Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_00175 and OH686_00180 overlap by 4 nucleotides OH686_00180 and OH686_00185 are separated by 10 nucleotides OH686_00185 and OH686_00190 overlap by 8 nucleotides
OH686_00175: OH686_00175 - Type II secretory pathway, component PulD, at 36,150 to 36,959
_00175
OH686_00180: OH686_00180 - hypothetical protein, at 36,956 to 37,588
_00180
OH686_00185: OH686_00185 - GNAT family acetyltransferase YjcF, at 37,599 to 38,024
_00185
OH686_00190: OH686_00190 - hypothetical protein, at 38,017 to 39,183
_00190
Position (kb) 37
38
39 Strain fitness (log2 ratio) -2
-1
0
1 at 36.732 kb on - strand, within OH686_00175 at 36.805 kb on + strand, within OH686_00175 at 36.805 kb on + strand, within OH686_00175 at 36.805 kb on + strand, within OH686_00175 at 36.805 kb on + strand, within OH686_00175 at 36.806 kb on - strand, within OH686_00175 at 36.806 kb on - strand, within OH686_00175 at 36.806 kb on - strand, within OH686_00175 at 36.806 kb on - strand, within OH686_00175 at 36.806 kb on - strand, within OH686_00175 at 36.806 kb on - strand, within OH686_00175 at 36.855 kb on + strand, within OH686_00175 at 36.855 kb on + strand, within OH686_00175 at 36.855 kb on + strand, within OH686_00175 at 36.855 kb on + strand, within OH686_00175 at 36.855 kb on + strand, within OH686_00175 at 36.855 kb on + strand, within OH686_00175 at 36.856 kb on - strand, within OH686_00175 at 36.856 kb on - strand, within OH686_00175 at 36.856 kb on - strand, within OH686_00175 at 36.856 kb on - strand, within OH686_00175 at 36.874 kb on + strand, within OH686_00175 at 36.875 kb on - strand, within OH686_00175 at 36.875 kb on - strand, within OH686_00175 at 36.875 kb on - strand, within OH686_00175 at 36.959 kb on + strand at 36.959 kb on + strand at 36.959 kb on + strand at 36.959 kb on + strand at 36.959 kb on + strand at 36.959 kb on + strand at 36.960 kb on - strand at 36.960 kb on - strand at 36.960 kb on - strand at 36.960 kb on - strand at 36.960 kb on - strand at 36.960 kb on - strand at 36.960 kb on - strand at 36.960 kb on - strand at 36.960 kb on - strand at 36.960 kb on - strand at 37.053 kb on + strand, within OH686_00180 at 37.053 kb on + strand, within OH686_00180 at 37.053 kb on + strand, within OH686_00180 at 37.053 kb on + strand, within OH686_00180 at 37.053 kb on + strand, within OH686_00180 at 37.053 kb on + strand, within OH686_00180 at 37.054 kb on - strand, within OH686_00180 at 37.054 kb on - strand, within OH686_00180 at 37.054 kb on - strand, within OH686_00180 at 37.054 kb on - strand, within OH686_00180 at 37.054 kb on - strand, within OH686_00180 at 37.054 kb on - strand, within OH686_00180 at 37.054 kb on - strand, within OH686_00180 at 37.054 kb on - strand, within OH686_00180 at 37.062 kb on + strand, within OH686_00180 at 37.062 kb on + strand, within OH686_00180 at 37.063 kb on - strand, within OH686_00180 at 37.063 kb on - strand, within OH686_00180 at 37.071 kb on + strand, within OH686_00180 at 37.071 kb on + strand, within OH686_00180 at 37.071 kb on + strand, within OH686_00180 at 37.071 kb on + strand, within OH686_00180 at 37.071 kb on + strand, within OH686_00180 at 37.072 kb on - strand, within OH686_00180 at 37.072 kb on - strand, within OH686_00180 at 37.072 kb on - strand, within OH686_00180 at 37.072 kb on - strand, within OH686_00180 at 37.122 kb on + strand, within OH686_00180 at 37.122 kb on + strand, within OH686_00180 at 37.123 kb on - strand, within OH686_00180 at 37.123 kb on - strand, within OH686_00180 at 37.165 kb on + strand, within OH686_00180 at 37.165 kb on + strand, within OH686_00180 at 37.165 kb on + strand, within OH686_00180 at 37.166 kb on - strand, within OH686_00180 at 37.166 kb on - strand, within OH686_00180 at 37.166 kb on - strand, within OH686_00180 at 37.317 kb on + strand, within OH686_00180 at 37.317 kb on + strand, within OH686_00180 at 37.317 kb on + strand, within OH686_00180 at 37.318 kb on - strand, within OH686_00180 at 37.318 kb on - strand, within OH686_00180 at 37.318 kb on - strand, within OH686_00180 at 37.318 kb on - strand, within OH686_00180 at 37.344 kb on + strand, within OH686_00180 at 37.344 kb on + strand, within OH686_00180 at 37.344 kb on + strand, within OH686_00180 at 37.344 kb on + strand, within OH686_00180 at 37.344 kb on + strand, within OH686_00180 at 37.344 kb on + strand, within OH686_00180 at 37.344 kb on + strand, within OH686_00180 at 37.345 kb on - strand, within OH686_00180 at 37.345 kb on - strand, within OH686_00180 at 37.345 kb on - strand, within OH686_00180 at 37.600 kb on + strand at 37.600 kb on + strand at 37.600 kb on + strand at 37.601 kb on - strand at 37.601 kb on - strand at 37.601 kb on - strand at 37.623 kb on + strand at 37.623 kb on + strand at 37.623 kb on + strand at 37.623 kb on + strand at 37.623 kb on + strand at 37.623 kb on + strand at 37.623 kb on + strand at 37.623 kb on + strand at 37.623 kb on + strand at 37.623 kb on + strand at 37.623 kb on + strand at 37.623 kb on + strand at 37.624 kb on - strand at 37.624 kb on - strand at 37.624 kb on - strand at 37.624 kb on - strand at 37.624 kb on - strand at 37.624 kb on - strand at 37.624 kb on - strand at 37.624 kb on - strand at 37.624 kb on - strand at 37.624 kb on - strand at 37.624 kb on - strand at 37.624 kb on - strand at 37.648 kb on + strand, within OH686_00185 at 37.649 kb on - strand, within OH686_00185 at 37.684 kb on + strand, within OH686_00185 at 37.684 kb on + strand, within OH686_00185 at 37.684 kb on + strand, within OH686_00185 at 37.684 kb on + strand, within OH686_00185 at 37.684 kb on + strand, within OH686_00185 at 37.685 kb on - strand, within OH686_00185 at 37.685 kb on - strand, within OH686_00185 at 37.685 kb on - strand, within OH686_00185 at 37.685 kb on - strand, within OH686_00185 at 37.685 kb on - strand, within OH686_00185 at 37.685 kb on - strand, within OH686_00185 at 37.727 kb on - strand, within OH686_00185 at 37.727 kb on - strand, within OH686_00185 at 37.861 kb on + strand, within OH686_00185 at 38.772 kb on - strand, within OH686_00190
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 36,732 - OH686_00175 0.72 -0.0 36,805 + OH686_00175 0.81 -0.3 36,805 + OH686_00175 0.81 -0.4 36,805 + OH686_00175 0.81 +0.2 36,805 + OH686_00175 0.81 +0.7 36,806 - OH686_00175 0.81 +0.1 36,806 - OH686_00175 0.81 +0.2 36,806 - OH686_00175 0.81 +0.6 36,806 - OH686_00175 0.81 -0.2 36,806 - OH686_00175 0.81 -0.9 36,806 - OH686_00175 0.81 -0.3 36,855 + OH686_00175 0.87 +0.1 36,855 + OH686_00175 0.87 +0.2 36,855 + OH686_00175 0.87 +0.5 36,855 + OH686_00175 0.87 -0.5 36,855 + OH686_00175 0.87 +0.2 36,855 + OH686_00175 0.87 +0.2 36,856 - OH686_00175 0.87 -0.2 36,856 - OH686_00175 0.87 +0.2 36,856 - OH686_00175 0.87 +0.5 36,856 - OH686_00175 0.87 +0.5 36,874 + OH686_00175 0.89 +0.1 36,875 - OH686_00175 0.90 +1.0 36,875 - OH686_00175 0.90 -0.1 36,875 - OH686_00175 0.90 +0.4 36,959 + +1.4 36,959 + +0.9 36,959 + +0.4 36,959 + +1.0 36,959 + +0.8 36,959 + +0.6 36,960 - +0.3 36,960 - -0.0 36,960 - +0.6 36,960 - -1.4 36,960 - +0.1 36,960 - +0.1 36,960 - -0.3 36,960 - -0.1 36,960 - +1.1 36,960 - -0.1 37,053 + OH686_00180 0.15 +0.3 37,053 + OH686_00180 0.15 +0.7 37,053 + OH686_00180 0.15 +0.3 37,053 + OH686_00180 0.15 -0.6 37,053 + OH686_00180 0.15 -1.2 37,053 + OH686_00180 0.15 -0.2 37,054 - OH686_00180 0.15 +1.3 37,054 - OH686_00180 0.15 -0.5 37,054 - OH686_00180 0.15 +0.2 37,054 - OH686_00180 0.15 -0.9 37,054 - OH686_00180 0.15 -1.3 37,054 - OH686_00180 0.15 +0.5 37,054 - OH686_00180 0.15 +0.1 37,054 - OH686_00180 0.15 +0.0 37,062 + OH686_00180 0.17 +0.4 37,062 + OH686_00180 0.17 +0.6 37,063 - OH686_00180 0.17 +0.1 37,063 - OH686_00180 0.17 -0.5 37,071 + OH686_00180 0.18 +0.4 37,071 + OH686_00180 0.18 +1.5 37,071 + OH686_00180 0.18 +0.3 37,071 + OH686_00180 0.18 +0.2 37,071 + OH686_00180 0.18 +0.4 37,072 - OH686_00180 0.18 -0.1 37,072 - OH686_00180 0.18 -0.2 37,072 - OH686_00180 0.18 +1.1 37,072 - OH686_00180 0.18 -0.1 37,122 + OH686_00180 0.26 +0.6 37,122 + OH686_00180 0.26 -0.0 37,123 - OH686_00180 0.26 +0.3 37,123 - OH686_00180 0.26 +0.0 37,165 + OH686_00180 0.33 +0.1 37,165 + OH686_00180 0.33 +0.1 37,165 + OH686_00180 0.33 +0.4 37,166 - OH686_00180 0.33 +0.6 37,166 - OH686_00180 0.33 +0.8 37,166 - OH686_00180 0.33 -1.0 37,317 + OH686_00180 0.57 +0.3 37,317 + OH686_00180 0.57 +0.6 37,317 + OH686_00180 0.57 -0.7 37,318 - OH686_00180 0.57 +0.2 37,318 - OH686_00180 0.57 -1.5 37,318 - OH686_00180 0.57 -0.5 37,318 - OH686_00180 0.57 +0.2 37,344 + OH686_00180 0.61 -0.7 37,344 + OH686_00180 0.61 -0.7 37,344 + OH686_00180 0.61 +0.6 37,344 + OH686_00180 0.61 +1.3 37,344 + OH686_00180 0.61 -0.4 37,344 + OH686_00180 0.61 +0.4 37,344 + OH686_00180 0.61 +0.6 37,345 - OH686_00180 0.61 -0.2 37,345 - OH686_00180 0.61 +0.3 37,345 - OH686_00180 0.61 -0.1 37,600 + +0.8 37,600 + -0.6 37,600 + +1.1 37,601 - +0.5 37,601 - -0.5 37,601 - -0.2 37,623 + -0.7 37,623 + -1.2 37,623 + +0.1 37,623 + -0.3 37,623 + -0.3 37,623 + +0.6 37,623 + -0.1 37,623 + -0.3 37,623 + +0.8 37,623 + -0.1 37,623 + -0.4 37,623 + -1.9 37,624 - +1.0 37,624 - +0.0 37,624 - +0.6 37,624 - +0.5 37,624 - +1.2 37,624 - -0.6 37,624 - -0.1 37,624 - -0.3 37,624 - +0.9 37,624 - +0.1 37,624 - -1.1 37,624 - -0.4 37,648 + OH686_00185 0.12 -1.0 37,649 - OH686_00185 0.12 -1.6 37,684 + OH686_00185 0.20 +1.4 37,684 + OH686_00185 0.20 +0.4 37,684 + OH686_00185 0.20 +0.7 37,684 + OH686_00185 0.20 -0.3 37,684 + OH686_00185 0.20 +0.1 37,685 - OH686_00185 0.20 +0.6 37,685 - OH686_00185 0.20 -0.0 37,685 - OH686_00185 0.20 +0.5 37,685 - OH686_00185 0.20 -0.0 37,685 - OH686_00185 0.20 +0.5 37,685 - OH686_00185 0.20 -0.1 37,727 - OH686_00185 0.30 -0.8 37,727 - OH686_00185 0.30 +0.6 37,861 + OH686_00185 0.62 +0.6 38,772 - OH686_00190 0.65 -0.5
Or see this region's nucleotide sequence