Strain Fitness in Escherichia coli BW25113 around b4032
Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Maltose (C) |
---|---|---|---|---|---|
remove | |||||
4,239,652 | + | xylE | b4031 | 0.58 | +0.5 |
4,239,652 | + | xylE | b4031 | 0.58 | -0.0 |
4,239,652 | - | xylE | b4031 | 0.58 | +1.2 |
4,239,652 | - | xylE | b4031 | 0.58 | -0.4 |
4,239,655 | - | xylE | b4031 | 0.58 | +0.4 |
4,239,655 | - | xylE | b4031 | 0.58 | +0.7 |
4,239,655 | - | xylE | b4031 | 0.58 | -0.2 |
4,239,655 | - | xylE | b4031 | 0.58 | +0.1 |
4,239,678 | + | xylE | b4031 | 0.59 | -0.1 |
4,239,678 | + | xylE | b4031 | 0.59 | +0.6 |
4,239,686 | + | xylE | b4031 | 0.60 | -0.3 |
4,239,686 | + | xylE | b4031 | 0.60 | +0.4 |
4,239,686 | + | xylE | b4031 | 0.60 | +0.5 |
4,239,686 | + | xylE | b4031 | 0.60 | -0.6 |
4,239,688 | + | xylE | b4031 | 0.60 | -0.3 |
4,239,713 | - | xylE | b4031 | 0.62 | +0.3 |
4,239,781 | + | xylE | b4031 | 0.66 | +1.1 |
4,239,800 | + | xylE | b4031 | 0.68 | +0.0 |
4,239,801 | + | xylE | b4031 | 0.68 | +0.4 |
4,239,801 | + | xylE | b4031 | 0.68 | -0.1 |
4,239,801 | + | xylE | b4031 | 0.68 | +0.6 |
4,239,801 | + | xylE | b4031 | 0.68 | +0.9 |
4,239,809 | - | xylE | b4031 | 0.68 | -0.5 |
4,239,810 | - | xylE | b4031 | 0.68 | +0.1 |
4,239,813 | + | xylE | b4031 | 0.68 | -1.3 |
4,239,813 | + | xylE | b4031 | 0.68 | -0.2 |
4,239,821 | - | xylE | b4031 | 0.69 | +0.1 |
4,239,823 | + | xylE | b4031 | 0.69 | -0.9 |
4,239,823 | + | xylE | b4031 | 0.69 | -0.8 |
4,239,823 | + | xylE | b4031 | 0.69 | +1.2 |
4,239,823 | + | xylE | b4031 | 0.69 | -0.5 |
4,239,826 | + | xylE | b4031 | 0.69 | -0.2 |
4,239,826 | + | xylE | b4031 | 0.69 | -0.7 |
4,239,826 | + | xylE | b4031 | 0.69 | +1.5 |
4,239,832 | - | xylE | b4031 | 0.70 | +0.4 |
4,239,834 | - | xylE | b4031 | 0.70 | -0.5 |
4,239,835 | + | xylE | b4031 | 0.70 | +0.8 |
4,239,838 | - | xylE | b4031 | 0.70 | -0.4 |
4,239,849 | + | xylE | b4031 | 0.71 | -1.5 |
4,239,854 | + | xylE | b4031 | 0.71 | -0.8 |
4,239,855 | + | xylE | b4031 | 0.71 | -0.1 |
4,239,855 | + | xylE | b4031 | 0.71 | +0.5 |
4,239,855 | + | -0.3 | |||
4,239,855 | + | xylE | b4031 | 0.71 | -0.9 |
4,239,855 | + | xylE | b4031 | 0.71 | -0.1 |
4,239,863 | - | xylE | b4031 | 0.72 | +0.5 |
4,239,863 | - | xylE | b4031 | 0.72 | -0.9 |
4,239,875 | - | xylE | b4031 | 0.73 | -0.0 |
4,239,907 | + | xylE | b4031 | 0.75 | +0.2 |
4,239,907 | - | xylE | b4031 | 0.75 | +0.4 |
4,239,907 | - | xylE | b4031 | 0.75 | +0.5 |
4,239,921 | - | xylE | b4031 | 0.76 | +0.0 |
4,239,921 | - | xylE | b4031 | 0.76 | -0.3 |
4,239,922 | - | xylE | b4031 | 0.76 | +0.8 |
4,239,922 | - | xylE | b4031 | 0.76 | -0.9 |
4,239,922 | - | xylE | b4031 | 0.76 | +2.0 |
4,239,922 | - | xylE | b4031 | 0.76 | +0.1 |
4,239,923 | + | xylE | b4031 | 0.76 | +0.3 |
4,239,930 | - | xylE | b4031 | 0.76 | -0.5 |
4,239,931 | - | xylE | b4031 | 0.76 | -0.2 |
4,239,933 | + | xylE | b4031 | 0.77 | +0.3 |
4,239,933 | - | xylE | b4031 | 0.77 | -0.4 |
4,239,936 | - | xylE | b4031 | 0.77 | +0.9 |
4,239,936 | - | xylE | b4031 | 0.77 | +1.7 |
4,239,936 | - | xylE | b4031 | 0.77 | +0.6 |
4,239,955 | - | xylE | b4031 | 0.78 | +0.4 |
4,239,969 | + | xylE | b4031 | 0.79 | +0.5 |
4,239,969 | + | xylE | b4031 | 0.79 | -0.1 |
4,239,969 | + | xylE | b4031 | 0.79 | -0.6 |
4,239,969 | + | xylE | b4031 | 0.79 | -0.8 |
4,239,969 | + | xylE | b4031 | 0.79 | -0.0 |
4,239,974 | + | xylE | b4031 | 0.79 | -0.0 |
4,239,982 | - | xylE | b4031 | 0.80 | +0.6 |
4,240,014 | - | xylE | b4031 | 0.82 | +0.7 |
4,240,019 | + | xylE | b4031 | 0.82 | -0.1 |
4,240,032 | - | xylE | b4031 | 0.83 | -0.4 |
4,240,042 | + | xylE | b4031 | 0.84 | +0.3 |
4,240,042 | + | xylE | b4031 | 0.84 | -0.8 |
4,240,044 | + | xylE | b4031 | 0.84 | -0.4 |
4,240,052 | - | xylE | b4031 | 0.85 | +0.3 |
4,240,052 | - | xylE | b4031 | 0.85 | +1.3 |
4,240,059 | - | xylE | b4031 | 0.85 | -0.1 |
4,240,063 | + | xylE | b4031 | 0.85 | -0.3 |
4,240,071 | - | xylE | b4031 | 0.86 | -1.0 |
4,240,074 | - | xylE | b4031 | 0.86 | +0.2 |
4,240,082 | + | xylE | b4031 | 0.87 | -0.4 |
4,240,151 | + | +0.1 | |||
4,240,151 | + | +0.3 | |||
4,240,158 | + | -0.6 | |||
4,240,159 | + | +0.1 | |||
4,240,159 | + | -0.7 | |||
4,240,170 | + | +0.1 | |||
4,240,172 | + | +0.2 | |||
4,240,177 | - | -0.3 | |||
4,240,197 | + | +0.5 | |||
4,240,197 | + | +0.0 | |||
4,240,258 | + | -0.9 | |||
4,240,271 | + | +0.7 | |||
4,240,275 | + | -0.8 | |||
4,240,275 | + | -1.4 | |||
4,240,275 | + | -0.3 | |||
4,240,286 | + | -1.1 | |||
4,240,286 | + | -1.0 | |||
4,240,294 | - | -0.2 | |||
4,240,294 | - | -0.7 | |||
4,240,294 | - | +0.1 | |||
4,240,294 | - | +0.3 | |||
4,240,305 | + | -1.1 | |||
4,240,305 | + | +0.2 | |||
4,240,320 | + | -1.8 | |||
4,240,444 | + | +0.3 | |||
4,240,444 | + | +1.5 | |||
4,240,575 | - | +0.1 | |||
4,240,581 | + | -0.8 | |||
4,240,585 | - | +0.8 | |||
4,240,587 | - | -0.3 | |||
4,240,599 | - | -0.9 | |||
4,240,609 | + | -0.1 | |||
4,240,617 | - | -0.9 | |||
4,240,617 | - | -1.1 | |||
4,240,617 | - | +0.2 | |||
4,240,623 | - | +0.5 | |||
4,240,631 | - | +0.5 | |||
4,240,631 | - | -0.6 | |||
4,240,641 | - | +0.5 | |||
4,240,703 | + | -1.2 | |||
4,240,711 | - | -2.1 | |||
4,240,721 | - | -1.8 | |||
4,240,721 | - | -0.6 | |||
4,240,729 | - | -1.0 | |||
4,240,807 | + | malG | b4032 | 0.18 | -2.3 |
4,240,807 | + | malG | b4032 | 0.18 | -1.9 |
4,240,809 | + | malG | b4032 | 0.18 | -2.0 |
4,240,817 | - | malG | b4032 | 0.19 | -0.3 |
4,240,817 | - | malG | b4032 | 0.19 | -1.3 |
4,240,924 | - | +0.7 | |||
4,240,971 | - | malG | b4032 | 0.36 | -2.4 |
4,240,971 | - | malG | b4032 | 0.36 | -1.5 |
4,241,068 | - | malG | b4032 | 0.47 | -2.5 |
4,241,095 | + | malG | b4032 | 0.50 | -2.6 |
4,241,103 | - | malG | b4032 | 0.51 | -0.5 |
4,241,103 | - | malG | b4032 | 0.51 | -1.1 |
4,241,150 | - | malG | b4032 | 0.56 | -1.1 |
4,241,227 | - | malG | b4032 | 0.65 | -2.0 |
4,241,227 | - | malG | b4032 | 0.65 | -1.6 |
4,241,300 | - | malG | b4032 | 0.73 | -2.3 |
4,241,321 | - | malG | b4032 | 0.75 | -2.7 |
4,241,325 | + | malG | b4032 | 0.76 | -2.4 |
4,241,333 | - | malG | b4032 | 0.77 | -4.3 |
4,241,425 | + | malG | b4032 | 0.87 | -2.2 |
4,241,428 | + | malG | b4032 | 0.87 | -1.1 |
4,241,428 | + | malG | b4032 | 0.87 | -2.7 |
4,241,439 | + | malG | b4032 | 0.89 | -3.4 |
4,241,447 | - | malG | b4032 | 0.90 | -1.1 |
4,241,708 | + | -1.7 | |||
4,241,716 | - | malF | b4033 | 0.10 | -2.0 |
4,241,816 | + | malF | b4033 | 0.17 | -0.4 |
4,241,844 | - | malF | b4033 | 0.19 | -0.8 |
4,241,844 | - | malF | b4033 | 0.19 | -3.7 |
4,241,881 | + | malF | b4033 | 0.21 | -1.3 |
4,241,881 | + | malF | b4033 | 0.21 | -1.6 |
4,241,883 | + | malF | b4033 | 0.21 | -3.6 |
4,241,889 | - | malF | b4033 | 0.22 | -3.2 |
4,241,889 | - | malF | b4033 | 0.22 | -1.7 |
4,241,918 | + | malF | b4033 | 0.24 | -1.3 |
4,241,953 | - | malF | b4033 | 0.26 | -2.1 |
4,241,986 | - | malF | b4033 | 0.28 | -2.3 |
4,241,986 | - | malF | b4033 | 0.28 | -1.7 |
4,242,010 | + | malF | b4033 | 0.30 | -2.6 |
4,242,016 | - | malF | b4033 | 0.30 | -3.1 |
4,242,044 | + | malF | b4033 | 0.32 | -3.1 |
4,242,120 | - | malF | b4033 | 0.37 | -1.5 |
4,242,120 | - | malF | b4033 | 0.37 | -2.0 |
4,242,135 | - | malF | b4033 | 0.38 | -1.9 |
4,242,135 | - | malF | b4033 | 0.38 | -1.6 |
4,242,180 | + | malF | b4033 | 0.41 | -1.0 |
4,242,198 | - | malF | b4033 | 0.42 | -2.3 |
4,242,198 | - | malF | b4033 | 0.42 | -1.6 |
4,242,198 | - | malF | b4033 | 0.42 | -3.0 |
4,242,198 | - | malF | b4033 | 0.42 | -2.3 |
4,242,241 | + | malF | b4033 | 0.44 | -1.3 |
4,242,338 | - | malF | b4033 | 0.51 | -2.6 |
4,242,338 | - | malF | b4033 | 0.51 | -2.2 |
4,242,362 | + | malF | b4033 | 0.52 | +1.7 |
4,242,385 | - | malF | b4033 | 0.54 | -2.8 |
4,242,432 | + | malF | b4033 | 0.57 | -2.8 |
4,242,434 | - | malF | b4033 | 0.57 | -2.0 |
4,242,438 | - | malF | b4033 | 0.57 | -0.4 |
4,242,455 | - | malF | b4033 | 0.58 | -2.6 |
4,242,472 | - | malF | b4033 | 0.59 | -3.3 |
4,242,472 | - | malF | b4033 | 0.59 | -2.8 |
4,242,472 | - | malF | b4033 | 0.59 | -2.3 |
4,242,515 | - | malF | b4033 | 0.62 | -3.0 |
Or see this region's nucleotide sequence