674,135 to 674,401
_03225
OH686_03230: OH686_03230 - hypothetical protein, at 674,533 to 674,817
_03230
OH686_03235: OH686_03235 - Putative inner membrane protein, at 674,828 to 675,520
_03235
Position (kb) 674
675 Strain fitness (log2 ratio) -2
-1
0
1
2 at 673.221 kb on + strand, within OH686_03215 at 673.221 kb on + strand, within OH686_03215 at 673.222 kb on - strand, within OH686_03215 at 673.222 kb on - strand, within OH686_03215 at 673.222 kb on - strand, within OH686_03215 at 673.261 kb on + strand, within OH686_03215 at 673.261 kb on + strand, within OH686_03215 at 673.261 kb on + strand, within OH686_03215 at 673.261 kb on + strand, within OH686_03215 at 673.262 kb on - strand, within OH686_03215 at 673.262 kb on - strand, within OH686_03215 at 673.262 kb on - strand, within OH686_03215 at 673.262 kb on - strand, within OH686_03215 at 673.262 kb on - strand, within OH686_03215 at 673.262 kb on - strand, within OH686_03215 at 673.262 kb on - strand, within OH686_03215 at 673.262 kb on - strand, within OH686_03215 at 673.262 kb on - strand, within OH686_03215 at 673.262 kb on - strand, within OH686_03215 at 673.419 kb on + strand, within OH686_03215 at 673.419 kb on + strand, within OH686_03215 at 673.419 kb on + strand, within OH686_03215 at 673.419 kb on + strand, within OH686_03215 at 673.419 kb on + strand, within OH686_03215 at 673.419 kb on + strand, within OH686_03215 at 673.420 kb on - strand, within OH686_03215 at 673.420 kb on - strand, within OH686_03215 at 673.420 kb on - strand, within OH686_03215 at 673.563 kb on + strand at 673.572 kb on + strand at 673.572 kb on + strand at 673.572 kb on + strand at 673.573 kb on - strand at 673.573 kb on - strand at 673.587 kb on + strand at 673.665 kb on + strand at 673.665 kb on + strand at 673.665 kb on + strand at 673.665 kb on + strand at 673.665 kb on + strand at 673.665 kb on + strand at 673.665 kb on + strand at 673.665 kb on + strand at 673.666 kb on - strand at 673.666 kb on - strand at 673.666 kb on - strand at 673.666 kb on - strand at 673.666 kb on - strand at 673.666 kb on - strand at 673.673 kb on + strand at 673.673 kb on + strand at 673.673 kb on + strand at 673.674 kb on - strand at 673.717 kb on + strand at 673.717 kb on + strand at 673.717 kb on + strand at 673.717 kb on + strand at 673.718 kb on - strand at 673.718 kb on - strand at 673.718 kb on - strand at 673.771 kb on - strand, within OH686_03220 at 673.856 kb on + strand, within OH686_03220 at 673.883 kb on + strand at 673.883 kb on + strand at 673.883 kb on + strand at 673.883 kb on + strand at 673.883 kb on + strand at 673.883 kb on + strand at 673.883 kb on + strand at 673.883 kb on + strand at 673.884 kb on - strand at 673.884 kb on - strand at 673.884 kb on - strand at 673.884 kb on - strand at 673.884 kb on - strand at 673.884 kb on - strand at 673.891 kb on + strand at 673.891 kb on + strand at 673.891 kb on + strand at 673.892 kb on - strand at 673.892 kb on - strand at 673.924 kb on + strand at 673.924 kb on + strand at 673.925 kb on - strand at 673.925 kb on - strand at 673.925 kb on - strand at 673.925 kb on - strand at 673.925 kb on - strand at 673.931 kb on + strand at 673.931 kb on + strand at 673.931 kb on + strand at 673.931 kb on + strand at 673.931 kb on + strand at 673.931 kb on + strand at 673.932 kb on - strand at 673.932 kb on - strand at 673.932 kb on - strand at 673.932 kb on - strand at 673.932 kb on - strand at 673.932 kb on - strand at 674.082 kb on + strand at 674.082 kb on + strand at 674.082 kb on + strand at 674.082 kb on + strand at 674.083 kb on - strand at 674.083 kb on - strand at 674.083 kb on - strand at 674.083 kb on - strand at 674.083 kb on - strand at 674.083 kb on - strand at 674.303 kb on + strand, within OH686_03225 at 674.303 kb on + strand, within OH686_03225 at 674.303 kb on + strand, within OH686_03225 at 674.303 kb on + strand, within OH686_03225 at 674.303 kb on + strand, within OH686_03225 at 674.303 kb on + strand, within OH686_03225 at 674.303 kb on + strand, within OH686_03225 at 674.304 kb on - strand, within OH686_03225 at 674.304 kb on - strand, within OH686_03225 at 674.304 kb on - strand, within OH686_03225 at 674.304 kb on - strand, within OH686_03225 at 674.304 kb on - strand, within OH686_03225 at 674.399 kb on + strand at 674.400 kb on - strand at 674.400 kb on - strand at 674.475 kb on - strand at 674.502 kb on - strand at 674.502 kb on - strand at 674.509 kb on - strand at 674.645 kb on + strand, within OH686_03230 at 674.646 kb on - strand, within OH686_03230 at 674.655 kb on + strand, within OH686_03230 at 674.656 kb on - strand, within OH686_03230 at 674.656 kb on - strand, within OH686_03230 at 674.702 kb on - strand, within OH686_03230 at 674.767 kb on + strand, within OH686_03230 at 674.768 kb on - strand, within OH686_03230 at 674.768 kb on - strand, within OH686_03230 at 674.893 kb on - strand at 675.032 kb on + strand, within OH686_03235 at 675.033 kb on - strand, within OH686_03235 at 675.033 kb on - strand, within OH686_03235 at 675.042 kb on + strand, within OH686_03235 at 675.042 kb on + strand, within OH686_03235 at 675.042 kb on + strand, within OH686_03235 at 675.043 kb on - strand, within OH686_03235 at 675.043 kb on - strand, within OH686_03235 at 675.043 kb on - strand, within OH686_03235 at 675.043 kb on - strand, within OH686_03235 at 675.089 kb on + strand, within OH686_03235 at 675.089 kb on + strand, within OH686_03235 at 675.089 kb on + strand, within OH686_03235 at 675.089 kb on + strand, within OH686_03235 at 675.090 kb on - strand, within OH686_03235 at 675.090 kb on - strand, within OH686_03235 at 675.090 kb on - strand, within OH686_03235 at 675.090 kb on - strand, within OH686_03235 at 675.179 kb on + strand, within OH686_03235 at 675.179 kb on + strand, within OH686_03235 at 675.179 kb on + strand, within OH686_03235 at 675.179 kb on + strand, within OH686_03235 at 675.179 kb on + strand, within OH686_03235 at 675.180 kb on - strand, within OH686_03235 at 675.252 kb on + strand, within OH686_03235 at 675.252 kb on + strand, within OH686_03235 at 675.253 kb on - strand, within OH686_03235 at 675.311 kb on + strand, within OH686_03235 at 675.312 kb on - strand, within OH686_03235 at 675.312 kb on - strand, within OH686_03235 at 675.377 kb on + strand, within OH686_03235 at 675.377 kb on + strand, within OH686_03235 at 675.377 kb on + strand, within OH686_03235 at 675.378 kb on - strand, within OH686_03235 at 675.378 kb on - strand, within OH686_03235
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 673,221 + OH686_03215 0.56 -0.3 673,221 + OH686_03215 0.56 -2.7 673,222 - OH686_03215 0.56 +1.0 673,222 - OH686_03215 0.56 +0.7 673,222 - OH686_03215 0.56 +0.2 673,261 + OH686_03215 0.61 -0.5 673,261 + OH686_03215 0.61 -0.1 673,261 + OH686_03215 0.61 +0.4 673,261 + OH686_03215 0.61 -1.0 673,262 - OH686_03215 0.61 -0.7 673,262 - OH686_03215 0.61 +0.1 673,262 - OH686_03215 0.61 +0.5 673,262 - OH686_03215 0.61 -1.6 673,262 - OH686_03215 0.61 +0.1 673,262 - OH686_03215 0.61 +0.4 673,262 - OH686_03215 0.61 -0.8 673,262 - OH686_03215 0.61 +0.7 673,262 - OH686_03215 0.61 -1.4 673,262 - OH686_03215 0.61 +1.5 673,419 + OH686_03215 0.79 -0.7 673,419 + OH686_03215 0.79 +0.3 673,419 + OH686_03215 0.79 -1.0 673,419 + OH686_03215 0.79 +0.3 673,419 + OH686_03215 0.79 +0.1 673,419 + OH686_03215 0.79 +0.9 673,420 - OH686_03215 0.79 -0.1 673,420 - OH686_03215 0.79 +1.2 673,420 - OH686_03215 0.79 -0.4 673,563 + -0.6 673,572 + +1.6 673,572 + +1.1 673,572 + +0.7 673,573 - -0.1 673,573 - -0.0 673,587 + +1.2 673,665 + -0.2 673,665 + +0.7 673,665 + -0.0 673,665 + +0.6 673,665 + +0.7 673,665 + -0.5 673,665 + +0.5 673,665 + +0.5 673,666 - +1.0 673,666 - -0.6 673,666 - +0.7 673,666 - +1.4 673,666 - +0.3 673,666 - -0.3 673,673 + +0.4 673,673 + -1.2 673,673 + -0.6 673,674 - -0.3 673,717 + -0.6 673,717 + -0.3 673,717 + +0.0 673,717 + -0.8 673,718 - -0.4 673,718 - -1.6 673,718 - -0.8 673,771 - OH686_03220 0.30 -0.2 673,856 + OH686_03220 0.77 -0.8 673,883 + -0.4 673,883 + -1.2 673,883 + -0.3 673,883 + -0.7 673,883 + +0.4 673,883 + +0.5 673,883 + +0.2 673,883 + -0.7 673,884 - +0.7 673,884 - +0.2 673,884 - +0.7 673,884 - -0.2 673,884 - -0.2 673,884 - -0.7 673,891 + -0.3 673,891 + -0.1 673,891 + +0.7 673,892 - -1.2 673,892 - -0.1 673,924 + -1.6 673,924 + -0.5 673,925 - +0.3 673,925 - -0.6 673,925 - +0.6 673,925 - -0.4 673,925 - +0.6 673,931 + -1.0 673,931 + -0.7 673,931 + +0.5 673,931 + -0.2 673,931 + +0.9 673,931 + -0.8 673,932 - +0.5 673,932 - +0.3 673,932 - +0.1 673,932 - +0.0 673,932 - -0.5 673,932 - +1.2 674,082 + +0.2 674,082 + +1.2 674,082 + +0.6 674,082 + +0.4 674,083 - -0.1 674,083 - +0.4 674,083 - -0.6 674,083 - +0.3 674,083 - +0.6 674,083 - +0.0 674,303 + OH686_03225 0.63 -0.3 674,303 + OH686_03225 0.63 +0.1 674,303 + OH686_03225 0.63 +0.2 674,303 + OH686_03225 0.63 -0.1 674,303 + OH686_03225 0.63 +0.7 674,303 + OH686_03225 0.63 +0.1 674,303 + OH686_03225 0.63 +0.7 674,304 - OH686_03225 0.63 +0.7 674,304 - OH686_03225 0.63 +0.3 674,304 - OH686_03225 0.63 +0.8 674,304 - OH686_03225 0.63 +0.2 674,304 - OH686_03225 0.63 +1.0 674,399 + -0.6 674,400 - -0.6 674,400 - -0.3 674,475 - -0.3 674,502 - -0.6 674,502 - -0.1 674,509 - -0.4 674,645 + OH686_03230 0.39 -0.3 674,646 - OH686_03230 0.40 +0.9 674,655 + OH686_03230 0.43 +0.4 674,656 - OH686_03230 0.43 -0.1 674,656 - OH686_03230 0.43 -0.0 674,702 - OH686_03230 0.59 -0.7 674,767 + OH686_03230 0.82 +0.7 674,768 - OH686_03230 0.82 -0.1 674,768 - OH686_03230 0.82 +0.5 674,893 - -0.0 675,032 + OH686_03235 0.29 -1.1 675,033 - OH686_03235 0.30 -0.7 675,033 - OH686_03235 0.30 -0.7 675,042 + OH686_03235 0.31 -0.1 675,042 + OH686_03235 0.31 +0.2 675,042 + OH686_03235 0.31 +0.3 675,043 - OH686_03235 0.31 -0.4 675,043 - OH686_03235 0.31 -0.5 675,043 - OH686_03235 0.31 -0.8 675,043 - OH686_03235 0.31 +0.2 675,089 + OH686_03235 0.38 +1.0 675,089 + OH686_03235 0.38 +0.0 675,089 + OH686_03235 0.38 -0.1 675,089 + OH686_03235 0.38 +0.0 675,090 - OH686_03235 0.38 -0.3 675,090 - OH686_03235 0.38 +0.4 675,090 - OH686_03235 0.38 -0.1 675,090 - OH686_03235 0.38 +0.2 675,179 + OH686_03235 0.51 -0.7 675,179 + OH686_03235 0.51 +0.3 675,179 + OH686_03235 0.51 +0.1 675,179 + OH686_03235 0.51 +2.1 675,179 + OH686_03235 0.51 -0.8 675,180 - OH686_03235 0.51 +0.3 675,252 + OH686_03235 0.61 +0.4 675,252 + OH686_03235 0.61 +0.5 675,253 - OH686_03235 0.61 -0.5 675,311 + OH686_03235 0.70 +0.3 675,312 - OH686_03235 0.70 +0.3 675,312 - OH686_03235 0.70 +0.7 675,377 + OH686_03235 0.79 +0.2 675,377 + OH686_03235 0.79 +0.2 675,377 + OH686_03235 0.79 -0.2 675,378 - OH686_03235 0.79 -0.3 675,378 - OH686_03235 0.79 +0.4
Or see this region's nucleotide sequence