Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_02740 and OH686_02745 are separated by 12 nucleotides OH686_02745 and OH686_02750 are separated by 166 nucleotides OH686_02750 and OH686_02755 are separated by 4 nucleotides
OH686_02740: OH686_02740 - flagellar biosynthesis protein FlhF, at 576,953 to 578,278
_02740
OH686_02745: OH686_02745 - flagellar biosynthesis protein FlhA, at 578,291 to 580,420
_02745
OH686_02750: OH686_02750 - Superoxide dismutase [Cu-Zn] precursor , at 580,587 to 581,108
_02750
OH686_02755: OH686_02755 - flagellar biosynthetic protein FlhB, at 581,113 to 582,249
_02755
Position (kb) 578
579
580
581 Strain fitness (log2 ratio) -1
0
1 at 577.442 kb on + strand, within OH686_02740 at 577.442 kb on + strand, within OH686_02740 at 577.443 kb on - strand, within OH686_02740 at 577.534 kb on - strand, within OH686_02740 at 577.534 kb on - strand, within OH686_02740 at 577.545 kb on + strand, within OH686_02740 at 577.546 kb on - strand, within OH686_02740 at 577.546 kb on - strand, within OH686_02740 at 577.546 kb on - strand, within OH686_02740 at 577.835 kb on + strand, within OH686_02740 at 577.835 kb on + strand, within OH686_02740 at 577.835 kb on + strand, within OH686_02740 at 577.835 kb on + strand, within OH686_02740 at 577.835 kb on + strand, within OH686_02740 at 577.835 kb on + strand, within OH686_02740 at 577.835 kb on + strand, within OH686_02740 at 577.836 kb on - strand, within OH686_02740 at 577.836 kb on - strand, within OH686_02740 at 577.836 kb on - strand, within OH686_02740 at 577.836 kb on - strand, within OH686_02740 at 577.836 kb on - strand, within OH686_02740 at 577.836 kb on - strand, within OH686_02740 at 577.836 kb on - strand, within OH686_02740 at 577.836 kb on - strand, within OH686_02740 at 577.836 kb on - strand, within OH686_02740 at 578.142 kb on + strand, within OH686_02740 at 578.142 kb on + strand, within OH686_02740 at 578.143 kb on - strand, within OH686_02740 at 578.143 kb on - strand, within OH686_02740 at 578.243 kb on - strand at 578.283 kb on + strand at 578.283 kb on + strand at 578.283 kb on + strand at 578.283 kb on + strand at 578.284 kb on - strand at 578.284 kb on - strand at 578.308 kb on + strand at 578.309 kb on - strand at 578.349 kb on + strand at 578.350 kb on - strand at 578.357 kb on + strand at 578.357 kb on + strand at 578.357 kb on + strand at 578.357 kb on + strand at 578.357 kb on + strand at 578.358 kb on - strand at 578.358 kb on - strand at 578.358 kb on - strand at 578.358 kb on - strand at 578.358 kb on - strand at 578.358 kb on - strand at 578.564 kb on + strand, within OH686_02745 at 578.565 kb on - strand, within OH686_02745 at 578.565 kb on - strand, within OH686_02745 at 578.586 kb on - strand, within OH686_02745 at 578.586 kb on - strand, within OH686_02745 at 578.586 kb on - strand, within OH686_02745 at 578.613 kb on - strand, within OH686_02745 at 578.771 kb on + strand, within OH686_02745 at 578.771 kb on + strand, within OH686_02745 at 578.771 kb on + strand, within OH686_02745 at 578.771 kb on + strand, within OH686_02745 at 578.772 kb on - strand, within OH686_02745 at 578.772 kb on - strand, within OH686_02745 at 578.772 kb on - strand, within OH686_02745 at 578.772 kb on - strand, within OH686_02745 at 578.956 kb on - strand, within OH686_02745 at 579.093 kb on + strand, within OH686_02745 at 579.093 kb on + strand, within OH686_02745 at 579.093 kb on + strand, within OH686_02745 at 579.139 kb on - strand, within OH686_02745 at 579.173 kb on - strand, within OH686_02745 at 579.441 kb on + strand, within OH686_02745 at 579.441 kb on + strand, within OH686_02745 at 579.441 kb on + strand, within OH686_02745 at 579.690 kb on + strand, within OH686_02745 at 579.690 kb on + strand, within OH686_02745 at 579.690 kb on + strand, within OH686_02745 at 579.690 kb on + strand, within OH686_02745 at 579.690 kb on + strand, within OH686_02745 at 579.690 kb on + strand, within OH686_02745 at 579.690 kb on + strand, within OH686_02745 at 579.690 kb on + strand, within OH686_02745 at 579.690 kb on + strand, within OH686_02745 at 579.691 kb on - strand, within OH686_02745 at 579.691 kb on - strand, within OH686_02745 at 579.691 kb on - strand, within OH686_02745 at 579.691 kb on - strand, within OH686_02745 at 579.691 kb on - strand, within OH686_02745 at 579.691 kb on - strand, within OH686_02745 at 579.691 kb on - strand, within OH686_02745 at 579.691 kb on - strand, within OH686_02745 at 579.691 kb on - strand, within OH686_02745 at 579.831 kb on + strand, within OH686_02745 at 579.832 kb on - strand, within OH686_02745 at 579.832 kb on - strand, within OH686_02745 at 579.832 kb on - strand, within OH686_02745 at 579.832 kb on - strand, within OH686_02745 at 579.832 kb on - strand, within OH686_02745 at 579.832 kb on - strand, within OH686_02745 at 579.832 kb on - strand, within OH686_02745 at 579.832 kb on - strand, within OH686_02745 at 579.832 kb on - strand, within OH686_02745 at 580.047 kb on + strand, within OH686_02745 at 580.047 kb on + strand, within OH686_02745 at 580.047 kb on + strand, within OH686_02745 at 580.047 kb on + strand, within OH686_02745 at 580.047 kb on + strand, within OH686_02745 at 580.047 kb on + strand, within OH686_02745 at 580.047 kb on + strand, within OH686_02745 at 580.047 kb on + strand, within OH686_02745 at 580.047 kb on + strand, within OH686_02745 at 580.047 kb on + strand, within OH686_02745 at 580.047 kb on + strand, within OH686_02745 at 580.047 kb on + strand, within OH686_02745 at 580.047 kb on + strand, within OH686_02745 at 580.047 kb on + strand, within OH686_02745 at 580.047 kb on + strand, within OH686_02745 at 580.048 kb on - strand, within OH686_02745 at 580.048 kb on - strand, within OH686_02745 at 580.048 kb on - strand, within OH686_02745 at 580.048 kb on - strand, within OH686_02745 at 580.048 kb on - strand, within OH686_02745 at 580.048 kb on - strand, within OH686_02745 at 580.048 kb on - strand, within OH686_02745 at 580.048 kb on - strand, within OH686_02745 at 580.048 kb on - strand, within OH686_02745 at 580.048 kb on - strand, within OH686_02745 at 580.048 kb on - strand, within OH686_02745 at 580.048 kb on - strand, within OH686_02745 at 580.048 kb on - strand, within OH686_02745 at 580.048 kb on - strand, within OH686_02745 at 580.048 kb on - strand, within OH686_02745 at 580.048 kb on - strand, within OH686_02745 at 580.061 kb on + strand, within OH686_02745 at 580.061 kb on + strand, within OH686_02745 at 580.061 kb on + strand, within OH686_02745 at 580.061 kb on + strand, within OH686_02745 at 580.062 kb on - strand, within OH686_02745 at 580.062 kb on - strand, within OH686_02745 at 580.062 kb on - strand, within OH686_02745 at 580.062 kb on - strand, within OH686_02745 at 580.062 kb on - strand, within OH686_02745 at 580.062 kb on - strand, within OH686_02745 at 580.062 kb on - strand, within OH686_02745 at 580.062 kb on - strand, within OH686_02745 at 580.062 kb on - strand, within OH686_02745 at 580.062 kb on - strand, within OH686_02745 at 580.062 kb on - strand, within OH686_02745 at 580.062 kb on - strand, within OH686_02745 at 580.062 kb on - strand, within OH686_02745 at 580.062 kb on - strand, within OH686_02745 at 580.196 kb on + strand, within OH686_02745 at 580.224 kb on + strand at 580.224 kb on + strand at 580.224 kb on + strand at 580.224 kb on + strand at 580.224 kb on + strand at 580.224 kb on + strand at 580.224 kb on + strand at 580.224 kb on + strand at 580.225 kb on - strand at 580.225 kb on - strand at 580.225 kb on - strand at 580.225 kb on - strand at 580.225 kb on - strand at 580.225 kb on - strand at 580.385 kb on + strand at 580.385 kb on + strand at 580.385 kb on + strand at 580.385 kb on + strand at 580.385 kb on + strand at 580.385 kb on + strand at 580.385 kb on + strand at 580.385 kb on + strand at 580.385 kb on + strand at 580.385 kb on + strand at 580.385 kb on + strand at 580.385 kb on + strand at 580.385 kb on + strand at 580.385 kb on + strand at 580.385 kb on + strand at 580.385 kb on + strand at 580.385 kb on + strand at 580.385 kb on + strand at 580.385 kb on + strand at 580.385 kb on + strand at 580.386 kb on - strand at 580.386 kb on - strand at 580.386 kb on - strand at 580.386 kb on - strand at 580.386 kb on - strand at 580.426 kb on + strand at 580.475 kb on + strand at 580.522 kb on - strand at 580.544 kb on - strand at 580.544 kb on - strand at 580.544 kb on - strand at 580.544 kb on - strand at 580.544 kb on - strand at 580.622 kb on - strand at 580.725 kb on + strand, within OH686_02750 at 580.935 kb on + strand, within OH686_02750 at 580.935 kb on + strand, within OH686_02750 at 580.935 kb on + strand, within OH686_02750 at 580.935 kb on + strand, within OH686_02750 at 580.935 kb on + strand, within OH686_02750 at 580.935 kb on + strand, within OH686_02750 at 580.935 kb on + strand, within OH686_02750 at 580.935 kb on + strand, within OH686_02750 at 580.935 kb on + strand, within OH686_02750 at 580.935 kb on + strand, within OH686_02750 at 580.936 kb on - strand, within OH686_02750 at 580.936 kb on - strand, within OH686_02750 at 580.936 kb on - strand, within OH686_02750 at 581.128 kb on + strand at 581.128 kb on + strand at 581.128 kb on + strand at 581.129 kb on - strand at 581.129 kb on - strand at 581.210 kb on + strand at 581.210 kb on + strand at 581.210 kb on + strand at 581.210 kb on + strand at 581.210 kb on + strand at 581.210 kb on + strand at 581.210 kb on + strand at 581.211 kb on - strand at 581.211 kb on - strand at 581.211 kb on - strand at 581.211 kb on - strand at 581.211 kb on - strand at 581.211 kb on - strand at 581.211 kb on - strand at 581.218 kb on + strand at 581.218 kb on + strand at 581.219 kb on - strand at 581.219 kb on - strand at 581.237 kb on + strand, within OH686_02755 at 581.237 kb on + strand, within OH686_02755 at 581.237 kb on + strand, within OH686_02755 at 581.238 kb on - strand, within OH686_02755 at 581.238 kb on - strand, within OH686_02755 at 581.238 kb on - strand, within OH686_02755 at 581.238 kb on - strand, within OH686_02755 at 581.238 kb on - strand, within OH686_02755 at 581.276 kb on + strand, within OH686_02755 at 581.276 kb on + strand, within OH686_02755 at 581.276 kb on + strand, within OH686_02755 at 581.277 kb on - strand, within OH686_02755 at 581.277 kb on - strand, within OH686_02755 at 581.277 kb on - strand, within OH686_02755 at 581.277 kb on - strand, within OH686_02755 at 581.277 kb on - strand, within OH686_02755 at 581.277 kb on - strand, within OH686_02755 at 581.412 kb on - strand, within OH686_02755 at 581.412 kb on - strand, within OH686_02755 at 581.412 kb on - strand, within OH686_02755 at 581.412 kb on - strand, within OH686_02755 at 581.412 kb on - strand, within OH686_02755
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 577,442 + OH686_02740 0.37 +0.2 577,442 + OH686_02740 0.37 +0.2 577,443 - OH686_02740 0.37 +0.3 577,534 - OH686_02740 0.44 -1.3 577,534 - OH686_02740 0.44 -0.3 577,545 + OH686_02740 0.45 -0.2 577,546 - OH686_02740 0.45 -0.2 577,546 - OH686_02740 0.45 -1.1 577,546 - OH686_02740 0.45 +0.7 577,835 + OH686_02740 0.67 +0.0 577,835 + OH686_02740 0.67 +0.1 577,835 + OH686_02740 0.67 -0.1 577,835 + OH686_02740 0.67 +0.4 577,835 + OH686_02740 0.67 +0.5 577,835 + OH686_02740 0.67 -0.3 577,835 + OH686_02740 0.67 +0.3 577,836 - OH686_02740 0.67 -0.2 577,836 - OH686_02740 0.67 +0.6 577,836 - OH686_02740 0.67 +0.5 577,836 - OH686_02740 0.67 +0.0 577,836 - OH686_02740 0.67 +0.7 577,836 - OH686_02740 0.67 +0.4 577,836 - OH686_02740 0.67 -0.4 577,836 - OH686_02740 0.67 -0.6 577,836 - OH686_02740 0.67 +0.2 578,142 + OH686_02740 0.90 -0.3 578,142 + OH686_02740 0.90 +0.8 578,143 - OH686_02740 0.90 +0.9 578,143 - OH686_02740 0.90 +0.1 578,243 - +0.3 578,283 + +1.1 578,283 + +0.6 578,283 + +1.2 578,283 + +0.5 578,284 - +0.0 578,284 - +0.6 578,308 + +0.7 578,309 - +0.1 578,349 + -0.3 578,350 - +0.5 578,357 + +0.5 578,357 + +0.1 578,357 + +1.3 578,357 + +0.0 578,357 + +1.4 578,358 - -0.3 578,358 - -0.4 578,358 - -0.3 578,358 - +0.5 578,358 - +0.6 578,358 - +0.5 578,564 + OH686_02745 0.13 +0.4 578,565 - OH686_02745 0.13 +0.0 578,565 - OH686_02745 0.13 +0.4 578,586 - OH686_02745 0.14 +0.2 578,586 - OH686_02745 0.14 -0.4 578,586 - OH686_02745 0.14 +0.4 578,613 - OH686_02745 0.15 -0.3 578,771 + OH686_02745 0.23 +0.2 578,771 + OH686_02745 0.23 +0.8 578,771 + OH686_02745 0.23 +0.5 578,771 + OH686_02745 0.23 -0.1 578,772 - OH686_02745 0.23 +0.0 578,772 - OH686_02745 0.23 +0.3 578,772 - OH686_02745 0.23 +1.0 578,772 - OH686_02745 0.23 -0.1 578,956 - OH686_02745 0.31 +0.7 579,093 + OH686_02745 0.38 +0.3 579,093 + OH686_02745 0.38 +0.6 579,093 + OH686_02745 0.38 -0.8 579,139 - OH686_02745 0.40 +0.2 579,173 - OH686_02745 0.41 +0.3 579,441 + OH686_02745 0.54 -0.1 579,441 + OH686_02745 0.54 -0.1 579,441 + OH686_02745 0.54 +0.2 579,690 + OH686_02745 0.66 +0.5 579,690 + OH686_02745 0.66 -0.1 579,690 + OH686_02745 0.66 -0.4 579,690 + OH686_02745 0.66 +0.5 579,690 + OH686_02745 0.66 +0.0 579,690 + OH686_02745 0.66 +0.4 579,690 + OH686_02745 0.66 +0.2 579,690 + OH686_02745 0.66 +0.1 579,690 + OH686_02745 0.66 +0.4 579,691 - OH686_02745 0.66 -0.3 579,691 - OH686_02745 0.66 +0.1 579,691 - OH686_02745 0.66 +0.4 579,691 - OH686_02745 0.66 +1.2 579,691 - OH686_02745 0.66 +0.5 579,691 - OH686_02745 0.66 +0.5 579,691 - OH686_02745 0.66 +0.1 579,691 - OH686_02745 0.66 +0.3 579,691 - OH686_02745 0.66 +0.0 579,831 + OH686_02745 0.72 +0.9 579,832 - OH686_02745 0.72 +0.4 579,832 - OH686_02745 0.72 +0.2 579,832 - OH686_02745 0.72 +0.7 579,832 - OH686_02745 0.72 +0.6 579,832 - OH686_02745 0.72 -0.6 579,832 - OH686_02745 0.72 +0.9 579,832 - OH686_02745 0.72 +0.1 579,832 - OH686_02745 0.72 +0.7 579,832 - OH686_02745 0.72 +1.4 580,047 + OH686_02745 0.82 +0.3 580,047 + OH686_02745 0.82 -0.3 580,047 + OH686_02745 0.82 +0.7 580,047 + OH686_02745 0.82 -0.1 580,047 + OH686_02745 0.82 +0.2 580,047 + OH686_02745 0.82 +0.7 580,047 + OH686_02745 0.82 +0.3 580,047 + OH686_02745 0.82 -0.2 580,047 + OH686_02745 0.82 +0.9 580,047 + OH686_02745 0.82 +0.8 580,047 + OH686_02745 0.82 +0.8 580,047 + OH686_02745 0.82 +1.7 580,047 + OH686_02745 0.82 +1.1 580,047 + OH686_02745 0.82 -0.0 580,047 + OH686_02745 0.82 -0.4 580,048 - OH686_02745 0.82 -0.1 580,048 - OH686_02745 0.82 +0.1 580,048 - OH686_02745 0.82 +0.8 580,048 - OH686_02745 0.82 +0.8 580,048 - OH686_02745 0.82 +0.7 580,048 - OH686_02745 0.82 +1.0 580,048 - OH686_02745 0.82 +0.8 580,048 - OH686_02745 0.82 +0.8 580,048 - OH686_02745 0.82 -0.2 580,048 - OH686_02745 0.82 +0.4 580,048 - OH686_02745 0.82 +0.9 580,048 - OH686_02745 0.82 -0.1 580,048 - OH686_02745 0.82 +0.6 580,048 - OH686_02745 0.82 -1.7 580,048 - OH686_02745 0.82 +0.8 580,048 - OH686_02745 0.82 +0.3 580,061 + OH686_02745 0.83 +0.0 580,061 + OH686_02745 0.83 -0.7 580,061 + OH686_02745 0.83 -0.1 580,061 + OH686_02745 0.83 +0.9 580,062 - OH686_02745 0.83 -0.6 580,062 - OH686_02745 0.83 +0.7 580,062 - OH686_02745 0.83 +0.3 580,062 - OH686_02745 0.83 +0.1 580,062 - OH686_02745 0.83 +0.6 580,062 - OH686_02745 0.83 +0.1 580,062 - OH686_02745 0.83 +0.5 580,062 - OH686_02745 0.83 +1.6 580,062 - OH686_02745 0.83 +0.4 580,062 - OH686_02745 0.83 +0.5 580,062 - OH686_02745 0.83 -0.0 580,062 - OH686_02745 0.83 -0.3 580,062 - OH686_02745 0.83 +0.4 580,062 - OH686_02745 0.83 +0.8 580,196 + OH686_02745 0.89 +1.1 580,224 + +0.3 580,224 + -0.0 580,224 + +0.7 580,224 + +0.8 580,224 + +0.1 580,224 + +0.6 580,224 + -0.3 580,224 + +0.6 580,225 - +0.9 580,225 - -0.5 580,225 - -0.1 580,225 - +1.2 580,225 - +0.6 580,225 - +0.0 580,385 + -0.7 580,385 + -0.6 580,385 + +0.2 580,385 + +0.4 580,385 + +0.7 580,385 + -0.3 580,385 + -0.1 580,385 + +0.5 580,385 + -0.6 580,385 + +0.9 580,385 + +0.8 580,385 + +0.0 580,385 + +1.0 580,385 + +0.4 580,385 + +0.1 580,385 + -0.3 580,385 + -0.0 580,385 + +0.4 580,385 + +0.5 580,385 + +0.7 580,386 - +0.5 580,386 - +0.1 580,386 - +0.0 580,386 - +0.0 580,386 - +0.5 580,426 + +0.4 580,475 + -0.4 580,522 - +0.0 580,544 - -0.5 580,544 - -0.6 580,544 - -0.7 580,544 - +0.5 580,544 - +0.3 580,622 - +0.6 580,725 + OH686_02750 0.26 -0.0 580,935 + OH686_02750 0.67 +0.3 580,935 + OH686_02750 0.67 -0.5 580,935 + OH686_02750 0.67 -0.9 580,935 + OH686_02750 0.67 +0.5 580,935 + OH686_02750 0.67 -0.3 580,935 + OH686_02750 0.67 -0.6 580,935 + OH686_02750 0.67 -0.4 580,935 + OH686_02750 0.67 -0.3 580,935 + OH686_02750 0.67 +0.5 580,935 + OH686_02750 0.67 -0.5 580,936 - OH686_02750 0.67 -0.1 580,936 - OH686_02750 0.67 +0.4 580,936 - OH686_02750 0.67 +0.7 581,128 + +0.7 581,128 + +0.3 581,128 + +0.4 581,129 - +0.1 581,129 - -1.6 581,210 + +0.4 581,210 + -0.2 581,210 + +0.3 581,210 + +1.5 581,210 + +0.7 581,210 + +1.0 581,210 + +0.3 581,211 - +0.4 581,211 - +0.4 581,211 - -0.5 581,211 - +0.7 581,211 - +0.4 581,211 - +0.8 581,211 - +0.1 581,218 + +0.6 581,218 + +1.0 581,219 - +0.2 581,219 - +1.1 581,237 + OH686_02755 0.11 +0.7 581,237 + OH686_02755 0.11 -0.6 581,237 + OH686_02755 0.11 +0.1 581,238 - OH686_02755 0.11 +0.6 581,238 - OH686_02755 0.11 +0.8 581,238 - OH686_02755 0.11 +1.5 581,238 - OH686_02755 0.11 +0.9 581,238 - OH686_02755 0.11 +0.4 581,276 + OH686_02755 0.14 +1.1 581,276 + OH686_02755 0.14 -0.9 581,276 + OH686_02755 0.14 -0.4 581,277 - OH686_02755 0.14 +0.6 581,277 - OH686_02755 0.14 +0.1 581,277 - OH686_02755 0.14 +1.1 581,277 - OH686_02755 0.14 +0.5 581,277 - OH686_02755 0.14 +0.5 581,277 - OH686_02755 0.14 +0.7 581,412 - OH686_02755 0.26 +0.1 581,412 - OH686_02755 0.26 +0.3 581,412 - OH686_02755 0.26 +0.1 581,412 - OH686_02755 0.26 +0.8 581,412 - OH686_02755 0.26 +0.6
Or see this region's nucleotide sequence