Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_02785 and OH686_02790 are separated by 12 nucleotides OH686_02790 and OH686_02795 are separated by 209 nucleotides OH686_02795 and OH686_02800 are separated by 70 nucleotides OH686_02800 and OH686_02805 are separated by 29 nucleotides
OH686_02785: OH686_02785 - flagellar motor switch protein FliM, at 585,079 to 586,050
_02785
OH686_02790: OH686_02790 - Flagellar basal body-associated protein FliL, at 586,063 to 586,599
_02790
OH686_02795: OH686_02795 - Flagellar hook-length control protein FliK, at 586,809 to 588,101
_02795
OH686_02800: OH686_02800 - Hpt domain protein, at 588,172 to 588,522
_02800
OH686_02805: OH686_02805 - Serine phosphatase RsbU, regulator of sigma subunit / Serine-protein kinase RsbW , at 588,552 to 590,246
_02805
Position (kb) 586
587
588
589 Strain fitness (log2 ratio) -2
-1
0
1
2 at 585.861 kb on - strand, within OH686_02785 at 585.938 kb on + strand, within OH686_02785 at 585.938 kb on + strand, within OH686_02785 at 585.938 kb on + strand, within OH686_02785 at 585.938 kb on + strand, within OH686_02785 at 585.939 kb on - strand, within OH686_02785 at 585.939 kb on - strand, within OH686_02785 at 586.042 kb on + strand at 586.042 kb on + strand at 586.042 kb on + strand at 586.042 kb on + strand at 586.042 kb on + strand at 586.042 kb on + strand at 586.043 kb on - strand at 586.043 kb on - strand at 586.043 kb on - strand at 586.064 kb on + strand at 586.064 kb on + strand at 586.064 kb on + strand at 586.064 kb on + strand at 586.065 kb on - strand at 586.090 kb on + strand at 586.090 kb on + strand at 586.090 kb on + strand at 586.090 kb on + strand at 586.090 kb on + strand at 586.090 kb on + strand at 586.090 kb on + strand at 586.090 kb on + strand at 586.090 kb on + strand at 586.091 kb on - strand at 586.091 kb on - strand at 586.091 kb on - strand at 586.091 kb on - strand at 586.313 kb on + strand, within OH686_02790 at 586.313 kb on + strand, within OH686_02790 at 586.313 kb on + strand, within OH686_02790 at 586.313 kb on + strand, within OH686_02790 at 586.313 kb on + strand, within OH686_02790 at 586.313 kb on + strand, within OH686_02790 at 586.314 kb on - strand, within OH686_02790 at 586.314 kb on - strand, within OH686_02790 at 586.314 kb on - strand, within OH686_02790 at 586.314 kb on - strand, within OH686_02790 at 586.337 kb on + strand, within OH686_02790 at 586.337 kb on + strand, within OH686_02790 at 586.337 kb on + strand, within OH686_02790 at 586.337 kb on + strand, within OH686_02790 at 586.337 kb on + strand, within OH686_02790 at 586.337 kb on + strand, within OH686_02790 at 586.337 kb on + strand, within OH686_02790 at 586.337 kb on + strand, within OH686_02790 at 586.338 kb on - strand, within OH686_02790 at 586.338 kb on - strand, within OH686_02790 at 586.338 kb on - strand, within OH686_02790 at 586.338 kb on - strand, within OH686_02790 at 586.338 kb on - strand, within OH686_02790 at 586.338 kb on - strand, within OH686_02790 at 586.338 kb on - strand, within OH686_02790 at 586.338 kb on - strand, within OH686_02790 at 586.338 kb on - strand, within OH686_02790 at 586.370 kb on + strand, within OH686_02790 at 586.371 kb on - strand, within OH686_02790 at 586.371 kb on - strand, within OH686_02790 at 586.617 kb on - strand at 586.617 kb on - strand at 586.646 kb on + strand at 586.646 kb on + strand at 586.647 kb on - strand at 586.671 kb on + strand at 586.681 kb on - strand at 586.715 kb on + strand at 586.715 kb on + strand at 586.715 kb on + strand at 586.716 kb on - strand at 586.716 kb on - strand at 586.717 kb on + strand at 586.717 kb on + strand at 586.717 kb on + strand at 586.717 kb on + strand at 586.718 kb on - strand at 586.718 kb on - strand at 586.718 kb on - strand at 586.718 kb on - strand at 586.718 kb on - strand at 586.718 kb on - strand at 586.718 kb on - strand at 586.718 kb on - strand at 586.718 kb on - strand at 586.718 kb on - strand at 586.718 kb on - strand at 586.718 kb on - strand at 586.718 kb on - strand at 586.787 kb on + strand at 586.787 kb on + strand at 586.788 kb on - strand at 586.816 kb on + strand at 586.816 kb on + strand at 586.816 kb on + strand at 586.816 kb on + strand at 586.816 kb on + strand at 586.816 kb on + strand at 586.816 kb on + strand at 586.816 kb on + strand at 586.817 kb on - strand at 586.817 kb on - strand at 586.817 kb on - strand at 586.819 kb on + strand at 586.819 kb on + strand at 586.819 kb on + strand at 586.819 kb on + strand at 586.819 kb on + strand at 586.819 kb on + strand at 586.819 kb on + strand at 586.820 kb on - strand at 586.820 kb on - strand at 586.925 kb on + strand at 586.926 kb on - strand at 586.926 kb on - strand at 586.955 kb on + strand, within OH686_02795 at 586.955 kb on + strand, within OH686_02795 at 586.955 kb on + strand, within OH686_02795 at 587.687 kb on + strand, within OH686_02795 at 587.687 kb on + strand, within OH686_02795 at 587.688 kb on - strand, within OH686_02795 at 587.688 kb on - strand, within OH686_02795 at 587.974 kb on + strand at 587.974 kb on + strand at 587.975 kb on - strand at 588.105 kb on + strand at 588.105 kb on + strand at 588.105 kb on + strand at 588.105 kb on + strand at 588.105 kb on + strand at 588.106 kb on - strand at 588.106 kb on - strand at 588.106 kb on - strand at 588.106 kb on - strand at 588.115 kb on + strand at 588.116 kb on - strand at 588.289 kb on + strand, within OH686_02800 at 588.289 kb on + strand, within OH686_02800 at 588.289 kb on + strand, within OH686_02800 at 588.289 kb on + strand, within OH686_02800 at 588.289 kb on + strand, within OH686_02800 at 588.289 kb on + strand, within OH686_02800 at 588.290 kb on - strand, within OH686_02800 at 588.290 kb on - strand, within OH686_02800 at 588.290 kb on - strand, within OH686_02800 at 588.290 kb on - strand, within OH686_02800 at 588.290 kb on - strand, within OH686_02800 at 588.405 kb on + strand, within OH686_02800 at 588.441 kb on + strand, within OH686_02800 at 588.441 kb on + strand, within OH686_02800 at 588.442 kb on - strand, within OH686_02800 at 588.458 kb on + strand, within OH686_02800 at 588.459 kb on - strand, within OH686_02800 at 588.459 kb on - strand, within OH686_02800 at 588.553 kb on + strand at 588.554 kb on - strand at 588.554 kb on - strand at 588.554 kb on - strand at 588.826 kb on + strand, within OH686_02805 at 588.826 kb on + strand, within OH686_02805 at 588.826 kb on + strand, within OH686_02805 at 588.827 kb on - strand, within OH686_02805 at 588.827 kb on - strand, within OH686_02805 at 588.827 kb on - strand, within OH686_02805 at 588.829 kb on + strand, within OH686_02805 at 588.829 kb on + strand, within OH686_02805 at 588.829 kb on + strand, within OH686_02805 at 588.830 kb on - strand, within OH686_02805 at 588.904 kb on + strand, within OH686_02805 at 588.904 kb on + strand, within OH686_02805 at 588.904 kb on + strand, within OH686_02805 at 588.904 kb on + strand, within OH686_02805 at 588.904 kb on + strand, within OH686_02805 at 588.904 kb on + strand, within OH686_02805 at 588.904 kb on + strand, within OH686_02805 at 588.904 kb on + strand, within OH686_02805 at 588.904 kb on + strand, within OH686_02805 at 588.905 kb on - strand, within OH686_02805 at 588.905 kb on - strand, within OH686_02805 at 588.905 kb on - strand, within OH686_02805 at 588.905 kb on - strand, within OH686_02805 at 588.905 kb on - strand, within OH686_02805 at 588.925 kb on + strand, within OH686_02805 at 588.925 kb on + strand, within OH686_02805 at 588.925 kb on + strand, within OH686_02805 at 588.925 kb on + strand, within OH686_02805 at 588.925 kb on + strand, within OH686_02805 at 588.926 kb on - strand, within OH686_02805 at 588.926 kb on - strand, within OH686_02805 at 588.926 kb on - strand, within OH686_02805
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 585,861 - OH686_02785 0.80 -0.1 585,938 + OH686_02785 0.88 -0.0 585,938 + OH686_02785 0.88 +0.0 585,938 + OH686_02785 0.88 +0.7 585,938 + OH686_02785 0.88 +0.1 585,939 - OH686_02785 0.88 +1.1 585,939 - OH686_02785 0.88 +1.0 586,042 + -0.0 586,042 + -0.3 586,042 + -0.7 586,042 + -0.5 586,042 + +0.4 586,042 + +0.2 586,043 - -0.5 586,043 - -0.1 586,043 - -0.2 586,064 + +0.7 586,064 + +0.4 586,064 + +0.1 586,064 + +0.3 586,065 - +0.3 586,090 + -0.2 586,090 + +0.9 586,090 + +0.8 586,090 + -0.9 586,090 + +0.4 586,090 + +0.2 586,090 + +0.2 586,090 + +0.9 586,090 + +0.7 586,091 - -0.6 586,091 - +0.1 586,091 - +0.5 586,091 - +0.3 586,313 + OH686_02790 0.47 +0.5 586,313 + OH686_02790 0.47 +0.1 586,313 + OH686_02790 0.47 +0.9 586,313 + OH686_02790 0.47 +0.0 586,313 + OH686_02790 0.47 -0.4 586,313 + OH686_02790 0.47 +0.8 586,314 - OH686_02790 0.47 -0.2 586,314 - OH686_02790 0.47 +0.2 586,314 - OH686_02790 0.47 -0.4 586,314 - OH686_02790 0.47 -1.2 586,337 + OH686_02790 0.51 +0.2 586,337 + OH686_02790 0.51 -0.1 586,337 + OH686_02790 0.51 +1.8 586,337 + OH686_02790 0.51 +0.0 586,337 + OH686_02790 0.51 -0.9 586,337 + OH686_02790 0.51 +0.7 586,337 + OH686_02790 0.51 +0.1 586,337 + OH686_02790 0.51 -0.4 586,338 - OH686_02790 0.51 +0.7 586,338 - OH686_02790 0.51 -0.7 586,338 - OH686_02790 0.51 -0.3 586,338 - OH686_02790 0.51 +0.2 586,338 - OH686_02790 0.51 +0.7 586,338 - OH686_02790 0.51 +0.3 586,338 - OH686_02790 0.51 -0.7 586,338 - OH686_02790 0.51 -0.6 586,338 - OH686_02790 0.51 +0.5 586,370 + OH686_02790 0.57 +0.5 586,371 - OH686_02790 0.57 -0.1 586,371 - OH686_02790 0.57 +0.1 586,617 - -0.0 586,617 - -0.1 586,646 + -0.9 586,646 + +0.7 586,647 - +0.2 586,671 + -0.5 586,681 - -0.5 586,715 + -1.1 586,715 + +0.6 586,715 + +0.5 586,716 - +0.7 586,716 - +0.3 586,717 + +0.3 586,717 + -1.1 586,717 + -1.4 586,717 + +0.5 586,718 - -0.1 586,718 - +0.0 586,718 - +0.1 586,718 - +0.1 586,718 - +0.3 586,718 - +0.0 586,718 - -0.6 586,718 - -0.3 586,718 - +0.7 586,718 - -0.1 586,718 - -2.2 586,718 - +0.1 586,718 - -2.1 586,787 + -0.1 586,787 + +0.3 586,788 - +0.7 586,816 + +0.3 586,816 + +0.0 586,816 + -0.1 586,816 + -0.0 586,816 + +0.1 586,816 + -0.3 586,816 + +0.5 586,816 + +0.6 586,817 - +0.5 586,817 - -0.6 586,817 - +0.9 586,819 + +0.0 586,819 + +0.3 586,819 + +0.3 586,819 + +0.1 586,819 + -1.7 586,819 + +0.3 586,819 + +0.1 586,820 - +0.5 586,820 - +0.1 586,925 + +0.9 586,926 - -0.4 586,926 - +0.4 586,955 + OH686_02795 0.11 -0.1 586,955 + OH686_02795 0.11 +0.6 586,955 + OH686_02795 0.11 +0.2 587,687 + OH686_02795 0.68 -0.0 587,687 + OH686_02795 0.68 +0.6 587,688 - OH686_02795 0.68 -0.1 587,688 - OH686_02795 0.68 +1.5 587,974 + -0.8 587,974 + +1.2 587,975 - -0.9 588,105 + +0.1 588,105 + +0.9 588,105 + +0.9 588,105 + +1.0 588,105 + -0.6 588,106 - -0.3 588,106 - -0.6 588,106 - +0.1 588,106 - -1.4 588,115 + +0.8 588,116 - -1.3 588,289 + OH686_02800 0.33 +1.2 588,289 + OH686_02800 0.33 +0.4 588,289 + OH686_02800 0.33 +0.1 588,289 + OH686_02800 0.33 +1.3 588,289 + OH686_02800 0.33 -1.1 588,289 + OH686_02800 0.33 +0.7 588,290 - OH686_02800 0.34 +0.5 588,290 - OH686_02800 0.34 +0.3 588,290 - OH686_02800 0.34 -1.3 588,290 - OH686_02800 0.34 +0.2 588,290 - OH686_02800 0.34 -0.9 588,405 + OH686_02800 0.66 +0.3 588,441 + OH686_02800 0.77 +1.5 588,441 + OH686_02800 0.77 +1.3 588,442 - OH686_02800 0.77 -0.0 588,458 + OH686_02800 0.81 -0.9 588,459 - OH686_02800 0.82 -1.1 588,459 - OH686_02800 0.82 +0.1 588,553 + -0.2 588,554 - -0.9 588,554 - +0.2 588,554 - +0.6 588,826 + OH686_02805 0.16 -0.9 588,826 + OH686_02805 0.16 +0.5 588,826 + OH686_02805 0.16 -0.1 588,827 - OH686_02805 0.16 -0.4 588,827 - OH686_02805 0.16 -1.1 588,827 - OH686_02805 0.16 -0.5 588,829 + OH686_02805 0.16 -2.0 588,829 + OH686_02805 0.16 -0.4 588,829 + OH686_02805 0.16 -0.2 588,830 - OH686_02805 0.16 -0.2 588,904 + OH686_02805 0.21 -1.0 588,904 + OH686_02805 0.21 -0.4 588,904 + OH686_02805 0.21 +0.1 588,904 + OH686_02805 0.21 +0.1 588,904 + OH686_02805 0.21 +0.2 588,904 + OH686_02805 0.21 -0.9 588,904 + OH686_02805 0.21 -0.3 588,904 + OH686_02805 0.21 -0.3 588,904 + OH686_02805 0.21 -0.5 588,905 - OH686_02805 0.21 +0.4 588,905 - OH686_02805 0.21 -0.4 588,905 - OH686_02805 0.21 +0.1 588,905 - OH686_02805 0.21 -0.5 588,905 - OH686_02805 0.21 -0.6 588,925 + OH686_02805 0.22 -0.9 588,925 + OH686_02805 0.22 +0.1 588,925 + OH686_02805 0.22 +1.4 588,925 + OH686_02805 0.22 -1.1 588,925 + OH686_02805 0.22 -1.0 588,926 - OH686_02805 0.22 -0.6 588,926 - OH686_02805 0.22 -0.2 588,926 - OH686_02805 0.22 +0.4
Or see this region's nucleotide sequence