Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4664 and PfGW456L13_4665 are separated by 0 nucleotides PfGW456L13_4665 and PfGW456L13_4666 are separated by 481 nucleotides PfGW456L13_4666 and PfGW456L13_4667 are separated by 45 nucleotides PfGW456L13_4667 and PfGW456L13_4668 are separated by 53 nucleotides
PfGW456L13_4664 - Putative NADPH-quinone reductase (modulator of drug activity B), at 5,203,940 to 5,204,362
_4664
PfGW456L13_4665 - FIG00957354: hypothetical protein, at 5,204,363 to 5,204,557
_4665
PfGW456L13_4666 - Decarboxylase family protein, at 5,205,039 to 5,206,157
_4666
PfGW456L13_4667 - Regulatory protein RecX, at 5,206,203 to 5,206,625
_4667
PfGW456L13_4668 - RecA protein, at 5,206,679 to 5,207,737
_4668
Position (kb) 5205
5206
5207 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5204.108 kb on + strand, within PfGW456L13_4664 at 5204.108 kb on + strand, within PfGW456L13_4664 at 5204.109 kb on - strand, within PfGW456L13_4664 at 5204.109 kb on - strand, within PfGW456L13_4664 at 5204.195 kb on + strand, within PfGW456L13_4664 at 5204.196 kb on - strand, within PfGW456L13_4664 at 5204.196 kb on - strand, within PfGW456L13_4664 at 5204.196 kb on - strand, within PfGW456L13_4664 at 5204.196 kb on - strand, within PfGW456L13_4664 at 5204.196 kb on - strand, within PfGW456L13_4664 at 5204.271 kb on - strand, within PfGW456L13_4664 at 5204.360 kb on + strand at 5204.361 kb on - strand at 5204.361 kb on - strand at 5204.520 kb on + strand, within PfGW456L13_4665 at 5204.521 kb on - strand, within PfGW456L13_4665 at 5204.616 kb on + strand at 5204.616 kb on + strand at 5204.616 kb on + strand at 5204.617 kb on - strand at 5204.617 kb on - strand at 5204.617 kb on - strand at 5204.617 kb on - strand at 5204.617 kb on - strand at 5204.617 kb on - strand at 5204.661 kb on + strand at 5204.662 kb on - strand at 5204.662 kb on - strand at 5204.662 kb on - strand at 5204.666 kb on + strand at 5204.666 kb on + strand at 5204.666 kb on + strand at 5204.666 kb on + strand at 5204.667 kb on - strand at 5204.667 kb on - strand at 5204.667 kb on - strand at 5204.667 kb on - strand at 5204.667 kb on - strand at 5204.670 kb on - strand at 5204.801 kb on + strand at 5204.801 kb on + strand at 5204.802 kb on - strand at 5204.863 kb on + strand at 5204.863 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.938 kb on - strand at 5204.938 kb on - strand at 5204.938 kb on - strand at 5204.938 kb on - strand at 5204.938 kb on - strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5205.045 kb on + strand at 5205.046 kb on - strand at 5205.168 kb on - strand, within PfGW456L13_4666 at 5205.185 kb on - strand, within PfGW456L13_4666 at 5205.185 kb on - strand, within PfGW456L13_4666 at 5205.185 kb on - strand, within PfGW456L13_4666 at 5205.342 kb on + strand, within PfGW456L13_4666 at 5205.342 kb on + strand, within PfGW456L13_4666 at 5205.342 kb on + strand, within PfGW456L13_4666 at 5205.343 kb on - strand, within PfGW456L13_4666 at 5205.343 kb on - strand, within PfGW456L13_4666 at 5205.343 kb on - strand, within PfGW456L13_4666 at 5205.474 kb on - strand, within PfGW456L13_4666 at 5205.635 kb on - strand, within PfGW456L13_4666 at 5205.756 kb on + strand, within PfGW456L13_4666 at 5205.756 kb on + strand, within PfGW456L13_4666 at 5205.757 kb on - strand, within PfGW456L13_4666 at 5205.757 kb on - strand, within PfGW456L13_4666 at 5205.757 kb on - strand, within PfGW456L13_4666 at 5205.757 kb on - strand, within PfGW456L13_4666 at 5205.795 kb on + strand, within PfGW456L13_4666 at 5205.795 kb on + strand, within PfGW456L13_4666 at 5205.796 kb on - strand, within PfGW456L13_4666 at 5205.834 kb on + strand, within PfGW456L13_4666 at 5205.834 kb on + strand, within PfGW456L13_4666 at 5205.834 kb on + strand, within PfGW456L13_4666 at 5205.834 kb on + strand, within PfGW456L13_4666 at 5205.835 kb on - strand, within PfGW456L13_4666 at 5205.975 kb on + strand, within PfGW456L13_4666 at 5205.975 kb on + strand, within PfGW456L13_4666 at 5205.976 kb on - strand, within PfGW456L13_4666 at 5205.976 kb on - strand, within PfGW456L13_4666 at 5205.976 kb on - strand, within PfGW456L13_4666 at 5206.077 kb on + strand at 5206.077 kb on + strand at 5206.077 kb on + strand at 5206.077 kb on + strand at 5206.078 kb on - strand at 5206.078 kb on - strand at 5206.078 kb on - strand at 5206.078 kb on - strand at 5206.120 kb on + strand at 5206.120 kb on + strand at 5206.120 kb on + strand at 5206.121 kb on - strand at 5206.163 kb on - strand at 5206.163 kb on - strand at 5206.182 kb on + strand at 5206.182 kb on + strand at 5206.182 kb on + strand at 5206.182 kb on + strand at 5206.183 kb on - strand at 5206.183 kb on - strand at 5206.183 kb on - strand at 5206.186 kb on + strand at 5206.187 kb on - strand at 5206.187 kb on - strand at 5206.256 kb on - strand, within PfGW456L13_4667 at 5206.341 kb on - strand, within PfGW456L13_4667 at 5206.440 kb on + strand, within PfGW456L13_4667 at 5206.441 kb on - strand, within PfGW456L13_4667 at 5206.578 kb on - strand, within PfGW456L13_4667 at 5206.863 kb on + strand, within PfGW456L13_4668 at 5206.864 kb on - strand, within PfGW456L13_4668 at 5206.864 kb on - strand, within PfGW456L13_4668 at 5206.864 kb on - strand, within PfGW456L13_4668 at 5206.870 kb on - strand, within PfGW456L13_4668 at 5206.935 kb on + strand, within PfGW456L13_4668 at 5206.935 kb on + strand, within PfGW456L13_4668 at 5206.936 kb on - strand, within PfGW456L13_4668 at 5207.088 kb on + strand, within PfGW456L13_4668 at 5207.089 kb on - strand, within PfGW456L13_4668 at 5207.089 kb on - strand, within PfGW456L13_4668 at 5207.089 kb on - strand, within PfGW456L13_4668 at 5207.104 kb on + strand, within PfGW456L13_4668 at 5207.153 kb on - strand, within PfGW456L13_4668
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 5,204,108 + PfGW456L13_4664 0.40 +0.4 5,204,108 + PfGW456L13_4664 0.40 +0.9 5,204,109 - PfGW456L13_4664 0.40 +0.1 5,204,109 - PfGW456L13_4664 0.40 -3.0 5,204,195 + PfGW456L13_4664 0.60 +0.7 5,204,196 - PfGW456L13_4664 0.61 -1.7 5,204,196 - PfGW456L13_4664 0.61 -2.1 5,204,196 - PfGW456L13_4664 0.61 -0.7 5,204,196 - PfGW456L13_4664 0.61 -0.8 5,204,196 - PfGW456L13_4664 0.61 -1.5 5,204,271 - PfGW456L13_4664 0.78 +0.9 5,204,360 + +0.3 5,204,361 - -2.3 5,204,361 - -0.7 5,204,520 + PfGW456L13_4665 0.81 -0.8 5,204,521 - PfGW456L13_4665 0.81 -2.1 5,204,616 + +0.8 5,204,616 + -1.5 5,204,616 + +1.7 5,204,617 - -0.5 5,204,617 - -1.6 5,204,617 - +1.8 5,204,617 - +0.8 5,204,617 - +1.6 5,204,617 - +0.1 5,204,661 + -0.7 5,204,662 - +0.3 5,204,662 - -0.7 5,204,662 - -2.4 5,204,666 + -0.5 5,204,666 + -2.6 5,204,666 + +1.3 5,204,666 + +0.3 5,204,667 - -0.3 5,204,667 - -2.9 5,204,667 - -0.7 5,204,667 - +0.2 5,204,667 - -0.7 5,204,670 - +1.2 5,204,801 + -1.0 5,204,801 + -0.1 5,204,802 - +1.8 5,204,863 + +1.4 5,204,863 + -0.3 5,204,937 + +1.2 5,204,937 + +0.2 5,204,937 + -0.8 5,204,937 + +1.4 5,204,937 + -1.2 5,204,937 + +0.1 5,204,937 + +0.9 5,204,937 + +0.7 5,204,937 + -0.1 5,204,937 + +1.6 5,204,937 + -0.5 5,204,937 + -0.8 5,204,937 + -0.2 5,204,938 - -0.9 5,204,938 - -0.6 5,204,938 - -3.0 5,204,938 - -0.5 5,204,938 - -0.6 5,204,997 + +0.9 5,204,997 + +0.0 5,204,997 + +1.2 5,204,997 + +0.3 5,204,997 + -1.0 5,204,997 + +1.6 5,204,997 + -1.5 5,204,997 + -2.2 5,204,997 + -1.7 5,204,997 + +0.7 5,204,997 + +1.4 5,204,997 + -1.0 5,204,997 + -0.1 5,204,997 + +1.7 5,204,998 - -0.8 5,204,998 - -0.5 5,204,998 - +1.4 5,204,998 - -3.5 5,204,998 - -1.3 5,204,998 - +0.9 5,204,998 - -0.8 5,204,998 - +1.1 5,204,998 - -2.3 5,204,998 - -2.4 5,204,998 - -2.0 5,204,998 - +1.2 5,205,045 + -0.7 5,205,046 - -1.3 5,205,168 - PfGW456L13_4666 0.12 -1.1 5,205,185 - PfGW456L13_4666 0.13 +1.1 5,205,185 - PfGW456L13_4666 0.13 +1.4 5,205,185 - PfGW456L13_4666 0.13 +0.5 5,205,342 + PfGW456L13_4666 0.27 -0.5 5,205,342 + PfGW456L13_4666 0.27 +0.0 5,205,342 + PfGW456L13_4666 0.27 +0.1 5,205,343 - PfGW456L13_4666 0.27 +0.2 5,205,343 - PfGW456L13_4666 0.27 -0.4 5,205,343 - PfGW456L13_4666 0.27 -1.7 5,205,474 - PfGW456L13_4666 0.39 -0.1 5,205,635 - PfGW456L13_4666 0.53 -1.7 5,205,756 + PfGW456L13_4666 0.64 +1.1 5,205,756 + PfGW456L13_4666 0.64 +0.2 5,205,757 - PfGW456L13_4666 0.64 +0.5 5,205,757 - PfGW456L13_4666 0.64 +0.7 5,205,757 - PfGW456L13_4666 0.64 +0.7 5,205,757 - PfGW456L13_4666 0.64 -0.6 5,205,795 + PfGW456L13_4666 0.68 -1.5 5,205,795 + PfGW456L13_4666 0.68 +0.9 5,205,796 - PfGW456L13_4666 0.68 +1.2 5,205,834 + PfGW456L13_4666 0.71 -3.0 5,205,834 + PfGW456L13_4666 0.71 +0.6 5,205,834 + PfGW456L13_4666 0.71 -3.1 5,205,834 + PfGW456L13_4666 0.71 +0.9 5,205,835 - PfGW456L13_4666 0.71 +1.4 5,205,975 + PfGW456L13_4666 0.84 -1.2 5,205,975 + PfGW456L13_4666 0.84 +0.8 5,205,976 - PfGW456L13_4666 0.84 +0.7 5,205,976 - PfGW456L13_4666 0.84 +1.0 5,205,976 - PfGW456L13_4666 0.84 -1.5 5,206,077 + +0.5 5,206,077 + +1.5 5,206,077 + +0.5 5,206,077 + +0.1 5,206,078 - +1.7 5,206,078 - +0.8 5,206,078 - +0.4 5,206,078 - -3.2 5,206,120 + -0.0 5,206,120 + +0.6 5,206,120 + +1.1 5,206,121 - -1.0 5,206,163 - +3.7 5,206,163 - -1.3 5,206,182 + +1.8 5,206,182 + -0.3 5,206,182 + -0.3 5,206,182 + +1.0 5,206,183 - -0.8 5,206,183 - -2.6 5,206,183 - -2.2 5,206,186 + +1.5 5,206,187 - +0.6 5,206,187 - -1.3 5,206,256 - PfGW456L13_4667 0.13 -2.4 5,206,341 - PfGW456L13_4667 0.33 -2.7 5,206,440 + PfGW456L13_4667 0.56 +0.6 5,206,441 - PfGW456L13_4667 0.56 -3.3 5,206,578 - PfGW456L13_4667 0.89 +0.4 5,206,863 + PfGW456L13_4668 0.17 +0.1 5,206,864 - PfGW456L13_4668 0.17 -2.6 5,206,864 - PfGW456L13_4668 0.17 -0.7 5,206,864 - PfGW456L13_4668 0.17 -3.6 5,206,870 - PfGW456L13_4668 0.18 -2.5 5,206,935 + PfGW456L13_4668 0.24 -1.9 5,206,935 + PfGW456L13_4668 0.24 +2.5 5,206,936 - PfGW456L13_4668 0.24 +0.1 5,207,088 + PfGW456L13_4668 0.39 +0.7 5,207,089 - PfGW456L13_4668 0.39 +1.0 5,207,089 - PfGW456L13_4668 0.39 -0.2 5,207,089 - PfGW456L13_4668 0.39 +0.8 5,207,104 + PfGW456L13_4668 0.40 +2.1 5,207,153 - PfGW456L13_4668 0.45 +0.1
Or see this region's nucleotide sequence