Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_02190 and OH686_02195 overlap by 1 nucleotides OH686_02195 and OH686_02200 are separated by 18 nucleotides OH686_02200 and OH686_02205 overlap by 4 nucleotides OH686_02205 and OH686_02210 are separated by 133 nucleotides
OH686_02190: OH686_02190 - cytochrome c oxidase, cbb3-type, subunit I, at 470,932 to 472,374
_02190
OH686_02195: OH686_02195 - cytochrome c oxidase, cbb3-type, subunit II, at 472,374 to 472,991
_02195
OH686_02200: OH686_02200 - Cytochrome c oxidase (cbb3-type) subunit CcoQ , at 473,010 to 473,183
_02200
OH686_02205: OH686_02205 - cytochrome c oxidase, cbb3-type, subunit III, at 473,180 to 474,157
_02205
OH686_02210: OH686_02210 - cytochrome c oxidase accessory protein CcoG, at 474,291 to 475,706
_02210
Position (kb) 473
474
475 Strain fitness (log2 ratio) -2
-1
0
1
2 at 472.292 kb on - strand at 472.292 kb on - strand at 472.333 kb on + strand at 472.333 kb on + strand at 472.333 kb on + strand at 472.333 kb on + strand at 472.333 kb on + strand at 472.333 kb on + strand at 472.334 kb on - strand at 472.557 kb on + strand, within OH686_02195 at 472.557 kb on + strand, within OH686_02195 at 472.557 kb on + strand, within OH686_02195 at 472.557 kb on + strand, within OH686_02195 at 472.558 kb on - strand, within OH686_02195 at 472.756 kb on - strand, within OH686_02195 at 472.756 kb on - strand, within OH686_02195 at 472.879 kb on - strand, within OH686_02195 at 472.973 kb on + strand at 472.974 kb on - strand at 472.974 kb on - strand at 473.174 kb on + strand at 473.174 kb on + strand at 473.198 kb on - strand at 473.201 kb on + strand at 473.201 kb on + strand at 473.239 kb on - strand at 473.239 kb on - strand at 473.544 kb on - strand, within OH686_02205 at 473.678 kb on + strand, within OH686_02205 at 473.825 kb on + strand, within OH686_02205 at 473.993 kb on + strand, within OH686_02205 at 473.993 kb on + strand, within OH686_02205 at 473.993 kb on + strand, within OH686_02205 at 473.994 kb on - strand, within OH686_02205 at 474.005 kb on + strand, within OH686_02205 at 474.068 kb on + strand at 474.069 kb on - strand at 474.114 kb on - strand at 474.114 kb on - strand at 474.141 kb on + strand at 474.141 kb on + strand at 474.141 kb on + strand at 474.141 kb on + strand at 474.142 kb on - strand at 474.142 kb on - strand at 474.155 kb on + strand at 474.155 kb on + strand at 474.155 kb on + strand at 474.155 kb on + strand at 474.155 kb on + strand at 474.155 kb on + strand at 474.155 kb on + strand at 474.156 kb on - strand at 474.156 kb on - strand at 474.156 kb on - strand at 474.156 kb on - strand at 474.156 kb on - strand at 474.156 kb on - strand at 474.156 kb on - strand at 474.156 kb on - strand at 474.156 kb on - strand at 474.215 kb on + strand at 474.215 kb on + strand at 474.215 kb on + strand at 474.220 kb on + strand at 474.220 kb on + strand at 474.220 kb on + strand at 474.220 kb on + strand at 474.221 kb on - strand at 474.221 kb on - strand at 474.221 kb on - strand at 474.221 kb on - strand at 474.252 kb on + strand at 474.252 kb on + strand at 474.252 kb on + strand at 474.252 kb on + strand at 474.252 kb on + strand at 474.253 kb on - strand at 474.253 kb on - strand at 474.253 kb on - strand at 474.281 kb on + strand at 474.360 kb on + strand at 474.381 kb on + strand at 474.381 kb on + strand at 474.381 kb on + strand at 474.381 kb on + strand at 474.381 kb on + strand at 474.381 kb on + strand at 474.381 kb on + strand at 474.381 kb on + strand at 474.382 kb on - strand at 474.382 kb on - strand at 474.383 kb on + strand at 474.450 kb on + strand, within OH686_02210 at 474.450 kb on + strand, within OH686_02210 at 474.450 kb on + strand, within OH686_02210 at 474.450 kb on + strand, within OH686_02210 at 474.450 kb on + strand, within OH686_02210 at 474.450 kb on + strand, within OH686_02210 at 474.450 kb on + strand, within OH686_02210 at 474.451 kb on - strand, within OH686_02210 at 474.451 kb on - strand, within OH686_02210 at 474.451 kb on - strand, within OH686_02210 at 474.639 kb on + strand, within OH686_02210 at 474.639 kb on + strand, within OH686_02210 at 474.639 kb on + strand, within OH686_02210 at 474.639 kb on + strand, within OH686_02210 at 474.640 kb on - strand, within OH686_02210 at 474.707 kb on + strand, within OH686_02210 at 474.708 kb on - strand, within OH686_02210 at 474.820 kb on + strand, within OH686_02210 at 474.820 kb on + strand, within OH686_02210 at 474.820 kb on + strand, within OH686_02210 at 474.821 kb on - strand, within OH686_02210 at 474.821 kb on - strand, within OH686_02210 at 474.821 kb on - strand, within OH686_02210 at 474.821 kb on - strand, within OH686_02210 at 474.825 kb on + strand, within OH686_02210 at 474.825 kb on + strand, within OH686_02210 at 474.825 kb on + strand, within OH686_02210 at 474.826 kb on - strand, within OH686_02210 at 474.888 kb on + strand, within OH686_02210 at 474.888 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.960 kb on + strand, within OH686_02210 at 474.961 kb on - strand, within OH686_02210 at 474.961 kb on - strand, within OH686_02210 at 474.961 kb on - strand, within OH686_02210 at 474.961 kb on - strand, within OH686_02210 at 474.961 kb on - strand, within OH686_02210 at 474.961 kb on - strand, within OH686_02210 at 474.961 kb on - strand, within OH686_02210 at 474.961 kb on - strand, within OH686_02210 at 474.961 kb on - strand, within OH686_02210 at 474.961 kb on - strand, within OH686_02210 at 474.961 kb on - strand, within OH686_02210 at 474.961 kb on - strand, within OH686_02210 at 474.961 kb on - strand, within OH686_02210 at 474.961 kb on - strand, within OH686_02210 at 474.962 kb on + strand, within OH686_02210 at 474.962 kb on + strand, within OH686_02210 at 474.962 kb on + strand, within OH686_02210 at 474.962 kb on + strand, within OH686_02210 at 474.962 kb on + strand, within OH686_02210 at 474.962 kb on + strand, within OH686_02210 at 474.962 kb on + strand, within OH686_02210 at 474.962 kb on + strand, within OH686_02210 at 474.962 kb on + strand, within OH686_02210 at 474.962 kb on + strand, within OH686_02210 at 474.962 kb on + strand, within OH686_02210 at 474.962 kb on + strand, within OH686_02210 at 474.962 kb on + strand, within OH686_02210 at 474.962 kb on + strand, within OH686_02210 at 474.962 kb on + strand, within OH686_02210 at 474.962 kb on + strand, within OH686_02210 at 474.962 kb on + strand, within OH686_02210 at 474.962 kb on + strand, within OH686_02210 at 474.963 kb on - strand, within OH686_02210 at 474.963 kb on - strand, within OH686_02210 at 474.963 kb on - strand, within OH686_02210 at 474.963 kb on - strand, within OH686_02210 at 474.963 kb on - strand, within OH686_02210 at 474.963 kb on - strand, within OH686_02210 at 474.963 kb on - strand, within OH686_02210 at 474.963 kb on - strand, within OH686_02210 at 474.963 kb on - strand, within OH686_02210 at 474.963 kb on - strand, within OH686_02210 at 474.972 kb on + strand, within OH686_02210 at 474.972 kb on + strand, within OH686_02210 at 475.023 kb on + strand, within OH686_02210 at 475.074 kb on + strand, within OH686_02210 at 475.074 kb on + strand, within OH686_02210 at 475.074 kb on + strand, within OH686_02210 at 475.074 kb on + strand, within OH686_02210 at 475.075 kb on - strand, within OH686_02210 at 475.075 kb on - strand, within OH686_02210 at 475.075 kb on - strand, within OH686_02210
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 472,292 - +1.0 472,292 - -0.3 472,333 + -0.0 472,333 + -1.3 472,333 + -1.3 472,333 + +0.0 472,333 + +1.7 472,333 + +0.2 472,334 - -0.6 472,557 + OH686_02195 0.30 -0.3 472,557 + OH686_02195 0.30 -0.6 472,557 + OH686_02195 0.30 +0.0 472,557 + OH686_02195 0.30 +0.7 472,558 - OH686_02195 0.30 -0.6 472,756 - OH686_02195 0.62 +0.2 472,756 - OH686_02195 0.62 +1.7 472,879 - OH686_02195 0.82 -0.1 472,973 + -1.4 472,974 - +1.7 472,974 - +1.0 473,174 + +2.6 473,174 + +0.7 473,198 - -0.6 473,201 + +1.0 473,201 + +0.2 473,239 - -0.1 473,239 - +0.4 473,544 - OH686_02205 0.37 +1.4 473,678 + OH686_02205 0.51 -0.6 473,825 + OH686_02205 0.66 -0.6 473,993 + OH686_02205 0.83 +1.0 473,993 + OH686_02205 0.83 -1.6 473,993 + OH686_02205 0.83 +0.2 473,994 - OH686_02205 0.83 -0.3 474,005 + OH686_02205 0.84 -0.3 474,068 + -0.6 474,069 - -0.3 474,114 - +0.7 474,114 - +0.4 474,141 + -0.6 474,141 + +0.4 474,141 + -1.0 474,141 + +1.1 474,142 - +1.4 474,142 - -0.5 474,155 + -0.4 474,155 + +1.0 474,155 + +0.4 474,155 + -0.0 474,155 + -0.2 474,155 + +0.4 474,155 + -0.8 474,156 - -0.5 474,156 - -0.3 474,156 - +0.4 474,156 - -0.0 474,156 - +0.1 474,156 - -1.4 474,156 - +0.6 474,156 - +0.2 474,156 - -0.6 474,215 + -1.5 474,215 + -0.5 474,215 + +1.6 474,220 + +0.1 474,220 + -0.1 474,220 + +1.3 474,220 + -0.7 474,221 - +0.7 474,221 - +0.0 474,221 - +0.6 474,221 - -2.5 474,252 + -0.2 474,252 + -0.2 474,252 + -0.4 474,252 + -0.4 474,252 + +0.4 474,253 - -0.8 474,253 - -0.3 474,253 - +0.3 474,281 + +0.3 474,360 + +0.5 474,381 + -1.1 474,381 + +0.1 474,381 + +1.2 474,381 + -0.9 474,381 + -0.8 474,381 + -2.2 474,381 + +0.1 474,381 + -0.6 474,382 - +0.7 474,382 - +0.5 474,383 + -0.8 474,450 + OH686_02210 0.11 -0.8 474,450 + OH686_02210 0.11 -0.0 474,450 + OH686_02210 0.11 -0.4 474,450 + OH686_02210 0.11 -0.1 474,450 + OH686_02210 0.11 -0.4 474,450 + OH686_02210 0.11 -0.7 474,450 + OH686_02210 0.11 +0.3 474,451 - OH686_02210 0.11 -0.3 474,451 - OH686_02210 0.11 -1.4 474,451 - OH686_02210 0.11 -0.3 474,639 + OH686_02210 0.25 -0.9 474,639 + OH686_02210 0.25 -1.8 474,639 + OH686_02210 0.25 -0.4 474,639 + OH686_02210 0.25 -1.1 474,640 - OH686_02210 0.25 +0.0 474,707 + OH686_02210 0.29 -1.1 474,708 - OH686_02210 0.29 +0.1 474,820 + OH686_02210 0.37 -0.4 474,820 + OH686_02210 0.37 -0.3 474,820 + OH686_02210 0.37 +0.7 474,821 - OH686_02210 0.37 +0.3 474,821 - OH686_02210 0.37 +1.3 474,821 - OH686_02210 0.37 -1.2 474,821 - OH686_02210 0.37 -0.8 474,825 + OH686_02210 0.38 -1.6 474,825 + OH686_02210 0.38 +0.0 474,825 + OH686_02210 0.38 -0.6 474,826 - OH686_02210 0.38 +1.5 474,888 + OH686_02210 0.42 -0.5 474,888 + OH686_02210 0.42 +0.5 474,960 + OH686_02210 0.47 -0.5 474,960 + OH686_02210 0.47 -0.2 474,960 + OH686_02210 0.47 -0.1 474,960 + OH686_02210 0.47 -0.2 474,960 + OH686_02210 0.47 +0.4 474,960 + OH686_02210 0.47 -1.0 474,960 + OH686_02210 0.47 -0.7 474,960 + OH686_02210 0.47 -0.5 474,960 + OH686_02210 0.47 -2.0 474,960 + OH686_02210 0.47 +0.4 474,960 + OH686_02210 0.47 -0.3 474,960 + OH686_02210 0.47 -0.5 474,960 + OH686_02210 0.47 +0.2 474,960 + OH686_02210 0.47 -1.2 474,960 + OH686_02210 0.47 +0.3 474,960 + OH686_02210 0.47 -0.2 474,960 + OH686_02210 0.47 -0.3 474,960 + OH686_02210 0.47 -0.3 474,960 + OH686_02210 0.47 -1.4 474,960 + OH686_02210 0.47 +0.9 474,960 + OH686_02210 0.47 -0.6 474,960 + OH686_02210 0.47 -0.0 474,960 + OH686_02210 0.47 -0.6 474,960 + OH686_02210 0.47 +0.4 474,960 + OH686_02210 0.47 +0.3 474,960 + OH686_02210 0.47 +0.8 474,961 - OH686_02210 0.47 +0.2 474,961 - OH686_02210 0.47 -0.3 474,961 - OH686_02210 0.47 -0.8 474,961 - OH686_02210 0.47 -1.1 474,961 - OH686_02210 0.47 -0.8 474,961 - OH686_02210 0.47 -0.8 474,961 - OH686_02210 0.47 -1.1 474,961 - OH686_02210 0.47 -0.9 474,961 - OH686_02210 0.47 -1.0 474,961 - OH686_02210 0.47 +0.5 474,961 - OH686_02210 0.47 -1.8 474,961 - OH686_02210 0.47 -0.8 474,961 - OH686_02210 0.47 +0.7 474,961 - OH686_02210 0.47 +0.3 474,962 + OH686_02210 0.47 -0.8 474,962 + OH686_02210 0.47 -0.0 474,962 + OH686_02210 0.47 -0.3 474,962 + OH686_02210 0.47 -1.1 474,962 + OH686_02210 0.47 +0.1 474,962 + OH686_02210 0.47 -0.5 474,962 + OH686_02210 0.47 -0.5 474,962 + OH686_02210 0.47 +0.0 474,962 + OH686_02210 0.47 -1.1 474,962 + OH686_02210 0.47 -2.2 474,962 + OH686_02210 0.47 -0.5 474,962 + OH686_02210 0.47 -1.3 474,962 + OH686_02210 0.47 -0.1 474,962 + OH686_02210 0.47 -0.4 474,962 + OH686_02210 0.47 -0.1 474,962 + OH686_02210 0.47 -0.3 474,962 + OH686_02210 0.47 -1.1 474,962 + OH686_02210 0.47 +0.1 474,963 - OH686_02210 0.47 +0.7 474,963 - OH686_02210 0.47 +0.3 474,963 - OH686_02210 0.47 -1.1 474,963 - OH686_02210 0.47 -1.3 474,963 - OH686_02210 0.47 +0.2 474,963 - OH686_02210 0.47 +0.4 474,963 - OH686_02210 0.47 -0.7 474,963 - OH686_02210 0.47 -0.6 474,963 - OH686_02210 0.47 +0.0 474,963 - OH686_02210 0.47 +0.2 474,972 + OH686_02210 0.48 +0.7 474,972 + OH686_02210 0.48 +0.1 475,023 + OH686_02210 0.52 +0.6 475,074 + OH686_02210 0.55 +0.9 475,074 + OH686_02210 0.55 -0.4 475,074 + OH686_02210 0.55 -0.5 475,074 + OH686_02210 0.55 +0.6 475,075 - OH686_02210 0.55 -0.1 475,075 - OH686_02210 0.55 +0.4 475,075 - OH686_02210 0.55 -1.0
Or see this region's nucleotide sequence