Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4291

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
4,806,126	-		PfGW456L13_4290	0.10	+0.5
4,806,156	-		PfGW456L13_4290	0.13	+1.8
4,806,156	-		PfGW456L13_4290	0.13	+0.5
4,806,221	-		PfGW456L13_4290	0.19	-1.5
4,806,244	+		PfGW456L13_4290	0.22	+0.5
4,806,245	-		PfGW456L13_4290	0.22	+0.7
4,806,245	-		PfGW456L13_4290	0.22	+0.0
4,806,245	-		PfGW456L13_4290	0.22	+1.5
4,806,245	-		PfGW456L13_4290	0.22	+0.7
4,806,340	+		PfGW456L13_4290	0.31	+1.5
4,806,340	+		PfGW456L13_4290	0.31	+1.4
4,806,340	+		PfGW456L13_4290	0.31	-0.6
4,806,340	+		PfGW456L13_4290	0.31	+0.2
4,806,340	+		PfGW456L13_4290	0.31	+0.3
4,806,340	+		PfGW456L13_4290	0.31	-0.3
4,806,340	+		PfGW456L13_4290	0.31	-2.8
4,806,340	+		PfGW456L13_4290	0.31	-3.3
4,806,340	+		PfGW456L13_4290	0.31	+0.8
4,806,341	-		PfGW456L13_4290	0.31	-0.4
4,806,341	-		PfGW456L13_4290	0.31	-0.7
4,806,341	-		PfGW456L13_4290	0.31	-1.8
4,806,341	-		PfGW456L13_4290	0.31	+1.1
4,806,341	-		PfGW456L13_4290	0.31	-0.2
4,806,341	-		PfGW456L13_4290	0.31	+0.3
4,806,361	+		PfGW456L13_4290	0.33	-0.9
4,806,362	-		PfGW456L13_4290	0.33	-0.5
4,806,406	+		PfGW456L13_4290	0.38	-0.3
4,806,406	+		PfGW456L13_4290	0.38	-2.9
4,806,406	+		PfGW456L13_4290	0.38	-0.8
4,806,406	+		PfGW456L13_4290	0.38	-0.0
4,806,406	+		PfGW456L13_4290	0.38	-1.0
4,806,407	-		PfGW456L13_4290	0.38	-0.6
4,806,407	-		PfGW456L13_4290	0.38	+0.9
4,806,407	-		PfGW456L13_4290	0.38	+0.8
4,806,481	+		PfGW456L13_4290	0.45	-2.3
4,806,481	+		PfGW456L13_4290	0.45	+0.0
4,806,481	+		PfGW456L13_4290	0.45	-0.1
4,806,481	+		PfGW456L13_4290	0.45	+0.8
4,806,482	-		PfGW456L13_4290	0.45	+0.5
4,806,482	-		PfGW456L13_4290	0.45	-2.3
4,806,518	-		PfGW456L13_4290	0.49	+1.7
4,806,796	+		PfGW456L13_4290	0.76	+0.4
4,806,796	+		PfGW456L13_4290	0.76	-0.4
4,806,796	+		PfGW456L13_4290	0.76	+0.9
4,806,796	+		PfGW456L13_4290	0.76	+1.3
4,806,797	-		PfGW456L13_4290	0.76	+1.8
4,806,797	-		PfGW456L13_4290	0.76	-0.0
4,806,797	-		PfGW456L13_4290	0.76	-0.6
4,806,847	+		PfGW456L13_4290	0.81	-0.7
4,806,847	+		PfGW456L13_4290	0.81	+0.2
4,806,847	+		PfGW456L13_4290	0.81	-0.6
4,806,847	+		PfGW456L13_4290	0.81	-0.4
4,806,954	-				-1.4
4,806,988	+				+0.6
4,806,988	+				-1.0
4,806,988	+				-0.6
4,806,988	+				+1.7
4,806,989	-				+0.5
4,806,989	-				-0.2
4,806,989	-				+1.1
4,806,989	-				-0.2
4,806,989	-				-3.7
4,807,031	+				+0.2
4,807,031	+				-1.9
4,807,031	+				+1.4
4,807,032	-				-0.6
4,807,032	-				+0.5
4,807,032	-				-0.3
4,807,032	-				+1.1
4,807,032	-				-0.2
4,807,032	-				+1.4
4,807,095	+				+0.6
4,807,095	+				+0.4
4,807,095	+				+0.4
4,807,096	-				+0.0
4,807,096	-				-0.3
4,807,096	-				+1.6
4,807,159	+				+0.0
4,807,159	+				+0.6
4,807,159	+				-2.4
4,807,160	-				+1.0
4,807,161	+				-0.5
4,807,161	+				-0.8
4,807,162	-				-0.8
4,807,162	-				-0.9
4,807,162	-				-0.1
4,807,217	+				-1.0
4,807,217	+		PfGW456L13_4291	0.11	-4.0
4,807,217	+		PfGW456L13_4291	0.11	+0.7
4,807,217	+		PfGW456L13_4291	0.11	+1.2
4,807,217	+		PfGW456L13_4291	0.11	-0.5
4,807,217	+		PfGW456L13_4291	0.11	-2.2
4,807,218	-		PfGW456L13_4291	0.11	-2.9
4,807,218	-		PfGW456L13_4291	0.11	+1.7
4,807,218	-		PfGW456L13_4291	0.11	-0.9
4,807,218	-		PfGW456L13_4291	0.11	-1.1
4,807,218	-		PfGW456L13_4291	0.11	-0.7
4,807,218	-		PfGW456L13_4291	0.11	+0.4
4,807,218	-		PfGW456L13_4291	0.11	+0.2
4,807,382	+		PfGW456L13_4291	0.23	-1.7
4,807,383	-		PfGW456L13_4291	0.23	+0.8
4,807,383	-		PfGW456L13_4291	0.23	+1.8
4,807,503	-		PfGW456L13_4291	0.32	+0.7
4,807,524	-				+1.0
4,807,524	-		PfGW456L13_4291	0.33	+0.7
4,807,536	+		PfGW456L13_4291	0.34	-0.1
4,807,536	+		PfGW456L13_4291	0.34	+1.0
4,807,538	+		PfGW456L13_4291	0.34	+0.5
4,807,538	+		PfGW456L13_4291	0.34	+0.7
4,807,538	+		PfGW456L13_4291	0.34	-0.0
4,807,538	+		PfGW456L13_4291	0.34	-2.5
4,807,538	+		PfGW456L13_4291	0.34	+0.5
4,807,538	+		PfGW456L13_4291	0.34	+0.8
4,807,538	+		PfGW456L13_4291	0.34	-1.0
4,807,539	-		PfGW456L13_4291	0.34	+0.9
4,807,539	-		PfGW456L13_4291	0.34	-1.1
4,807,539	-		PfGW456L13_4291	0.34	+1.5
4,807,685	+		PfGW456L13_4291	0.45	-1.0
4,807,718	+		PfGW456L13_4291	0.47	-2.4
4,807,718	+		PfGW456L13_4291	0.47	+1.7
4,807,718	+		PfGW456L13_4291	0.47	-0.4
4,807,719	-		PfGW456L13_4291	0.47	-0.4
4,807,719	-		PfGW456L13_4291	0.47	-3.2
4,807,719	-		PfGW456L13_4291	0.47	-1.2
4,807,737	-		PfGW456L13_4291	0.48	-0.6
4,807,865	+		PfGW456L13_4291	0.57	+1.3
4,807,946	+		PfGW456L13_4291	0.63	+1.8
4,807,946	+		PfGW456L13_4291	0.63	+1.4
4,807,946	+		PfGW456L13_4291	0.63	-2.7
4,807,946	+		PfGW456L13_4291	0.63	-1.6
4,807,946	+		PfGW456L13_4291	0.63	-0.6
4,807,947	-		PfGW456L13_4291	0.63	-0.4
4,807,947	-		PfGW456L13_4291	0.63	-0.8
4,807,978	+		PfGW456L13_4291	0.65	+1.7
4,808,037	+		PfGW456L13_4291	0.70	+2.1
4,808,037	+		PfGW456L13_4291	0.70	-0.8
4,808,037	+		PfGW456L13_4291	0.70	-1.6
4,808,038	-		PfGW456L13_4291	0.70	-0.2
4,808,038	-		PfGW456L13_4291	0.70	+0.4
4,808,114	+		PfGW456L13_4291	0.75	+0.6
4,808,114	+		PfGW456L13_4291	0.75	-0.1
4,808,114	+		PfGW456L13_4291	0.75	+0.5
4,808,114	+		PfGW456L13_4291	0.75	+0.5
4,808,114	+		PfGW456L13_4291	0.75	+2.1
4,808,115	-		PfGW456L13_4291	0.75	-0.7
4,808,115	-		PfGW456L13_4291	0.75	-1.3
4,808,115	-		PfGW456L13_4291	0.75	+0.0
4,808,115	-		PfGW456L13_4291	0.75	+1.0
4,808,115	-		PfGW456L13_4291	0.75	-1.0
4,808,115	-		PfGW456L13_4291	0.75	-0.6
4,808,156	+		PfGW456L13_4291	0.78	-2.7
4,808,156	+		PfGW456L13_4291	0.78	-0.7
4,808,156	+		PfGW456L13_4291	0.78	+2.6
4,808,156	+		PfGW456L13_4291	0.78	-2.4
4,808,156	+		PfGW456L13_4291	0.78	+1.6
4,808,156	+		PfGW456L13_4291	0.78	+0.7
4,808,156	+		PfGW456L13_4291	0.78	-0.1
4,808,156	+		PfGW456L13_4291	0.78	-3.4
4,808,157	-		PfGW456L13_4291	0.78	+0.3
4,808,157	-		PfGW456L13_4291	0.78	+1.4
4,808,157	-		PfGW456L13_4291	0.78	-1.3
4,808,157	-		PfGW456L13_4291	0.78	-0.0
4,808,157	-		PfGW456L13_4291	0.78	-0.6
4,808,157	-		PfGW456L13_4291	0.78	-3.7
4,808,169	-		PfGW456L13_4291	0.79	+1.8
4,808,169	-		PfGW456L13_4291	0.79	-1.5
4,808,207	+		PfGW456L13_4291	0.82	+1.4
4,808,207	+		PfGW456L13_4291	0.82	+0.0
4,808,207	+		PfGW456L13_4291	0.82	-1.8
4,808,208	-		PfGW456L13_4291	0.82	+0.3
4,808,208	-		PfGW456L13_4291	0.82	-0.3
4,808,208	-		PfGW456L13_4291	0.82	-0.4
4,808,373	+				-1.4
4,808,374	-				-0.2
4,808,406	+				-3.0
4,808,406	+				-1.2
4,808,469	+				-3.8
4,808,476	+				-0.3
4,808,476	+				-2.4
4,808,477	-				-0.2
4,808,477	-				+1.4
4,808,477	-				+1.0
4,808,477	-				+1.8
4,808,484	-				+1.3
4,808,606	+				-0.6
4,808,626	+				+0.5
4,808,752	+		PfGW456L13_4292	0.22	-1.6
4,808,782	+		PfGW456L13_4292	0.26	-2.1
4,808,783	-		PfGW456L13_4292	0.26	-3.4
4,808,905	+		PfGW456L13_4292	0.40	-1.0
4,808,905	+		PfGW456L13_4292	0.40	-2.2
4,808,906	-		PfGW456L13_4292	0.40	-3.5
4,808,906	-		PfGW456L13_4292	0.40	-0.7
4,808,906	-		PfGW456L13_4292	0.40	-1.4
4,809,325	+		PfGW456L13_4292	0.89	-0.4
4,809,325	+		PfGW456L13_4292	0.89	+0.6
4,809,368	+				+0.4