Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_02820 and OH686_02825 overlap by 11 nucleotides OH686_02825 and OH686_02830 are separated by 3 nucleotides OH686_02830 and OH686_02835 overlap by 8 nucleotides
OH686_02820: OH686_02820 - flagellar protein export ATPase FliI, at 591,081 to 592,439
_02820
OH686_02825: OH686_02825 - Flagellar assembly protein FliH, at 592,429 to 593,211
_02825
OH686_02830: OH686_02830 - flagellar motor switch protein FliG, at 593,215 to 594,231
_02830
OH686_02835: OH686_02835 - flagellar M-ring protein FliF, at 594,224 to 596,020
_02835
Position (kb) 593
594
595 Strain fitness (log2 ratio) -1
0
1 at 592.261 kb on + strand, within OH686_02820 at 592.261 kb on + strand, within OH686_02820 at 592.261 kb on + strand, within OH686_02820 at 592.261 kb on + strand, within OH686_02820 at 592.261 kb on + strand, within OH686_02820 at 592.262 kb on - strand, within OH686_02820 at 592.262 kb on - strand, within OH686_02820 at 592.262 kb on - strand, within OH686_02820 at 592.262 kb on - strand, within OH686_02820 at 592.262 kb on - strand, within OH686_02820 at 592.680 kb on + strand, within OH686_02825 at 592.680 kb on + strand, within OH686_02825 at 592.680 kb on + strand, within OH686_02825 at 592.681 kb on - strand, within OH686_02825 at 592.982 kb on + strand, within OH686_02825 at 592.982 kb on + strand, within OH686_02825 at 592.983 kb on - strand, within OH686_02825 at 592.983 kb on - strand, within OH686_02825 at 592.983 kb on - strand, within OH686_02825 at 593.216 kb on + strand at 593.216 kb on + strand at 593.216 kb on + strand at 593.216 kb on + strand at 593.217 kb on - strand at 593.217 kb on - strand at 593.810 kb on + strand, within OH686_02830 at 593.810 kb on + strand, within OH686_02830 at 593.811 kb on - strand, within OH686_02830 at 593.811 kb on - strand, within OH686_02830 at 593.846 kb on + strand, within OH686_02830 at 593.985 kb on + strand, within OH686_02830 at 593.987 kb on + strand, within OH686_02830 at 593.987 kb on + strand, within OH686_02830 at 593.987 kb on + strand, within OH686_02830 at 593.987 kb on + strand, within OH686_02830 at 593.987 kb on + strand, within OH686_02830 at 593.987 kb on + strand, within OH686_02830 at 593.987 kb on + strand, within OH686_02830 at 593.987 kb on + strand, within OH686_02830 at 593.987 kb on + strand, within OH686_02830 at 593.987 kb on + strand, within OH686_02830 at 593.987 kb on + strand, within OH686_02830 at 593.987 kb on + strand, within OH686_02830 at 593.987 kb on + strand, within OH686_02830 at 593.988 kb on - strand, within OH686_02830 at 593.988 kb on - strand, within OH686_02830 at 593.988 kb on - strand, within OH686_02830 at 593.988 kb on - strand, within OH686_02830 at 593.988 kb on - strand, within OH686_02830 at 593.988 kb on - strand, within OH686_02830 at 593.988 kb on - strand, within OH686_02830 at 593.988 kb on - strand, within OH686_02830 at 593.988 kb on - strand, within OH686_02830 at 593.988 kb on - strand, within OH686_02830 at 594.254 kb on + strand at 594.254 kb on + strand at 594.255 kb on - strand at 594.318 kb on + strand at 594.319 kb on - strand at 594.319 kb on - strand at 594.536 kb on + strand, within OH686_02835 at 594.576 kb on + strand, within OH686_02835 at 594.577 kb on - strand, within OH686_02835 at 594.819 kb on + strand, within OH686_02835 at 594.819 kb on + strand, within OH686_02835 at 594.820 kb on - strand, within OH686_02835 at 594.820 kb on - strand, within OH686_02835 at 594.820 kb on - strand, within OH686_02835 at 594.820 kb on - strand, within OH686_02835 at 594.820 kb on - strand, within OH686_02835 at 594.820 kb on - strand, within OH686_02835 at 594.820 kb on - strand, within OH686_02835 at 595.063 kb on + strand, within OH686_02835 at 595.063 kb on + strand, within OH686_02835 at 595.063 kb on + strand, within OH686_02835 at 595.063 kb on + strand, within OH686_02835 at 595.063 kb on + strand, within OH686_02835 at 595.063 kb on + strand, within OH686_02835 at 595.063 kb on + strand, within OH686_02835 at 595.063 kb on + strand, within OH686_02835 at 595.063 kb on + strand, within OH686_02835 at 595.063 kb on + strand, within OH686_02835 at 595.064 kb on - strand, within OH686_02835 at 595.064 kb on - strand, within OH686_02835 at 595.064 kb on - strand, within OH686_02835 at 595.064 kb on - strand, within OH686_02835 at 595.185 kb on + strand, within OH686_02835 at 595.185 kb on + strand, within OH686_02835 at 595.186 kb on - strand, within OH686_02835 at 595.186 kb on - strand, within OH686_02835 at 595.186 kb on - strand, within OH686_02835
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 592,261 + OH686_02820 0.87 +0.4 592,261 + OH686_02820 0.87 +1.1 592,261 + OH686_02820 0.87 +0.9 592,261 + OH686_02820 0.87 -1.5 592,261 + OH686_02820 0.87 +0.2 592,262 - OH686_02820 0.87 +0.2 592,262 - OH686_02820 0.87 +0.6 592,262 - OH686_02820 0.87 +0.8 592,262 - OH686_02820 0.87 +0.0 592,262 - OH686_02820 0.87 +0.3 592,680 + OH686_02825 0.32 +1.1 592,680 + OH686_02825 0.32 -0.5 592,680 + OH686_02825 0.32 +0.8 592,681 - OH686_02825 0.32 +0.1 592,982 + OH686_02825 0.71 +0.4 592,982 + OH686_02825 0.71 +1.2 592,983 - OH686_02825 0.71 +0.6 592,983 - OH686_02825 0.71 +1.3 592,983 - OH686_02825 0.71 +0.7 593,216 + -0.2 593,216 + +0.7 593,216 + +0.4 593,216 + +0.7 593,217 - -0.4 593,217 - -0.8 593,810 + OH686_02830 0.59 +1.4 593,810 + OH686_02830 0.59 +0.8 593,811 - OH686_02830 0.59 +0.0 593,811 - OH686_02830 0.59 +0.8 593,846 + OH686_02830 0.62 +0.3 593,985 + OH686_02830 0.76 +0.9 593,987 + OH686_02830 0.76 +0.0 593,987 + OH686_02830 0.76 -0.2 593,987 + OH686_02830 0.76 +0.5 593,987 + OH686_02830 0.76 -0.5 593,987 + OH686_02830 0.76 +0.5 593,987 + OH686_02830 0.76 +0.2 593,987 + OH686_02830 0.76 +0.6 593,987 + OH686_02830 0.76 +0.2 593,987 + OH686_02830 0.76 +0.4 593,987 + OH686_02830 0.76 +0.0 593,987 + OH686_02830 0.76 -1.3 593,987 + OH686_02830 0.76 +0.1 593,987 + OH686_02830 0.76 -0.1 593,988 - OH686_02830 0.76 +0.3 593,988 - OH686_02830 0.76 +1.4 593,988 - OH686_02830 0.76 -0.6 593,988 - OH686_02830 0.76 +0.4 593,988 - OH686_02830 0.76 +0.6 593,988 - OH686_02830 0.76 +0.3 593,988 - OH686_02830 0.76 +0.3 593,988 - OH686_02830 0.76 -1.6 593,988 - OH686_02830 0.76 +0.4 593,988 - OH686_02830 0.76 +0.4 594,254 + +0.1 594,254 + +1.2 594,255 - -0.1 594,318 + +0.8 594,319 - +0.0 594,319 - +0.1 594,536 + OH686_02835 0.17 +0.7 594,576 + OH686_02835 0.20 +0.2 594,577 - OH686_02835 0.20 -0.5 594,819 + OH686_02835 0.33 +0.4 594,819 + OH686_02835 0.33 +0.1 594,820 - OH686_02835 0.33 -0.2 594,820 - OH686_02835 0.33 +0.7 594,820 - OH686_02835 0.33 +0.8 594,820 - OH686_02835 0.33 +0.0 594,820 - OH686_02835 0.33 +0.3 594,820 - OH686_02835 0.33 +0.3 594,820 - OH686_02835 0.33 +0.7 595,063 + OH686_02835 0.47 +0.2 595,063 + OH686_02835 0.47 -0.1 595,063 + OH686_02835 0.47 +0.3 595,063 + OH686_02835 0.47 +0.1 595,063 + OH686_02835 0.47 +0.3 595,063 + OH686_02835 0.47 +0.2 595,063 + OH686_02835 0.47 +0.7 595,063 + OH686_02835 0.47 +0.6 595,063 + OH686_02835 0.47 +0.1 595,063 + OH686_02835 0.47 +0.5 595,064 - OH686_02835 0.47 -0.3 595,064 - OH686_02835 0.47 +0.4 595,064 - OH686_02835 0.47 +0.7 595,064 - OH686_02835 0.47 +0.2 595,185 + OH686_02835 0.53 -0.3 595,185 + OH686_02835 0.53 +0.5 595,186 - OH686_02835 0.54 +0.3 595,186 - OH686_02835 0.54 +0.6 595,186 - OH686_02835 0.54 +0.4
Or see this region's nucleotide sequence