Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03993

Experiment: PYE with Dimethyl Sulfoxide 0.4 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 vol%
3,719,405	+				-0.3
3,719,418	+				-0.3
3,719,443	+				-1.2
3,719,451	-				+0.8
3,719,498	+		CCNA_03564	0.25	+0.1
3,719,498	+		CCNA_03564	0.25	-1.1
3,719,502	+		CCNA_03564	0.27	-0.8
3,719,510	-		CCNA_03564	0.30	+0.1
3,719,510	-		CCNA_03564	0.30	-0.5
3,719,510	-		CCNA_03564	0.30	-0.4
3,719,519	+		CCNA_03564	0.34	-0.9
3,719,544	+		CCNA_03564	0.44	+0.9
3,719,544	+		CCNA_03564	0.44	-0.1
3,719,573	+		CCNA_03564	0.56	-0.8
3,719,581	-		CCNA_03564	0.60	-0.2
3,719,598	-		CCNA_03564	0.67	+0.2
3,719,631	+		CCNA_03564	0.80	+0.5
3,719,631	+		CCNA_03564	0.80	-0.9
3,719,631	+		CCNA_03564	0.80	+0.6
3,719,763	+				+1.0
3,719,778	+				+0.1
3,719,809	-				+1.7
3,719,811	+				-0.1
3,719,817	+				-2.1
3,719,819	-				-0.0
3,719,872	+		CCNA_03565	0.13	-1.6
3,719,875	-		CCNA_03565	0.14	+0.6
3,719,880	-		CCNA_03565	0.15	+0.3
3,719,929	-		CCNA_03565	0.30	+0.4
3,719,975	+		CCNA_03565	0.44	-0.0
3,719,975	+		CCNA_03565	0.44	+0.9
3,719,975	+		CCNA_03565	0.44	-1.4
3,719,975	+		CCNA_03565	0.44	-0.3
3,719,983	-		CCNA_03565	0.47	-0.6
3,720,001	-		CCNA_03565	0.52	-0.9
3,720,041	-		CCNA_03565	0.65	+0.8
3,720,041	-		CCNA_03565	0.65	+0.0
3,720,059	+		CCNA_03565	0.70	-0.2
3,720,059	+		CCNA_03565	0.70	-0.7
3,720,067	-		CCNA_03565	0.73	-0.3
3,720,086	+		CCNA_03565	0.79	-1.2
3,720,099	-		CCNA_03565	0.83	+0.1
3,720,140	-				+1.2
3,720,169	+				-1.9
3,720,180	+				-0.3
3,720,180	+				-0.5
3,720,209	-				-0.3
3,720,209	-				+0.5
3,720,221	-				-0.6
3,720,235	-				+0.3
3,720,385	-				-0.0
3,720,385	-				-0.2
3,720,406	-				+0.6
3,720,406	-				+0.6
3,720,406	-				-0.1
3,720,419	-				-0.7
3,720,422	+				-0.2
3,720,434	+				-1.2
3,720,434	+				-0.4
3,720,454	+		CCNA_03993	0.13	+0.9
3,720,454	+		CCNA_03993	0.13	+0.4
3,720,462	-		CCNA_03993	0.15	-0.1
3,720,565	+		CCNA_03993	0.40	+0.1
3,720,565	+		CCNA_03993	0.40	+0.4
3,720,608	+		CCNA_03993	0.50	+0.2
3,720,616	-		CCNA_03993	0.52	+0.0
3,720,630	-		CCNA_03993	0.55	+0.6
3,720,630	-		CCNA_03993	0.55	+0.5
3,720,643	+		CCNA_03993	0.58	-0.4
3,720,833	+				+0.8
3,720,833	+				-0.4
3,720,841	-				-0.1
3,720,846	-				+0.2
3,720,860	+				+0.2
3,720,860	+				+0.2
3,720,860	+				+0.6
3,720,868	-				-0.8
3,720,884	+				-2.0
3,720,892	-				+0.5
3,720,920	+				-0.0
3,720,928	-				-0.8
3,720,948	+				-1.7
3,720,991	+				-0.8
3,720,999	-				-1.1
3,721,009	-				+0.0
3,721,061	-				+0.8
3,721,063	+				+1.2
3,721,085	+		CCNA_03567	0.10	-0.6
3,721,085	+		CCNA_03567	0.10	-0.7
3,721,093	-		CCNA_03567	0.11	-1.1
3,721,093	-		CCNA_03567	0.11	-0.3
3,721,093	-		CCNA_03567	0.11	-0.3
3,721,110	+		CCNA_03567	0.12	+0.5
3,721,193	+		CCNA_03567	0.19	+0.6
3,721,193	+		CCNA_03567	0.19	-0.7
3,721,193	+		CCNA_03567	0.19	-1.2
3,721,193	+		CCNA_03567	0.19	-0.2
3,721,193	+		CCNA_03567	0.19	-0.3
3,721,193	+		CCNA_03567	0.19	-1.0
3,721,201	-		CCNA_03567	0.19	+0.1
3,721,201	-		CCNA_03567	0.19	-2.4
3,721,214	+		CCNA_03567	0.20	-0.3
3,721,219	+		CCNA_03567	0.20	-0.2
3,721,227	-		CCNA_03567	0.21	+0.1
3,721,227	-		CCNA_03567	0.21	-0.4
3,721,227	-		CCNA_03567	0.21	-0.2
3,721,266	+		CCNA_03567	0.24	+0.0
3,721,267	+		CCNA_03567	0.24	-0.3
3,721,267	+		CCNA_03567	0.24	-2.1
3,721,267	+		CCNA_03567	0.24	+0.2
3,721,274	-		CCNA_03567	0.25	-0.3
3,721,285	-		CCNA_03567	0.26	-0.1
3,721,408	+		CCNA_03567	0.35	+0.6
3,721,408	+		CCNA_03567	0.35	-0.1
3,721,408	+		CCNA_03567	0.35	+1.1
3,721,416	-		CCNA_03567	0.36	-1.8
3,721,416	-		CCNA_03567	0.36	-0.0
3,721,416	-		CCNA_03567	0.36	-0.5
3,721,416	-		CCNA_03567	0.36	-0.3
3,721,416	-		CCNA_03567	0.36	-0.4
3,721,418	+		CCNA_03567	0.36	+0.1
3,721,426	-		CCNA_03567	0.36	-0.7
3,721,447	+		CCNA_03567	0.38	-0.6
3,721,451	+		CCNA_03567	0.38	+0.5
3,721,451	+		CCNA_03567	0.38	-1.4
3,721,459	-		CCNA_03567	0.39	-1.5
3,721,517	+		CCNA_03567	0.43	-0.9
3,721,539	-		CCNA_03567	0.45	+0.3
3,721,550	-		CCNA_03567	0.46	+1.6
3,721,575	+		CCNA_03567	0.48	-0.4
3,721,575	+		CCNA_03567	0.48	-1.2
3,721,580	+		CCNA_03567	0.48	-0.8
3,721,582	+		CCNA_03567	0.48	+1.1
3,721,584	+		CCNA_03567	0.48	+0.1
3,721,603	+		CCNA_03567	0.50	-0.2
3,721,609	+		CCNA_03567	0.50	-1.0
3,721,614	+		CCNA_03567	0.51	+0.7
3,721,617	-		CCNA_03567	0.51	-0.3
3,721,617	-		CCNA_03567	0.51	+0.2
3,721,652	+		CCNA_03567	0.54	-0.3
3,721,653	+		CCNA_03567	0.54	-0.8
3,721,655	-		CCNA_03567	0.54	+0.2
3,721,659	+		CCNA_03567	0.54	-0.5
3,721,661	-		CCNA_03567	0.54	-0.4
3,721,663	+		CCNA_03567	0.54	+0.1
3,721,702	-		CCNA_03567	0.57	-0.9
3,721,710	+		CCNA_03567	0.58	-0.9
3,721,710	+		CCNA_03567	0.58	-0.2
3,721,718	-		CCNA_03567	0.59	+0.5
3,721,746	+		CCNA_03567	0.61	-1.1
3,721,749	-		CCNA_03567	0.61	+0.5
3,721,753	+		CCNA_03567	0.61	+0.0
3,721,755	-		CCNA_03567	0.61	+1.9
3,721,758	+		CCNA_03567	0.62	-1.0
3,721,758	+		CCNA_03567	0.62	-0.5
3,721,766	-		CCNA_03567	0.62	+0.6
3,721,766	-		CCNA_03567	0.62	-0.3
3,721,805	-		CCNA_03567	0.65	-0.3
3,721,815	+		CCNA_03567	0.66	-0.3