Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_01880 and OH686_01885 are separated by 7 nucleotides OH686_01885 and OH686_01890 are separated by 4 nucleotides
OH686_01880: OH686_01880 - Bacterial patatin-like phospholipase domain containing protein, at 400,749 to 401,753
_01880
OH686_01885: OH686_01885 - DNA-binding response regulator KdpE, at 401,761 to 402,456
_01885
OH686_01890: OH686_01890 - Osmosensitive K+ channel histidine kinase KdpD, at 402,461 to 405,112
_01890
Position (kb) 401
402
403 Strain fitness (log2 ratio) -1
0
1 at 400.797 kb on + strand at 400.797 kb on + strand at 400.798 kb on - strand at 400.798 kb on - strand at 400.893 kb on + strand, within OH686_01880 at 400.893 kb on + strand, within OH686_01880 at 400.893 kb on + strand, within OH686_01880 at 400.893 kb on + strand, within OH686_01880 at 400.893 kb on + strand, within OH686_01880 at 400.893 kb on + strand, within OH686_01880 at 400.893 kb on + strand, within OH686_01880 at 400.893 kb on + strand, within OH686_01880 at 400.893 kb on + strand, within OH686_01880 at 400.894 kb on - strand, within OH686_01880 at 400.894 kb on - strand, within OH686_01880 at 400.894 kb on - strand, within OH686_01880 at 400.894 kb on - strand, within OH686_01880 at 400.894 kb on - strand, within OH686_01880 at 400.894 kb on - strand, within OH686_01880 at 400.894 kb on - strand, within OH686_01880 at 400.944 kb on + strand, within OH686_01880 at 400.944 kb on + strand, within OH686_01880 at 400.944 kb on + strand, within OH686_01880 at 400.945 kb on - strand, within OH686_01880 at 400.945 kb on - strand, within OH686_01880 at 401.029 kb on + strand, within OH686_01880 at 401.030 kb on - strand, within OH686_01880 at 401.030 kb on - strand, within OH686_01880 at 401.068 kb on - strand, within OH686_01880 at 401.068 kb on - strand, within OH686_01880 at 401.304 kb on + strand, within OH686_01880 at 401.304 kb on + strand, within OH686_01880 at 401.304 kb on + strand, within OH686_01880 at 401.304 kb on + strand, within OH686_01880 at 401.304 kb on + strand, within OH686_01880 at 401.305 kb on - strand, within OH686_01880 at 401.305 kb on - strand, within OH686_01880 at 401.305 kb on - strand, within OH686_01880 at 401.305 kb on - strand, within OH686_01880 at 401.305 kb on - strand, within OH686_01880 at 401.601 kb on + strand, within OH686_01880 at 401.601 kb on + strand, within OH686_01880 at 401.601 kb on + strand, within OH686_01880 at 401.601 kb on + strand, within OH686_01880 at 401.601 kb on + strand, within OH686_01880 at 401.602 kb on - strand, within OH686_01880 at 401.602 kb on - strand, within OH686_01880 at 401.602 kb on - strand, within OH686_01880 at 401.602 kb on - strand, within OH686_01880 at 401.602 kb on - strand, within OH686_01880 at 401.602 kb on - strand, within OH686_01880 at 401.629 kb on + strand, within OH686_01880 at 401.629 kb on + strand, within OH686_01880 at 401.629 kb on + strand, within OH686_01880 at 401.629 kb on + strand, within OH686_01880 at 401.629 kb on + strand, within OH686_01880 at 401.629 kb on + strand, within OH686_01880 at 401.629 kb on + strand, within OH686_01880 at 401.629 kb on + strand, within OH686_01880 at 401.629 kb on + strand, within OH686_01880 at 401.629 kb on + strand, within OH686_01880 at 401.629 kb on + strand, within OH686_01880 at 401.629 kb on + strand, within OH686_01880 at 401.629 kb on + strand, within OH686_01880 at 401.629 kb on + strand, within OH686_01880 at 401.629 kb on + strand, within OH686_01880 at 401.629 kb on + strand, within OH686_01880 at 401.629 kb on + strand, within OH686_01880 at 401.629 kb on + strand, within OH686_01880 at 401.629 kb on + strand, within OH686_01880 at 401.630 kb on - strand, within OH686_01880 at 401.630 kb on - strand, within OH686_01880 at 401.630 kb on - strand, within OH686_01880 at 401.630 kb on - strand, within OH686_01880 at 401.630 kb on - strand, within OH686_01880 at 401.630 kb on - strand, within OH686_01880 at 401.630 kb on - strand, within OH686_01880 at 401.630 kb on - strand, within OH686_01880 at 401.630 kb on - strand, within OH686_01880 at 401.630 kb on - strand, within OH686_01880 at 401.630 kb on - strand, within OH686_01880 at 401.630 kb on - strand, within OH686_01880 at 401.630 kb on - strand, within OH686_01880 at 401.630 kb on - strand, within OH686_01880 at 401.630 kb on - strand, within OH686_01880 at 401.630 kb on - strand, within OH686_01880 at 401.733 kb on + strand at 401.733 kb on + strand at 401.733 kb on + strand at 401.734 kb on - strand at 401.734 kb on - strand at 401.734 kb on - strand at 401.734 kb on - strand at 401.874 kb on - strand, within OH686_01885 at 401.874 kb on - strand, within OH686_01885 at 401.976 kb on - strand, within OH686_01885 at 401.976 kb on - strand, within OH686_01885 at 402.152 kb on + strand, within OH686_01885 at 402.152 kb on + strand, within OH686_01885 at 402.152 kb on + strand, within OH686_01885 at 402.152 kb on + strand, within OH686_01885 at 402.152 kb on + strand, within OH686_01885 at 402.152 kb on + strand, within OH686_01885 at 402.152 kb on + strand, within OH686_01885 at 402.152 kb on + strand, within OH686_01885 at 402.152 kb on + strand, within OH686_01885 at 402.153 kb on - strand, within OH686_01885 at 402.153 kb on - strand, within OH686_01885 at 402.153 kb on - strand, within OH686_01885 at 402.153 kb on - strand, within OH686_01885 at 402.153 kb on - strand, within OH686_01885 at 402.153 kb on - strand, within OH686_01885 at 402.153 kb on - strand, within OH686_01885 at 402.153 kb on - strand, within OH686_01885 at 402.153 kb on - strand, within OH686_01885 at 402.153 kb on - strand, within OH686_01885 at 402.153 kb on - strand, within OH686_01885 at 402.153 kb on - strand, within OH686_01885 at 402.153 kb on - strand, within OH686_01885 at 402.369 kb on - strand, within OH686_01885 at 402.462 kb on + strand at 402.463 kb on - strand at 402.491 kb on + strand at 402.491 kb on + strand at 402.491 kb on + strand at 402.491 kb on + strand at 402.491 kb on + strand at 402.491 kb on + strand at 402.492 kb on - strand at 402.492 kb on - strand at 402.492 kb on - strand at 402.492 kb on - strand at 402.542 kb on + strand at 402.574 kb on + strand at 402.574 kb on + strand at 402.575 kb on - strand at 402.575 kb on - strand at 402.639 kb on + strand at 402.639 kb on + strand at 402.640 kb on - strand at 402.640 kb on - strand at 402.646 kb on + strand at 402.646 kb on + strand at 402.646 kb on + strand at 402.646 kb on + strand at 402.646 kb on + strand at 402.646 kb on + strand at 402.646 kb on + strand at 402.647 kb on - strand at 402.647 kb on - strand at 402.647 kb on - strand at 402.647 kb on - strand at 402.647 kb on - strand at 402.710 kb on + strand at 402.710 kb on + strand at 402.710 kb on + strand at 402.710 kb on + strand at 402.710 kb on + strand at 402.710 kb on + strand at 402.710 kb on + strand at 402.710 kb on + strand at 402.710 kb on + strand at 402.710 kb on + strand at 402.711 kb on - strand at 402.711 kb on - strand at 402.711 kb on - strand at 402.825 kb on + strand, within OH686_01890 at 402.825 kb on + strand, within OH686_01890 at 402.825 kb on + strand, within OH686_01890 at 402.826 kb on - strand, within OH686_01890 at 402.826 kb on - strand, within OH686_01890 at 402.826 kb on - strand, within OH686_01890 at 402.826 kb on - strand, within OH686_01890 at 402.826 kb on - strand, within OH686_01890 at 402.826 kb on - strand, within OH686_01890 at 402.826 kb on - strand, within OH686_01890 at 402.826 kb on - strand, within OH686_01890 at 402.867 kb on - strand, within OH686_01890 at 402.911 kb on + strand, within OH686_01890 at 402.911 kb on + strand, within OH686_01890 at 402.911 kb on + strand, within OH686_01890 at 402.911 kb on + strand, within OH686_01890 at 402.912 kb on - strand, within OH686_01890 at 402.912 kb on - strand, within OH686_01890 at 402.912 kb on - strand, within OH686_01890 at 402.912 kb on - strand, within OH686_01890 at 402.992 kb on - strand, within OH686_01890 at 402.993 kb on + strand, within OH686_01890 at 402.993 kb on + strand, within OH686_01890 at 402.993 kb on + strand, within OH686_01890 at 402.993 kb on + strand, within OH686_01890 at 402.993 kb on + strand, within OH686_01890 at 402.993 kb on + strand, within OH686_01890 at 402.993 kb on + strand, within OH686_01890 at 402.993 kb on + strand, within OH686_01890 at 402.994 kb on - strand, within OH686_01890 at 402.994 kb on - strand, within OH686_01890 at 402.994 kb on - strand, within OH686_01890 at 402.994 kb on - strand, within OH686_01890 at 402.994 kb on - strand, within OH686_01890 at 402.994 kb on - strand, within OH686_01890 at 402.994 kb on - strand, within OH686_01890 at 402.994 kb on - strand, within OH686_01890
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 400,797 + -0.4 400,797 + -0.6 400,798 - -0.5 400,798 - +0.4 400,893 + OH686_01880 0.14 -1.0 400,893 + OH686_01880 0.14 +0.1 400,893 + OH686_01880 0.14 +0.2 400,893 + OH686_01880 0.14 -0.6 400,893 + OH686_01880 0.14 -0.1 400,893 + OH686_01880 0.14 -0.7 400,893 + OH686_01880 0.14 +0.1 400,893 + OH686_01880 0.14 -0.6 400,893 + OH686_01880 0.14 -0.1 400,894 - OH686_01880 0.14 +0.7 400,894 - OH686_01880 0.14 +0.4 400,894 - OH686_01880 0.14 -0.7 400,894 - OH686_01880 0.14 -0.5 400,894 - OH686_01880 0.14 +0.5 400,894 - OH686_01880 0.14 +0.0 400,894 - OH686_01880 0.14 +0.1 400,944 + OH686_01880 0.19 -0.2 400,944 + OH686_01880 0.19 -0.6 400,944 + OH686_01880 0.19 +0.6 400,945 - OH686_01880 0.20 -0.6 400,945 - OH686_01880 0.20 +0.8 401,029 + OH686_01880 0.28 +0.4 401,030 - OH686_01880 0.28 +0.1 401,030 - OH686_01880 0.28 +0.6 401,068 - OH686_01880 0.32 +0.1 401,068 - OH686_01880 0.32 +0.5 401,304 + OH686_01880 0.55 -0.6 401,304 + OH686_01880 0.55 +0.6 401,304 + OH686_01880 0.55 +0.4 401,304 + OH686_01880 0.55 +1.0 401,304 + OH686_01880 0.55 -0.4 401,305 - OH686_01880 0.55 -0.1 401,305 - OH686_01880 0.55 -0.4 401,305 - OH686_01880 0.55 -0.2 401,305 - OH686_01880 0.55 -0.5 401,305 - OH686_01880 0.55 -0.0 401,601 + OH686_01880 0.85 +1.0 401,601 + OH686_01880 0.85 -0.2 401,601 + OH686_01880 0.85 +0.3 401,601 + OH686_01880 0.85 +0.0 401,601 + OH686_01880 0.85 +0.8 401,602 - OH686_01880 0.85 -0.2 401,602 - OH686_01880 0.85 +1.0 401,602 - OH686_01880 0.85 +0.9 401,602 - OH686_01880 0.85 -0.6 401,602 - OH686_01880 0.85 -0.4 401,602 - OH686_01880 0.85 -0.4 401,629 + OH686_01880 0.88 -0.1 401,629 + OH686_01880 0.88 +0.5 401,629 + OH686_01880 0.88 +0.5 401,629 + OH686_01880 0.88 +0.1 401,629 + OH686_01880 0.88 +0.4 401,629 + OH686_01880 0.88 -0.6 401,629 + OH686_01880 0.88 -0.9 401,629 + OH686_01880 0.88 -1.0 401,629 + OH686_01880 0.88 -0.3 401,629 + OH686_01880 0.88 +1.5 401,629 + OH686_01880 0.88 +0.6 401,629 + OH686_01880 0.88 +0.6 401,629 + OH686_01880 0.88 -0.0 401,629 + OH686_01880 0.88 +0.3 401,629 + OH686_01880 0.88 -0.3 401,629 + OH686_01880 0.88 -0.0 401,629 + OH686_01880 0.88 +0.1 401,629 + OH686_01880 0.88 -0.0 401,629 + OH686_01880 0.88 -0.6 401,630 - OH686_01880 0.88 +0.1 401,630 - OH686_01880 0.88 +0.8 401,630 - OH686_01880 0.88 -0.2 401,630 - OH686_01880 0.88 +0.3 401,630 - OH686_01880 0.88 -1.3 401,630 - OH686_01880 0.88 -0.2 401,630 - OH686_01880 0.88 -0.3 401,630 - OH686_01880 0.88 +0.5 401,630 - OH686_01880 0.88 -1.2 401,630 - OH686_01880 0.88 +0.4 401,630 - OH686_01880 0.88 -0.6 401,630 - OH686_01880 0.88 +0.4 401,630 - OH686_01880 0.88 -0.0 401,630 - OH686_01880 0.88 +0.3 401,630 - OH686_01880 0.88 +0.4 401,630 - OH686_01880 0.88 -0.7 401,733 + -0.2 401,733 + +0.0 401,733 + +0.3 401,734 - -0.5 401,734 - +0.2 401,734 - -0.1 401,734 - -0.2 401,874 - OH686_01885 0.16 +0.2 401,874 - OH686_01885 0.16 +0.5 401,976 - OH686_01885 0.31 +0.6 401,976 - OH686_01885 0.31 -0.4 402,152 + OH686_01885 0.56 +0.0 402,152 + OH686_01885 0.56 +0.7 402,152 + OH686_01885 0.56 -0.6 402,152 + OH686_01885 0.56 +0.4 402,152 + OH686_01885 0.56 -0.4 402,152 + OH686_01885 0.56 +0.0 402,152 + OH686_01885 0.56 +0.1 402,152 + OH686_01885 0.56 +0.3 402,152 + OH686_01885 0.56 +0.2 402,153 - OH686_01885 0.56 +0.8 402,153 - OH686_01885 0.56 -0.0 402,153 - OH686_01885 0.56 -0.1 402,153 - OH686_01885 0.56 +1.3 402,153 - OH686_01885 0.56 -0.1 402,153 - OH686_01885 0.56 -0.3 402,153 - OH686_01885 0.56 +1.5 402,153 - OH686_01885 0.56 -1.0 402,153 - OH686_01885 0.56 +0.4 402,153 - OH686_01885 0.56 -0.1 402,153 - OH686_01885 0.56 +0.6 402,153 - OH686_01885 0.56 +1.0 402,153 - OH686_01885 0.56 +0.6 402,369 - OH686_01885 0.87 -0.6 402,462 + -0.0 402,463 - -0.6 402,491 + -0.4 402,491 + -0.3 402,491 + +1.2 402,491 + -0.4 402,491 + +0.4 402,491 + +1.2 402,492 - -0.6 402,492 - -1.2 402,492 - +0.6 402,492 - -0.9 402,542 + -0.1 402,574 + -0.9 402,574 + +0.6 402,575 - +0.2 402,575 - +0.3 402,639 + +0.8 402,639 + +0.8 402,640 - +0.2 402,640 - -0.2 402,646 + -0.5 402,646 + +0.4 402,646 + +0.5 402,646 + -0.1 402,646 + +0.4 402,646 + +1.2 402,646 + +0.3 402,647 - -0.4 402,647 - -0.3 402,647 - -0.3 402,647 - -0.6 402,647 - +0.0 402,710 + +0.2 402,710 + +0.4 402,710 + +0.6 402,710 + +1.6 402,710 + +0.2 402,710 + -0.4 402,710 + +0.2 402,710 + -0.4 402,710 + -0.1 402,710 + -0.1 402,711 - -0.1 402,711 - -0.0 402,711 - -0.6 402,825 + OH686_01890 0.14 +0.5 402,825 + OH686_01890 0.14 -0.1 402,825 + OH686_01890 0.14 -0.2 402,826 - OH686_01890 0.14 -0.6 402,826 - OH686_01890 0.14 -0.0 402,826 - OH686_01890 0.14 -0.2 402,826 - OH686_01890 0.14 +0.1 402,826 - OH686_01890 0.14 +0.1 402,826 - OH686_01890 0.14 +0.4 402,826 - OH686_01890 0.14 -0.0 402,826 - OH686_01890 0.14 -0.5 402,867 - OH686_01890 0.15 +0.0 402,911 + OH686_01890 0.17 +0.3 402,911 + OH686_01890 0.17 -0.5 402,911 + OH686_01890 0.17 +0.8 402,911 + OH686_01890 0.17 +1.0 402,912 - OH686_01890 0.17 -0.6 402,912 - OH686_01890 0.17 -0.8 402,912 - OH686_01890 0.17 +0.1 402,912 - OH686_01890 0.17 +0.0 402,992 - OH686_01890 0.20 -1.6 402,993 + OH686_01890 0.20 +0.1 402,993 + OH686_01890 0.20 +0.2 402,993 + OH686_01890 0.20 -0.2 402,993 + OH686_01890 0.20 -0.6 402,993 + OH686_01890 0.20 -0.2 402,993 + OH686_01890 0.20 -0.1 402,993 + OH686_01890 0.20 -0.3 402,993 + OH686_01890 0.20 -0.1 402,994 - OH686_01890 0.20 -1.4 402,994 - OH686_01890 0.20 +0.2 402,994 - OH686_01890 0.20 -0.3 402,994 - OH686_01890 0.20 -0.1 402,994 - OH686_01890 0.20 -0.0 402,994 - OH686_01890 0.20 +0.5 402,994 - OH686_01890 0.20 +0.4 402,994 - OH686_01890 0.20 -0.0
Or see this region's nucleotide sequence