Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS16320

Experiment: D-Galactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Galactose (C)
3,235,159	+				-1.6
3,235,160	-				-1.2
3,235,160	-				+0.3
3,235,228	+		ABIE40_RS16315	0.17	-1.1
3,235,229	-		ABIE40_RS16315	0.17	-2.4
3,235,229	-		ABIE40_RS16315	0.17	-0.2
3,235,229	-		ABIE40_RS16315	0.17	+0.8
3,235,229	-		ABIE40_RS16315	0.17	+0.4
3,235,230	+		ABIE40_RS16315	0.17	+1.3
3,235,230	+		ABIE40_RS16315	0.17	-1.1
3,235,230	+		ABIE40_RS16315	0.17	-1.9
3,235,231	-		ABIE40_RS16315	0.17	-0.5
3,235,240	+		ABIE40_RS16315	0.18	-0.6
3,235,241	-		ABIE40_RS16315	0.18	+2.0
3,235,241	-		ABIE40_RS16315	0.18	-0.5
3,235,369	+		ABIE40_RS16315	0.31	-0.3
3,235,387	-		ABIE40_RS16315	0.33	+1.3
3,235,432	+		ABIE40_RS16315	0.38	-1.1
3,235,432	+		ABIE40_RS16315	0.38	-2.4
3,235,432	+		ABIE40_RS16315	0.38	+0.1
3,235,432	+		ABIE40_RS16315	0.38	-0.5
3,235,432	+		ABIE40_RS16315	0.38	+0.1
3,235,432	+		ABIE40_RS16315	0.38	-0.2
3,235,432	+		ABIE40_RS16315	0.38	-0.8
3,235,432	+		ABIE40_RS16315	0.38	+1.2
3,235,432	+		ABIE40_RS16315	0.38	-0.7
3,235,433	-		ABIE40_RS16315	0.38	-0.3
3,235,433	-		ABIE40_RS16315	0.38	+0.1
3,235,433	-		ABIE40_RS16315	0.38	-1.6
3,235,433	-		ABIE40_RS16315	0.38	-0.7
3,235,433	-		ABIE40_RS16315	0.38	-0.2
3,235,433	-		ABIE40_RS16315	0.38	-0.1
3,235,433	-		ABIE40_RS16315	0.38	+0.3
3,235,433	-		ABIE40_RS16315	0.38	-1.5
3,235,433	-		ABIE40_RS16315	0.38	-0.7
3,235,433	-		ABIE40_RS16315	0.38	+0.6
3,235,483	+		ABIE40_RS16315	0.43	-0.3
3,235,855	+		ABIE40_RS16315	0.81	-0.7
3,235,855	+		ABIE40_RS16315	0.81	-2.1
3,235,855	+		ABIE40_RS16315	0.81	-0.1
3,235,856	-		ABIE40_RS16315	0.81	+0.6
3,235,856	-		ABIE40_RS16315	0.81	-1.0
3,235,856	-		ABIE40_RS16315	0.81	-1.0
3,235,856	-		ABIE40_RS16315	0.81	-1.2
3,235,856	-		ABIE40_RS16315	0.81	+1.0
3,235,857	+		ABIE40_RS16315	0.81	-0.3
3,235,857	+		ABIE40_RS16315	0.81	-0.4
3,235,857	+		ABIE40_RS16315	0.81	-0.3
3,235,858	-		ABIE40_RS16315	0.81	-0.6
3,236,202	-		ABIE40_RS16320	0.19	-1.5
3,236,202	-		ABIE40_RS16320	0.19	-1.9
3,236,258	+		ABIE40_RS16320	0.26	-4.0
3,236,264	+		ABIE40_RS16320	0.27	-3.3
3,236,264	+		ABIE40_RS16320	0.27	+1.3
3,236,264	+		ABIE40_RS16320	0.27	-2.7
3,236,293	+		ABIE40_RS16320	0.31	-1.7
3,236,294	-		ABIE40_RS16320	0.31	-4.1
3,236,315	+		ABIE40_RS16320	0.34	-3.1
3,236,316	-		ABIE40_RS16320	0.34	-4.1
3,236,316	-		ABIE40_RS16320	0.34	-4.0
3,236,316	-		ABIE40_RS16320	0.34	-2.9
3,236,338	-		ABIE40_RS16320	0.37	-3.1
3,236,427	+		ABIE40_RS16320	0.48	-3.0
3,236,428	-		ABIE40_RS16320	0.48	-2.4
3,236,430	-		ABIE40_RS16320	0.49	-0.7
3,236,430	-		ABIE40_RS16320	0.49	-0.7
3,236,457	-		ABIE40_RS16320	0.52	-4.4
3,236,594	+		ABIE40_RS16320	0.70	-3.7
3,236,594	+		ABIE40_RS16320	0.70	-3.7
3,236,594	+		ABIE40_RS16320	0.70	-1.9
3,236,594	+		ABIE40_RS16320	0.70	-2.6
3,236,594	+		ABIE40_RS16320	0.70	-2.7
3,236,595	-		ABIE40_RS16320	0.70	-2.6
3,236,595	-		ABIE40_RS16320	0.70	-3.3
3,236,637	+		ABIE40_RS16320	0.75	-0.7
3,236,637	+		ABIE40_RS16320	0.75	-4.1
3,236,637	+		ABIE40_RS16320	0.75	-2.5
3,236,865	+				-1.5
3,236,922	+				-0.3
3,236,968	+				-0.9
3,236,968	+				-0.0
3,236,969	-				-0.7
3,236,979	+				-1.0
3,236,980	-				+0.4
3,236,995	+				-1.5
3,236,995	+				-2.1
3,236,995	+				-0.6
3,236,995	+				-0.4
3,236,996	-				-0.3
3,236,996	-				+0.5
3,236,996	-				-0.6
3,237,023	+				-1.0
3,237,024	-				+0.6
3,237,030	-				-0.2
3,237,030	-				-1.1
3,237,075	+				-0.3
3,237,076	-				-0.3
3,237,094	+				+0.4
3,237,117	+				+0.7
3,237,117	+				-1.7
3,237,117	+				-2.0
3,237,118	-				+0.1
3,237,204	+		ABIE40_RS16325	0.15	-2.7
3,237,204	+		ABIE40_RS16325	0.15	-0.8
3,237,204	+		ABIE40_RS16325	0.15	-0.1
3,237,204	+		ABIE40_RS16325	0.15	+0.6
3,237,205	-		ABIE40_RS16325	0.15	-0.9
3,237,205	-		ABIE40_RS16325	0.15	+0.6
3,237,262	-		ABIE40_RS16325	0.21	-0.1
3,237,288	+		ABIE40_RS16325	0.24	-0.8
3,237,288	+		ABIE40_RS16325	0.24	-0.8
3,237,288	+		ABIE40_RS16325	0.24	+0.7
3,237,289	-		ABIE40_RS16325	0.24	-0.1
3,237,517	-		ABIE40_RS16325	0.50	+0.1
3,237,517	-		ABIE40_RS16325	0.50	-1.1
3,237,517	-		ABIE40_RS16325	0.50	-1.3
3,237,517	-		ABIE40_RS16325	0.50	+0.9
3,237,523	+		ABIE40_RS16325	0.51	-0.7
3,237,523	+		ABIE40_RS16325	0.51	-0.2
3,237,523	+		ABIE40_RS16325	0.51	+0.6
3,237,523	+		ABIE40_RS16325	0.51	-0.4
3,237,523	+		ABIE40_RS16325	0.51	+0.3
3,237,524	-		ABIE40_RS16325	0.51	+0.3
3,237,524	-		ABIE40_RS16325	0.51	-1.7
3,237,525	+		ABIE40_RS16325	0.51	+0.6
3,237,525	+		ABIE40_RS16325	0.51	-0.3
3,237,525	+		ABIE40_RS16325	0.51	+0.2
3,237,525	+		ABIE40_RS16325	0.51	+0.2
3,237,526	-		ABIE40_RS16325	0.51	+0.4
3,237,526	-		ABIE40_RS16325	0.51	-0.2
3,237,526	-		ABIE40_RS16325	0.51	+0.2
3,237,576	+		ABIE40_RS16325	0.57	-0.5
3,237,576	+		ABIE40_RS16325	0.57	-0.1
3,237,576	+		ABIE40_RS16325	0.57	+1.7
3,237,576	+		ABIE40_RS16325	0.57	-0.2
3,237,576	+		ABIE40_RS16325	0.57	-0.8
3,237,576	+		ABIE40_RS16325	0.57	+0.1
3,237,577	-		ABIE40_RS16325	0.57	+0.4
3,237,577	-		ABIE40_RS16325	0.57	+4.3
3,237,654	+		ABIE40_RS16325	0.66	-0.9
3,237,655	-		ABIE40_RS16325	0.66	-1.0
3,237,720	+		ABIE40_RS16325	0.73	+0.8
3,237,720	+		ABIE40_RS16325	0.73	+0.9
3,237,721	-		ABIE40_RS16325	0.73	+1.3
3,237,792	+		ABIE40_RS16325	0.81	-1.2
3,237,792	+		ABIE40_RS16325	0.81	+0.1
3,237,792	+		ABIE40_RS16325	0.81	-2.9
3,237,792	+		ABIE40_RS16325	0.81	-0.2
3,237,792	+		ABIE40_RS16325	0.81	-0.7
3,237,792	+		ABIE40_RS16325	0.81	+0.5
3,237,792	+		ABIE40_RS16325	0.81	+0.7
3,237,792	+		ABIE40_RS16325	0.81	+0.2
3,237,792	+		ABIE40_RS16325	0.81	-1.0
3,237,792	+		ABIE40_RS16325	0.81	-0.8
3,237,793	-		ABIE40_RS16325	0.82	-1.0
3,237,793	-		ABIE40_RS16325	0.82	-0.9
3,237,793	-		ABIE40_RS16325	0.82	-0.1