Strain Fitness in Bosea sp. OAE506 around ABIE41_RS06705

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
1,372,280	+		ABIE41_RS06700	0.35	-0.8
1,372,281	+		ABIE41_RS06700	0.35	+1.1
1,372,281	+		ABIE41_RS06700	0.35	+0.3
1,372,281	+		ABIE41_RS06700	0.35	+0.1
1,372,281	+		ABIE41_RS06700	0.35	+0.4
1,372,281	+		ABIE41_RS06700	0.35	+0.1
1,372,281	+		ABIE41_RS06700	0.35	-0.6
1,372,281	+		ABIE41_RS06700	0.35	+0.3
1,372,281	+		ABIE41_RS06700	0.35	-1.3
1,372,281	+		ABIE41_RS06700	0.35	+1.7
1,372,281	+		ABIE41_RS06700	0.35	-0.4
1,372,281	+		ABIE41_RS06700	0.35	+0.0
1,372,281	+		ABIE41_RS06700	0.35	+0.0
1,372,281	+		ABIE41_RS06700	0.35	-0.3
1,372,282	-		ABIE41_RS06700	0.35	-1.1
1,372,282	-		ABIE41_RS06700	0.35	+0.0
1,372,282	-		ABIE41_RS06700	0.35	-0.4
1,372,282	-		ABIE41_RS06700	0.35	-1.7
1,372,282	-		ABIE41_RS06700	0.35	-1.1
1,372,282	-		ABIE41_RS06700	0.35	-0.6
1,372,282	-		ABIE41_RS06700	0.35	-1.4
1,372,282	-		ABIE41_RS06700	0.35	-1.4
1,372,282	-		ABIE41_RS06700	0.35	-0.6
1,372,282	-		ABIE41_RS06700	0.35	+5.0
1,372,282	-		ABIE41_RS06700	0.35	+0.3
1,372,335	+		ABIE41_RS06700	0.39	-0.2
1,372,335	+		ABIE41_RS06700	0.39	+0.1
1,372,335	+		ABIE41_RS06700	0.39	-0.7
1,372,335	+		ABIE41_RS06700	0.39	+0.9
1,372,335	+		ABIE41_RS06700	0.39	+0.1
1,372,336	-		ABIE41_RS06700	0.39	+0.4
1,372,336	-		ABIE41_RS06700	0.39	-1.9
1,372,336	-		ABIE41_RS06700	0.39	+1.6
1,372,336	-		ABIE41_RS06700	0.39	-1.8
1,372,336	-		ABIE41_RS06700	0.39	+0.2
1,372,336	-		ABIE41_RS06700	0.39	-0.2
1,372,336	-		ABIE41_RS06700	0.39	-0.7
1,372,336	-		ABIE41_RS06700	0.39	-1.7
1,372,469	+		ABIE41_RS06700	0.49	+0.5
1,372,469	+		ABIE41_RS06700	0.49	-0.2
1,372,469	+		ABIE41_RS06700	0.49	+0.4
1,372,469	+		ABIE41_RS06700	0.49	+1.3
1,372,470	-		ABIE41_RS06700	0.49	+1.5
1,372,732	-		ABIE41_RS06700	0.70	-0.4
1,372,732	-		ABIE41_RS06700	0.70	-1.2
1,372,816	+		ABIE41_RS06700	0.76	+0.2
1,372,817	-		ABIE41_RS06700	0.77	+0.2
1,372,846	+		ABIE41_RS06700	0.79	-0.1
1,372,846	+		ABIE41_RS06700	0.79	+0.4
1,372,846	+		ABIE41_RS06700	0.79	-0.5
1,372,846	+		ABIE41_RS06700	0.79	-1.8
1,372,846	+		ABIE41_RS06700	0.79	+0.2
1,372,846	+		ABIE41_RS06700	0.79	-0.3
1,372,846	+		ABIE41_RS06700	0.79	-0.7
1,372,846	+		ABIE41_RS06700	0.79	-0.4
1,372,846	+		ABIE41_RS06700	0.79	-0.0
1,372,847	-		ABIE41_RS06700	0.79	-0.2
1,372,847	-		ABIE41_RS06700	0.79	+0.0
1,372,847	-		ABIE41_RS06700	0.79	-2.2
1,372,847	-		ABIE41_RS06700	0.79	-0.7
1,372,847	-		ABIE41_RS06700	0.79	-2.4
1,372,847	-		ABIE41_RS06700	0.79	-0.5
1,372,847	-		ABIE41_RS06700	0.79	-0.5
1,372,847	-		ABIE41_RS06700	0.79	-0.5
1,372,879	+		ABIE41_RS06700	0.81	-0.0
1,372,879	+		ABIE41_RS06700	0.81	+0.4
1,372,879	+		ABIE41_RS06700	0.81	+1.7
1,372,888	+		ABIE41_RS06700	0.82	-0.4
1,372,888	+		ABIE41_RS06700	0.82	+0.7
1,372,888	+		ABIE41_RS06700	0.82	-0.6
1,372,888	+		ABIE41_RS06700	0.82	-1.1
1,372,888	+		ABIE41_RS06700	0.82	-0.0
1,372,888	+		ABIE41_RS06700	0.82	-0.1
1,372,888	+		ABIE41_RS06700	0.82	+0.3
1,372,889	-		ABIE41_RS06700	0.82	-0.7
1,372,889	-		ABIE41_RS06700	0.82	-1.5
1,372,889	-		ABIE41_RS06700	0.82	+0.4
1,372,889	-		ABIE41_RS06700	0.82	-0.2
1,373,076	+				+0.9
1,373,077	+				-1.0
1,373,077	+				-1.7
1,373,077	+				-1.7
1,373,077	+				-0.7
1,373,077	+				+1.7
1,373,077	+				+0.4
1,373,078	-				-0.2
1,373,078	-				-0.0
1,373,078	-				-0.6
1,373,078	-				+0.7
1,373,078	-				-1.1
1,373,078	-				+1.1
1,373,078	-				+0.1
1,373,187	+		ABIE41_RS06705	0.17	+0.8
1,373,187	+		ABIE41_RS06705	0.17	-1.2
1,373,187	+		ABIE41_RS06705	0.17	+0.2
1,373,306	+		ABIE41_RS06705	0.45	+0.8
1,373,306	+		ABIE41_RS06705	0.45	+0.0
1,373,306	+		ABIE41_RS06705	0.45	-0.3
1,373,306	+		ABIE41_RS06705	0.45	+0.4
1,373,306	+		ABIE41_RS06705	0.45	+0.0
1,373,306	+		ABIE41_RS06705	0.45	-0.2
1,373,306	+		ABIE41_RS06705	0.45	+0.1
1,373,307	-		ABIE41_RS06705	0.46	+0.3
1,373,307	-		ABIE41_RS06705	0.46	+0.4
1,373,307	-		ABIE41_RS06705	0.46	-0.2
1,373,307	-		ABIE41_RS06705	0.46	+1.7
1,373,307	-		ABIE41_RS06705	0.46	-0.5
1,373,307	-		ABIE41_RS06705	0.46	-1.7
1,373,307	-		ABIE41_RS06705	0.46	+0.7
1,373,307	-		ABIE41_RS06705	0.46	-0.5
1,373,307	-		ABIE41_RS06705	0.46	-0.1
1,373,362	+		ABIE41_RS06705	0.59	-0.0
1,373,385	+		ABIE41_RS06705	0.64	+0.7
1,373,442	+		ABIE41_RS06705	0.78	+0.5
1,373,488	-		ABIE41_RS06705	0.88	+1.0
1,373,488	-		ABIE41_RS06705	0.88	+1.3
1,373,499	+				-0.4
1,373,500	-				+0.9
1,373,500	-				+0.6
1,373,507	+				-0.1
1,373,508	-				-1.1
1,373,584	+				-1.3
1,373,584	+				+1.7
1,373,585	-				+0.9
1,373,585	-				+0.4
1,373,585	-				-1.7
1,373,820	+				+0.4
1,373,821	-				-0.7
1,373,821	-				-0.6
1,373,821	-				-0.1
1,373,821	-				+0.6
1,373,850	-				+2.8
1,373,940	+				-0.8
1,373,940	+				+0.0
1,373,940	+				-0.2
1,373,940	+				-0.3
1,373,940	+				+0.4
1,373,941	-				-0.1
1,373,941	-				-0.1
1,374,013	+				-0.6
1,374,013	+				-0.4
1,374,013	+				-0.0
1,374,014	-				+0.7
1,374,014	-				+0.2
1,374,036	-				-0.2
1,374,036	-				+1.3
1,374,117	+				+0.2
1,374,117	+				-1.7
1,374,118	-				+0.3
1,374,118	-				-0.5
1,374,118	-				+0.4
1,374,118	-				+1.4
1,374,118	-				-1.3
1,374,118	-				+0.6
1,374,118	-				-0.9
1,374,118	-				+0.8
1,374,118	-				-0.7
1,374,215	+				+0.7
1,374,216	-				+1.0
1,374,216	-				+0.3
1,374,216	-				-2.2
1,374,217	+				-0.6
1,374,217	+				-0.7
1,374,217	+				-2.4
1,374,217	+				+0.5
1,374,217	+				-1.0
1,374,218	-				+0.1
1,374,218	-				-0.4
1,374,253	+				+0.0
1,374,253	+				-0.1
1,374,263	+				+0.2
1,374,263	+				-0.9
1,374,263	+				-0.9
1,374,263	+				+0.6
1,374,263	+				-0.1
1,374,263	+				-0.4
1,374,263	+				-0.4
1,374,264	-				+1.8
1,374,264	-				+1.0
1,374,264	-				+0.6
1,374,264	-				-0.1
1,374,264	-				+0.2
1,374,264	-				+1.0
1,374,264	-				-1.5
1,374,339	+				-0.8
1,374,340	+				+0.0
1,374,340	+				+0.4
1,374,340	+				+0.1
1,374,340	+				-0.1
1,374,340	+				+1.7
1,374,340	+				+1.0
1,374,340	+				-0.6
1,374,340	+				-1.1
1,374,341	-				-0.7
1,374,341	-				-0.4
1,374,341	-				-0.0
1,374,341	-				-0.2
1,374,341	-				-0.5
1,374,341	-				+0.6
1,374,341	-				+0.2
1,374,341	-				+0.6
1,374,390	+				+2.3
1,374,390	+				-0.2
1,374,390	+				-0.0
1,374,391	-				+0.1
1,374,409	+				-0.2
1,374,410	-				+0.7
1,374,410	-				+1.0