Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2848

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
3,165,266	-		PfGW456L13_2847	0.79	-1.8
3,165,266	-		PfGW456L13_2847	0.79	+1.4
3,165,547	+		PfGW456L13_2847	0.87	-1.3
3,165,547	+		PfGW456L13_2847	0.87	-0.1
3,165,547	+		PfGW456L13_2847	0.87	-3.4
3,165,547	+		PfGW456L13_2847	0.87	-0.8
3,165,548	-				-1.5
3,165,548	-		PfGW456L13_2847	0.87	-0.3
3,165,621	-		PfGW456L13_2847	0.89	-0.1
3,165,621	-		PfGW456L13_2847	0.89	-3.6
3,165,720	+				-0.6
3,165,720	+				-1.6
3,165,720	+				-2.2
3,165,720	+				-1.8
3,165,720	+				-1.1
3,165,721	-				-2.5
3,165,721	-				+1.3
3,165,721	-				+0.4
3,165,824	-				-0.5
3,165,865	-				-1.5
3,165,946	+				+1.2
3,165,946	+				-2.5
3,165,947	-				-1.2
3,165,947	-				-0.7
3,165,947	-				-0.5
3,166,051	-				-0.4
3,166,162	-				-0.6
3,166,207	-				+0.8
3,166,207	-				-0.3
3,166,241	-				-0.8
3,166,295	+				-1.0
3,166,295	+				-0.6
3,166,296	-				+0.8
3,166,476	+		PfGW456L13_2848	0.12	-3.0
3,166,476	+		PfGW456L13_2848	0.12	+0.6
3,166,476	+		PfGW456L13_2848	0.12	-1.4
3,166,477	-		PfGW456L13_2848	0.12	-2.6
3,166,477	-		PfGW456L13_2848	0.12	+0.8
3,166,518	+		PfGW456L13_2848	0.14	-0.1
3,166,518	+				+1.5
3,166,518	+		PfGW456L13_2848	0.14	+1.2
3,166,519	-		PfGW456L13_2848	0.14	-2.1
3,166,680	+		PfGW456L13_2848	0.21	+0.4
3,166,681	-		PfGW456L13_2848	0.21	-2.0
3,166,893	+		PfGW456L13_2848	0.30	-2.9
3,166,893	+		PfGW456L13_2848	0.30	+0.8
3,166,920	+		PfGW456L13_2848	0.31	+0.5
3,166,920	+		PfGW456L13_2848	0.31	-3.4
3,166,921	-				+1.5
3,166,921	-		PfGW456L13_2848	0.31	-0.9
3,166,921	-		PfGW456L13_2848	0.31	+0.3
3,167,041	-		PfGW456L13_2848	0.36	-2.8
3,167,041	-		PfGW456L13_2848	0.36	+0.3
3,167,041	-		PfGW456L13_2848	0.36	+0.8
3,167,139	+		PfGW456L13_2848	0.41	+0.3
3,167,139	+		PfGW456L13_2848	0.41	-3.8
3,167,139	+		PfGW456L13_2848	0.41	+0.6
3,167,140	-		PfGW456L13_2848	0.41	+0.4
3,167,140	-		PfGW456L13_2848	0.41	-0.6
3,167,175	+		PfGW456L13_2848	0.42	-3.5
3,167,265	+		PfGW456L13_2848	0.46	+0.4
3,167,265	+		PfGW456L13_2848	0.46	+0.8
3,167,265	+		PfGW456L13_2848	0.46	+1.7
3,167,266	-		PfGW456L13_2848	0.46	-0.7
3,167,373	+		PfGW456L13_2848	0.51	-0.5
3,167,373	+		PfGW456L13_2848	0.51	+1.3
3,167,373	+		PfGW456L13_2848	0.51	-1.0
3,167,373	+		PfGW456L13_2848	0.51	-0.2
3,167,373	+		PfGW456L13_2848	0.51	-0.6
3,167,373	+		PfGW456L13_2848	0.51	-0.6
3,167,373	+		PfGW456L13_2848	0.51	+0.5
3,167,373	+		PfGW456L13_2848	0.51	+0.2
3,167,373	+		PfGW456L13_2848	0.51	-3.0
3,167,373	+		PfGW456L13_2848	0.51	-1.7
3,167,373	+		PfGW456L13_2848	0.51	+0.7
3,167,373	+		PfGW456L13_2848	0.51	-1.4
3,167,374	-		PfGW456L13_2848	0.51	+0.7
3,167,374	-		PfGW456L13_2848	0.51	-0.0
3,167,374	-		PfGW456L13_2848	0.51	-1.1
3,167,374	-		PfGW456L13_2848	0.51	+0.7
3,167,374	-		PfGW456L13_2848	0.51	-2.5
3,167,374	-		PfGW456L13_2848	0.51	+1.0
3,167,487	-		PfGW456L13_2848	0.56	-1.1
3,167,517	+		PfGW456L13_2848	0.57	+0.6
3,167,517	+		PfGW456L13_2848	0.57	-0.2
3,167,518	-		PfGW456L13_2848	0.57	-0.4
3,167,518	-		PfGW456L13_2848	0.57	-0.3
3,167,518	-		PfGW456L13_2848	0.57	+1.2
3,167,518	-		PfGW456L13_2848	0.57	-1.3
3,167,582	+		PfGW456L13_2848	0.60	+1.0
3,167,582	+		PfGW456L13_2848	0.60	-3.9
3,167,583	-		PfGW456L13_2848	0.60	+1.4
3,167,647	+		PfGW456L13_2848	0.63	+1.2
3,167,682	+		PfGW456L13_2848	0.64	-3.5
3,167,682	+		PfGW456L13_2848	0.64	+1.8
3,167,682	+		PfGW456L13_2848	0.64	+0.7
3,167,682	+				-1.5
3,167,682	+		PfGW456L13_2848	0.64	+0.3
3,167,682	+				+4.6
3,167,682	+		PfGW456L13_2848	0.64	+1.0
3,167,682	+		PfGW456L13_2848	0.64	+0.5
3,167,682	+		PfGW456L13_2848	0.64	-0.5
3,167,682	+		PfGW456L13_2848	0.64	-1.1
3,167,682	+		PfGW456L13_2848	0.64	-1.2
3,167,682	+		PfGW456L13_2848	0.64	-0.6
3,167,683	-		PfGW456L13_2848	0.64	-3.4
3,167,683	-		PfGW456L13_2848	0.64	+0.5
3,167,683	-		PfGW456L13_2848	0.64	+1.3
3,167,683	-		PfGW456L13_2848	0.64	-3.7
3,167,683	-		PfGW456L13_2848	0.64	-1.2
3,167,683	-		PfGW456L13_2848	0.64	-0.2
3,167,683	-		PfGW456L13_2848	0.64	-0.2
3,167,683	-		PfGW456L13_2848	0.64	-2.6
3,167,683	-		PfGW456L13_2848	0.64	+1.0
3,167,683	-		PfGW456L13_2848	0.64	+1.3
3,167,685	+		PfGW456L13_2848	0.64	+1.3
3,167,685	+		PfGW456L13_2848	0.64	-1.1
3,167,685	+		PfGW456L13_2848	0.64	+1.9
3,167,686	-		PfGW456L13_2848	0.64	-0.6
3,167,686	-		PfGW456L13_2848	0.64	+2.4
3,167,686	-		PfGW456L13_2848	0.64	-2.1
3,167,686	-		PfGW456L13_2848	0.64	+0.8
3,167,686	-		PfGW456L13_2848	0.64	-1.9
3,167,749	-		PfGW456L13_2848	0.67	+0.5
3,167,749	-		PfGW456L13_2848	0.67	-1.4
3,167,749	-		PfGW456L13_2848	0.67	+0.8
3,167,820	+		PfGW456L13_2848	0.70	+0.3
3,167,820	+		PfGW456L13_2848	0.70	-2.6
3,167,820	+		PfGW456L13_2848	0.70	-1.2
3,167,821	-		PfGW456L13_2848	0.70	-2.2
3,167,821	-		PfGW456L13_2848	0.70	-0.3
3,167,821	-		PfGW456L13_2848	0.70	-0.3
3,167,821	-		PfGW456L13_2848	0.70	-0.1
3,167,871	+		PfGW456L13_2848	0.72	+1.0
3,167,871	+		PfGW456L13_2848	0.72	+0.1
3,167,871	+		PfGW456L13_2848	0.72	+1.6
3,167,871	+		PfGW456L13_2848	0.72	+0.6
3,167,872	-		PfGW456L13_2848	0.72	+0.3
3,167,872	-		PfGW456L13_2848	0.72	+0.7
3,167,872	-		PfGW456L13_2848	0.72	+1.2
3,167,872	-		PfGW456L13_2848	0.72	-0.0
3,167,872	-		PfGW456L13_2848	0.72	-0.3
3,168,012	+		PfGW456L13_2848	0.78	-0.7
3,168,012	+		PfGW456L13_2848	0.78	+0.7
3,168,013	-		PfGW456L13_2848	0.78	+0.2
3,168,168	+		PfGW456L13_2848	0.85	-0.2
3,168,169	-		PfGW456L13_2848	0.85	-2.4
3,168,169	-		PfGW456L13_2848	0.85	-2.8
3,168,282	+				+0.4
3,168,394	+				+1.5
3,168,423	+				-1.1
3,168,423	+				+1.0
3,168,424	-				+1.0
3,168,424	-				+0.6
3,168,444	+				+0.8
3,168,444	+				-1.8
3,168,444	+				-0.4
3,168,529	+				-1.5
3,168,529	+				-2.2
3,168,636	+				-0.4
3,168,636	+				-0.3
3,168,636	+				+1.0
3,168,636	+				+0.3
3,168,636	+				+0.8
3,168,637	-				-0.3
3,168,637	-				-1.8
3,169,048	+		PfGW456L13_2849	0.51	-1.8
3,169,092	+		PfGW456L13_2849	0.59	-1.5
3,169,093	-		PfGW456L13_2849	0.59	+1.1
3,169,323	+				+0.9
3,169,323	+				-2.9
3,169,323	+				-0.4
3,169,324	-				+1.9
3,169,324	-				+1.6
3,169,324	-				+1.0
3,169,326	+				-1.2
3,169,326	+				+1.3
3,169,327	-				+0.3
3,169,327	-				-0.2
3,169,327	-				+0.9
3,169,329	+				+0.0
3,169,329	+				-0.5
3,169,329	+				+1.2
3,169,330	-				-1.0
3,169,330	-				-0.3
3,169,382	-				+1.2
3,169,478	-				+0.8