Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01807

Experiment: PYE with Dimethyl Sulfoxide 0.4 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 vol%
1,930,723	+		CCNA_01806	0.35	+0.4
1,930,784	+		CCNA_01806	0.39	+1.3
1,930,812	-		CCNA_01806	0.41	-2.5
1,930,857	+		CCNA_01806	0.44	+0.3
1,930,937	-		CCNA_01806	0.50	+0.0
1,930,947	+		CCNA_01806	0.50	+0.9
1,931,036	+		CCNA_01806	0.57	+1.1
1,931,068	-		CCNA_01806	0.59	-0.3
1,931,110	+		CCNA_01806	0.62	+0.2
1,931,133	+		CCNA_01806	0.63	+0.2
1,931,141	-		CCNA_01806	0.64	-0.1
1,931,141	-		CCNA_01806	0.64	-0.0
1,931,164	+		CCNA_01806	0.65	+0.6
1,931,193	+		CCNA_01806	0.67	-0.5
1,931,223	+		CCNA_01806	0.69	+0.6
1,931,225	+		CCNA_01806	0.70	+0.2
1,931,255	+		CCNA_01806	0.72	-1.3
1,931,255	+		CCNA_01806	0.72	+0.1
1,931,255	+		CCNA_01806	0.72	+0.2
1,931,255	+		CCNA_01806	0.72	-1.1
1,931,260	+		CCNA_01806	0.72	+1.0
1,931,260	+		CCNA_01806	0.72	+0.5
1,931,268	-		CCNA_01806	0.72	-0.1
1,931,300	+		CCNA_01806	0.75	+0.6
1,931,366	+		CCNA_01806	0.79	+0.6
1,931,366	+		CCNA_01806	0.79	+0.1
1,931,366	+		CCNA_01806	0.79	+0.8
1,931,379	-		CCNA_01806	0.80	-0.3
1,931,389	+		CCNA_01806	0.81	-0.1
1,931,390	+		CCNA_01806	0.81	-1.7
1,931,398	-		CCNA_01806	0.81	-0.3
1,931,398	-		CCNA_01806	0.81	-0.7
1,931,427	-		CCNA_01806	0.83	+0.4
1,931,453	-		CCNA_01806	0.85	+0.5
1,931,460	+		CCNA_01806	0.86	+0.4
1,931,468	-		CCNA_01806	0.86	+0.7
1,931,474	+		CCNA_01806	0.87	+0.1
1,931,474	+		CCNA_01806	0.87	+0.6
1,931,479	+		CCNA_01806	0.87	+1.7
1,931,482	-		CCNA_01806	0.87	-0.5
1,931,578	-				-0.7
1,931,606	-				-0.4
1,931,640	+				-0.5
1,931,706	-				+0.6
1,931,731	+				-0.6
1,931,830	+				-0.6
1,931,904	+		CCNA_01807	0.13	-0.1
1,931,923	-		CCNA_01807	0.14	-0.1
1,931,948	-		CCNA_01807	0.16	-0.3
1,931,965	+		CCNA_01807	0.17	-0.8
1,931,973	-		CCNA_01807	0.18	+0.6
1,931,973	-		CCNA_01807	0.18	+1.5
1,932,048	-		CCNA_01807	0.22	-1.5
1,932,186	-		CCNA_01807	0.31	+0.1
1,932,202	+		CCNA_01807	0.32	-0.5
1,932,217	-		CCNA_01807	0.33	-0.4
1,932,240	-		CCNA_01807	0.35	+0.0
1,932,336	+		CCNA_01807	0.41	-0.3
1,932,344	-		CCNA_01807	0.41	-0.5
1,932,382	+		CCNA_01807	0.44	-1.3
1,932,382	+		CCNA_01807	0.44	+0.8
1,932,390	-		CCNA_01807	0.44	+0.4
1,932,390	-		CCNA_01807	0.44	+1.6
1,932,399	+		CCNA_01807	0.45	-0.8
1,932,495	-		CCNA_01807	0.51	-0.5
1,932,499	+		CCNA_01807	0.51	-1.2
1,932,499	+		CCNA_01807	0.51	-0.9
1,932,504	+		CCNA_01807	0.52	-1.2
1,932,507	-		CCNA_01807	0.52	-0.3
1,932,557	-		CCNA_01807	0.55	-0.5
1,932,567	+		CCNA_01807	0.56	-1.0
1,932,567	+		CCNA_01807	0.56	-0.6
1,932,567	+		CCNA_01807	0.56	+0.2
1,932,628	-		CCNA_01807	0.60	-0.3
1,932,669	-		CCNA_01807	0.62	-0.5
1,932,675	+		CCNA_01807	0.63	-0.4
1,932,675	+		CCNA_01807	0.63	-0.5
1,932,675	+		CCNA_01807	0.63	+0.5
1,932,675	+		CCNA_01807	0.63	-0.5
1,932,678	-		CCNA_01807	0.63	+1.0
1,932,678	-		CCNA_01807	0.63	-1.0
1,932,678	-		CCNA_01807	0.63	+0.9
1,932,680	+		CCNA_01807	0.63	-0.9
1,932,683	-		CCNA_01807	0.63	-0.1
1,932,715	-		CCNA_01807	0.65	+0.3
1,932,730	+		CCNA_01807	0.66	+0.4
1,932,745	-		CCNA_01807	0.67	-1.8
1,932,809	+		CCNA_01807	0.71	+0.8
1,932,817	-		CCNA_01807	0.72	+0.7
1,932,838	-		CCNA_01807	0.73	-0.1
1,932,871	+		CCNA_01807	0.75	-0.3
1,932,883	+		CCNA_01807	0.76	-0.6
1,932,886	-		CCNA_01807	0.76	+0.6
1,932,906	-		CCNA_01807	0.78	+0.5
1,932,917	+		CCNA_01807	0.78	+0.6
1,932,923	+		CCNA_01807	0.79	-0.1
1,932,944	+		CCNA_01807	0.80	+0.7
1,932,952	-		CCNA_01807	0.81	+0.2
1,932,973	+		CCNA_01807	0.82	-0.8
1,933,008	-		CCNA_01807	0.84	-0.7
1,933,015	+		CCNA_01807	0.85	+0.4
1,933,052	+		CCNA_01807	0.87	-0.5
1,933,072	-		CCNA_01807	0.88	-0.5
1,933,073	-		CCNA_01807	0.88	+0.6
1,933,078	-		CCNA_01807	0.89	-0.1
1,933,117	+				+0.9
1,933,122	+				-1.2
1,933,135	-				+1.5
1,933,135	-				+1.0
1,933,135	-				+0.9
1,933,330	-				+0.3
1,933,363	-				-1.2
1,933,413	+				+0.5
1,933,429	-				-0.1
1,933,459	+		CCNA_01808	0.11	+0.4
1,933,486	-		CCNA_01808	0.13	-1.3
1,933,497	+		CCNA_01808	0.14	+0.5
1,933,507	-		CCNA_01808	0.15	-0.3
1,933,521	+		CCNA_01808	0.17	-1.0
1,933,521	+		CCNA_01808	0.17	-1.9
1,933,528	-		CCNA_01808	0.17	-1.1
1,933,617	-		CCNA_01808	0.25	-0.9
1,933,647	-		CCNA_01808	0.28	-1.0
1,933,681	+		CCNA_01808	0.31	-0.2
1,933,692	+		CCNA_01808	0.32	-0.2
1,933,692	+		CCNA_01808	0.32	-1.1
1,933,692	+		CCNA_01808	0.32	-1.7
1,933,692	+		CCNA_01808	0.32	-0.8
1,933,699	-		CCNA_01808	0.33	-0.6
1,933,700	-		CCNA_01808	0.33	-0.2
1,933,700	-		CCNA_01808	0.33	+0.6
1,933,700	-		CCNA_01808	0.33	+0.0
1,933,742	-		CCNA_01808	0.37	-0.2
1,933,779	-		CCNA_01808	0.40	+0.1
1,933,803	-		CCNA_01808	0.43	-0.4
1,933,841	+		CCNA_01808	0.46	-0.6
1,933,850	-		CCNA_01808	0.47	+1.7
1,933,861	+		CCNA_01808	0.48	-1.4
1,933,880	+		CCNA_01808	0.50	+1.4
1,933,882	+		CCNA_01808	0.50	+0.7
1,933,947	+		CCNA_01808	0.56	+1.3
1,933,974	+		CCNA_01808	0.59	-0.6
1,933,982	+		CCNA_01808	0.59	-1.9
1,933,992	+		CCNA_01808	0.60	-1.4
1,934,000	-		CCNA_01808	0.61	-0.5
1,934,000	-		CCNA_01808	0.61	+0.2
1,934,000	-		CCNA_01808	0.61	+0.5
1,934,042	-		CCNA_01808	0.65	+0.3
1,934,058	-		CCNA_01808	0.66	+1.5
1,934,071	+		CCNA_01808	0.68	-1.0
1,934,079	-		CCNA_01808	0.68	-1.1
1,934,079	-		CCNA_01808	0.68	+1.1
1,934,191	-		CCNA_01808	0.79	-0.3
1,934,231	+		CCNA_01808	0.82	-0.4
1,934,231	+		CCNA_01808	0.82	+0.1
1,934,236	+		CCNA_01808	0.83	+0.8
1,934,236	+		CCNA_01808	0.83	+0.5
1,934,236	+		CCNA_01808	0.83	-0.8
1,934,244	-		CCNA_01808	0.84	+0.6