Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS09140

Experiment: D-Galactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Galactose (C)
1,760,229	+		ABIE40_RS09130	0.84	+0.1
1,760,229	+		ABIE40_RS09130	0.84	+0.7
1,760,230	-		ABIE40_RS09130	0.84	+0.0
1,760,230	-		ABIE40_RS09130	0.84	+1.9
1,760,230	-		ABIE40_RS09130	0.84	+1.1
1,760,245	+		ABIE40_RS09130	0.86	-0.5
1,760,245	+		ABIE40_RS09130	0.86	-1.2
1,760,246	-		ABIE40_RS09130	0.86	+0.6
1,760,246	-		ABIE40_RS09130	0.86	-0.1
1,760,246	-		ABIE40_RS09130	0.86	-0.2
1,760,247	+		ABIE40_RS09130	0.86	-0.5
1,760,248	-		ABIE40_RS09130	0.87	+0.3
1,760,248	-		ABIE40_RS09130	0.87	-2.4
1,760,406	+				+0.9
1,760,637	+		ABIE40_RS09135	0.46	+0.0
1,760,645	-		ABIE40_RS09135	0.47	+0.4
1,760,745	+		ABIE40_RS09135	0.64	+0.1
1,760,745	+		ABIE40_RS09135	0.64	-0.3
1,760,746	-		ABIE40_RS09135	0.65	+1.4
1,760,746	-		ABIE40_RS09135	0.65	-1.3
1,760,746	-		ABIE40_RS09135	0.65	+2.1
1,760,980	-				-0.2
1,761,042	+				+0.4
1,761,042	+				+0.2
1,761,043	-				+0.2
1,761,043	-				+0.8
1,761,043	-				-0.2
1,761,091	+				-2.0
1,761,174	+				-0.4
1,761,175	-				-4.4
1,761,175	-				-4.0
1,761,175	-				-3.3
1,761,201	+				-1.5
1,761,225	+				-4.4
1,761,226	-				-3.6
1,761,226	-				-2.2
1,761,296	+				-1.5
1,761,296	+				-2.8
1,761,296	+				-6.4
1,761,297	-				+0.8
1,761,297	-				-2.9
1,761,297	-				-2.9
1,761,323	-				-4.0
1,761,344	+				-5.2
1,761,344	+				-3.6
1,761,345	-				-3.4
1,761,345	-				-5.2
1,761,345	-				-4.5
1,761,345	-				-4.9
1,761,346	+				-3.7
1,761,347	-		ABIE40_RS09140	0.10	-3.1
1,761,368	+		ABIE40_RS09140	0.11	-2.0
1,761,368	+		ABIE40_RS09140	0.11	-3.9
1,761,369	-		ABIE40_RS09140	0.12	-0.2
1,761,369	-		ABIE40_RS09140	0.12	-3.5
1,761,546	-		ABIE40_RS09140	0.24	-4.1
1,761,705	-		ABIE40_RS09140	0.35	-3.8
1,761,871	+		ABIE40_RS09140	0.46	-3.8
1,761,871	+		ABIE40_RS09140	0.46	-4.2
1,761,871	+		ABIE40_RS09140	0.46	-2.4
1,761,871	+		ABIE40_RS09140	0.46	-3.4
1,762,117	+		ABIE40_RS09140	0.64	-5.8
1,762,117	+		ABIE40_RS09140	0.64	-3.3
1,762,118	-		ABIE40_RS09140	0.64	-0.8
1,762,139	+		ABIE40_RS09140	0.65	-6.7
1,762,139	+		ABIE40_RS09140	0.65	-3.5
1,762,139	+		ABIE40_RS09140	0.65	-2.7
1,762,189	+		ABIE40_RS09140	0.69	-5.9
1,762,190	+		ABIE40_RS09140	0.69	-2.5
1,762,191	-		ABIE40_RS09140	0.69	-5.6
1,762,191	-		ABIE40_RS09140	0.69	-4.8
1,762,191	-		ABIE40_RS09140	0.69	-2.5
1,762,364	+		ABIE40_RS09140	0.81	-1.5
1,762,364	+		ABIE40_RS09140	0.81	-1.8
1,762,364	+		ABIE40_RS09140	0.81	-1.4
1,762,364	+		ABIE40_RS09140	0.81	-3.8
1,762,364	+		ABIE40_RS09140	0.81	-2.0
1,762,364	+		ABIE40_RS09140	0.81	-3.3
1,762,365	-		ABIE40_RS09140	0.81	-5.1
1,762,365	-		ABIE40_RS09140	0.81	-4.4
1,762,365	-		ABIE40_RS09140	0.81	-3.7
1,762,365	-		ABIE40_RS09140	0.81	-4.2
1,762,365	-		ABIE40_RS09140	0.81	-3.5
1,762,366	+		ABIE40_RS09140	0.81	-0.6
1,762,419	+		ABIE40_RS09140	0.85	-1.0
1,762,420	-		ABIE40_RS09140	0.85	-4.6
1,762,646	+				-3.7
1,762,646	+				-1.5
1,762,647	-				-2.4
1,762,647	-				-2.2
1,762,647	-				-3.0
1,762,655	+				-2.0
1,762,795	+		ABIE40_RS09145	0.49	-5.6
1,762,796	-		ABIE40_RS09145	0.49	-5.6
1,762,796	-		ABIE40_RS09145	0.49	-2.5
1,762,796	-		ABIE40_RS09145	0.49	-2.8
1,762,853	+		ABIE40_RS09145	0.67	-2.0
1,762,853	+		ABIE40_RS09145	0.67	-3.1
1,762,854	-		ABIE40_RS09145	0.67	-5.7
1,762,854	-		ABIE40_RS09145	0.67	-3.2
1,762,854	-		ABIE40_RS09145	0.67	-2.7
1,762,909	+		ABIE40_RS09145	0.85	-0.9
1,762,909	+		ABIE40_RS09145	0.85	-1.6
1,762,909	+		ABIE40_RS09145	0.85	-1.4
1,762,909	+		ABIE40_RS09145	0.85	-0.1
1,762,909	+		ABIE40_RS09145	0.85	+0.5
1,762,909	+		ABIE40_RS09145	0.85	-0.7
1,762,909	+		ABIE40_RS09145	0.85	-1.4
1,762,909	+		ABIE40_RS09145	0.85	-0.3
1,762,910	-		ABIE40_RS09145	0.85	-5.0
1,762,910	-		ABIE40_RS09145	0.85	-2.5
1,762,910	-		ABIE40_RS09145	0.85	-2.4
1,762,968	+				-5.6
1,762,968	+				-2.8
1,762,968	+				-3.4
1,762,969	-				-4.2
1,762,969	-				-1.5
1,763,100	+				-4.1
1,763,118	+				-3.6
1,763,118	+				-2.9
1,763,118	+				-4.7
1,763,118	+				-2.0
1,763,118	+				-5.0
1,763,118	+				-3.7
1,763,118	+				-4.7
1,763,118	+				-3.0
1,763,119	-				-2.8
1,763,119	-				-3.0
1,763,119	-				-4.0
1,763,119	-				-3.0
1,763,119	-				+0.0
1,763,142	+		ABIE40_RS09150	0.11	-2.7
1,763,196	+		ABIE40_RS09150	0.14	-3.9
1,763,196	+		ABIE40_RS09150	0.14	-2.9
1,763,196	+		ABIE40_RS09150	0.14	-2.6
1,763,196	+		ABIE40_RS09150	0.14	-2.4
1,763,196	+		ABIE40_RS09150	0.14	-2.2
1,763,196	+		ABIE40_RS09150	0.14	-3.5
1,763,197	-		ABIE40_RS09150	0.14	-5.2
1,763,197	-		ABIE40_RS09150	0.14	-5.6
1,763,397	+		ABIE40_RS09150	0.26	-5.0
1,763,397	+		ABIE40_RS09150	0.26	-5.6
1,763,397	+		ABIE40_RS09150	0.26	-4.8
1,763,398	-		ABIE40_RS09150	0.26	-3.5
1,763,531	+		ABIE40_RS09150	0.34	-5.9
1,763,543	+		ABIE40_RS09150	0.35	-5.0
1,763,569	-		ABIE40_RS09150	0.36	-4.3
1,763,569	-		ABIE40_RS09150	0.36	-5.1