Experiment: PYE with Dimethyl Sulfoxide 0.4 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_03793 and CCNA_03794 are separated by 91 nucleotides CCNA_03794 and CCNA_03795 are separated by 226 nucleotides CCNA_03795 and CCNA_03796 are separated by 288 nucleotides
CCNA_03793: CCNA_03793 - cell division protein FtsY, at 3,956,890 to 3,957,831
_03793
CCNA_03794: CCNA_03794 - hypothetical protein, at 3,957,923 to 3,958,573
_03794
CCNA_03795: CCNA_03795 - tellurium resistance protein terB, at 3,958,800 to 3,959,258
_03795
CCNA_03796: CCNA_03796 - tellurium resistance protein terC, at 3,959,547 to 3,960,557
_03796
Position (kb)
3957
3958
3959 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3957.840 kb on + strand at 3957.868 kb on - strand at 3957.879 kb on + strand at 3957.886 kb on + strand at 3957.894 kb on - strand at 3957.894 kb on - strand at 3957.894 kb on - strand at 3957.920 kb on + strand at 3957.929 kb on - strand at 3957.941 kb on - strand at 3957.942 kb on - strand at 3957.953 kb on + strand at 3957.988 kb on + strand, within CCNA_03794 at 3958.021 kb on + strand, within CCNA_03794 at 3958.067 kb on + strand, within CCNA_03794 at 3958.114 kb on + strand, within CCNA_03794 at 3958.139 kb on + strand, within CCNA_03794 at 3958.147 kb on - strand, within CCNA_03794 at 3958.147 kb on - strand, within CCNA_03794 at 3958.206 kb on - strand, within CCNA_03794 at 3958.210 kb on + strand, within CCNA_03794 at 3958.210 kb on + strand, within CCNA_03794 at 3958.210 kb on + strand, within CCNA_03794 at 3958.215 kb on + strand, within CCNA_03794 at 3958.218 kb on - strand, within CCNA_03794 at 3958.218 kb on - strand, within CCNA_03794 at 3958.218 kb on - strand, within CCNA_03794 at 3958.296 kb on - strand, within CCNA_03794 at 3958.305 kb on - strand, within CCNA_03794 at 3958.366 kb on - strand, within CCNA_03794 at 3958.435 kb on - strand, within CCNA_03794 at 3958.443 kb on - strand, within CCNA_03794 at 3958.443 kb on - strand, within CCNA_03794 at 3958.463 kb on - strand, within CCNA_03794 at 3958.485 kb on + strand, within CCNA_03794 at 3958.493 kb on - strand, within CCNA_03794 at 3958.518 kb on + strand at 3958.526 kb on + strand at 3958.534 kb on - strand at 3958.551 kb on - strand at 3958.558 kb on - strand at 3958.590 kb on - strand at 3958.600 kb on + strand at 3958.600 kb on + strand at 3958.601 kb on + strand at 3958.608 kb on + strand at 3958.609 kb on - strand at 3958.609 kb on - strand at 3958.631 kb on + strand at 3958.666 kb on - strand at 3958.743 kb on + strand at 3958.751 kb on - strand at 3958.751 kb on - strand at 3958.751 kb on - strand at 3958.759 kb on + strand at 3958.772 kb on - strand at 3958.782 kb on + strand at 3958.782 kb on + strand at 3958.784 kb on + strand at 3958.790 kb on - strand at 3958.792 kb on + strand at 3958.792 kb on + strand at 3958.800 kb on - strand at 3958.800 kb on - strand at 3958.827 kb on + strand at 3958.861 kb on + strand, within CCNA_03795 at 3958.871 kb on + strand, within CCNA_03795 at 3958.879 kb on - strand, within CCNA_03795 at 3958.927 kb on + strand, within CCNA_03795 at 3958.935 kb on - strand, within CCNA_03795 at 3958.956 kb on + strand, within CCNA_03795 at 3958.974 kb on - strand, within CCNA_03795 at 3959.010 kb on - strand, within CCNA_03795 at 3959.010 kb on - strand, within CCNA_03795 at 3959.051 kb on - strand, within CCNA_03795 at 3959.120 kb on + strand, within CCNA_03795 at 3959.213 kb on - strand at 3959.215 kb on + strand at 3959.218 kb on - strand at 3959.225 kb on + strand at 3959.233 kb on - strand at 3959.233 kb on - strand at 3959.268 kb on + strand at 3959.347 kb on - strand at 3959.347 kb on - strand at 3959.383 kb on + strand at 3959.396 kb on - strand at 3959.404 kb on + strand at 3959.443 kb on + strand at 3959.451 kb on - strand at 3959.456 kb on - strand at 3959.481 kb on + strand at 3959.481 kb on + strand at 3959.489 kb on - strand at 3959.490 kb on - strand at 3959.502 kb on + strand at 3959.502 kb on + strand at 3959.527 kb on + strand at 3959.565 kb on + strand at 3959.573 kb on - strand at 3959.573 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction PYE with Dimethyl Sulfoxide 0.4 vol% remove 3,957,840 + -1.4 3,957,868 - +0.8 3,957,879 + +0.6 3,957,886 + -0.5 3,957,894 - -0.4 3,957,894 - -0.1 3,957,894 - +0.4 3,957,920 + +0.5 3,957,929 - -0.4 3,957,941 - -0.2 3,957,942 - -0.1 3,957,953 + -0.8 3,957,988 + CCNA_03794 0.10 -1.1 3,958,021 + CCNA_03794 0.15 -0.1 3,958,067 + CCNA_03794 0.22 +0.7 3,958,114 + CCNA_03794 0.29 -0.7 3,958,139 + CCNA_03794 0.33 +0.5 3,958,147 - CCNA_03794 0.34 +2.4 3,958,147 - CCNA_03794 0.34 -1.0 3,958,206 - CCNA_03794 0.43 -0.2 3,958,210 + CCNA_03794 0.44 -0.6 3,958,210 + CCNA_03794 0.44 +0.1 3,958,210 + CCNA_03794 0.44 +0.2 3,958,215 + CCNA_03794 0.45 +0.2 3,958,218 - CCNA_03794 0.45 -0.7 3,958,218 - CCNA_03794 0.45 -0.4 3,958,218 - CCNA_03794 0.45 -1.0 3,958,296 - CCNA_03794 0.57 -0.2 3,958,305 - CCNA_03794 0.59 -1.0 3,958,366 - CCNA_03794 0.68 -0.4 3,958,435 - CCNA_03794 0.79 -0.4 3,958,443 - CCNA_03794 0.80 -1.0 3,958,443 - CCNA_03794 0.80 +0.7 3,958,463 - CCNA_03794 0.83 +0.3 3,958,485 + CCNA_03794 0.86 -1.0 3,958,493 - CCNA_03794 0.88 +0.1 3,958,518 + +0.0 3,958,526 + -0.2 3,958,534 - -1.7 3,958,551 - +0.1 3,958,558 - -1.4 3,958,590 - -0.9 3,958,600 + +0.9 3,958,600 + +0.4 3,958,601 + -0.2 3,958,608 + +0.1 3,958,609 - -0.1 3,958,609 - -0.9 3,958,631 + +0.3 3,958,666 - -0.8 3,958,743 + +0.2 3,958,751 - +0.5 3,958,751 - -0.8 3,958,751 - -2.1 3,958,759 + +0.1 3,958,772 - -0.1 3,958,782 + +0.0 3,958,782 + +0.1 3,958,784 + -0.1 3,958,790 - +0.1 3,958,792 + -0.9 3,958,792 + +0.9 3,958,800 - -0.4 3,958,800 - -1.1 3,958,827 + -0.2 3,958,861 + CCNA_03795 0.13 -0.2 3,958,871 + CCNA_03795 0.15 +0.2 3,958,879 - CCNA_03795 0.17 -0.5 3,958,927 + CCNA_03795 0.28 +0.8 3,958,935 - CCNA_03795 0.29 -0.2 3,958,956 + CCNA_03795 0.34 +0.4 3,958,974 - CCNA_03795 0.38 +0.1 3,959,010 - CCNA_03795 0.46 -2.0 3,959,010 - CCNA_03795 0.46 +0.7 3,959,051 - CCNA_03795 0.55 -0.9 3,959,120 + CCNA_03795 0.70 +0.3 3,959,213 - +0.3 3,959,215 + +0.6 3,959,218 - -1.0 3,959,225 + +0.1 3,959,233 - +0.1 3,959,233 - +0.1 3,959,268 + -0.3 3,959,347 - +0.4 3,959,347 - -0.1 3,959,383 + +0.6 3,959,396 - +0.1 3,959,404 + -0.6 3,959,443 + +0.6 3,959,451 - +0.3 3,959,456 - -0.7 3,959,481 + -0.4 3,959,481 + -0.4 3,959,489 - +0.2 3,959,490 - -0.4 3,959,502 + -0.6 3,959,502 + -0.5 3,959,527 + +1.0 3,959,565 + +0.4 3,959,573 - -0.2 3,959,573 - -1.7
Or see this region's nucleotide sequence