Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2828

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
3,133,994	+		PfGW456L13_2827	0.28	-0.1
3,134,000	+		PfGW456L13_2827	0.29	+0.4
3,134,000	+		PfGW456L13_2827	0.29	-1.2
3,134,000	+		PfGW456L13_2827	0.29	+0.1
3,134,000	+		PfGW456L13_2827	0.29	+0.5
3,134,001	-		PfGW456L13_2827	0.29	-0.8
3,134,001	-		PfGW456L13_2827	0.29	+0.8
3,134,001	-		PfGW456L13_2827	0.29	-1.0
3,134,001	-		PfGW456L13_2827	0.29	+0.2
3,134,001	-		PfGW456L13_2827	0.29	-1.5
3,134,001	-		PfGW456L13_2827	0.29	+0.9
3,134,001	-		PfGW456L13_2827	0.29	-0.9
3,134,037	+		PfGW456L13_2827	0.32	-0.8
3,134,037	+		PfGW456L13_2827	0.32	-0.2
3,134,037	+		PfGW456L13_2827	0.32	-1.1
3,134,038	-		PfGW456L13_2827	0.32	-0.8
3,134,108	+		PfGW456L13_2827	0.39	-2.0
3,134,108	+		PfGW456L13_2827	0.39	+1.2
3,134,108	+		PfGW456L13_2827	0.39	+0.3
3,134,108	+		PfGW456L13_2827	0.39	-0.5
3,134,109	-		PfGW456L13_2827	0.39	-1.2
3,134,109	-		PfGW456L13_2827	0.39	+0.2
3,134,109	-		PfGW456L13_2827	0.39	-0.2
3,134,109	-		PfGW456L13_2827	0.39	-1.0
3,134,109	-		PfGW456L13_2827	0.39	+0.1
3,134,109	-		PfGW456L13_2827	0.39	-0.3
3,134,109	-		PfGW456L13_2827	0.39	+0.4
3,134,109	-		PfGW456L13_2827	0.39	-3.0
3,134,109	-		PfGW456L13_2827	0.39	+0.2
3,134,109	-		PfGW456L13_2827	0.39	-3.5
3,134,198	+		PfGW456L13_2827	0.47	-1.0
3,134,199	-		PfGW456L13_2827	0.47	-0.3
3,134,330	+		PfGW456L13_2827	0.60	-0.1
3,134,330	+		PfGW456L13_2827	0.60	-0.1
3,134,331	-		PfGW456L13_2827	0.60	-0.0
3,134,357	+		PfGW456L13_2827	0.62	+0.0
3,134,357	+		PfGW456L13_2827	0.62	-1.3
3,134,418	-		PfGW456L13_2827	0.68	+1.5
3,134,418	-		PfGW456L13_2827	0.68	+1.1
3,134,513	+		PfGW456L13_2827	0.77	-1.2
3,134,565	-		PfGW456L13_2827	0.82	+2.1
3,134,614	+		PfGW456L13_2827	0.86	-1.7
3,134,615	-		PfGW456L13_2827	0.86	+0.4
3,134,615	-		PfGW456L13_2827	0.86	-0.4
3,134,628	-		PfGW456L13_2827	0.88	-1.0
3,134,628	-		PfGW456L13_2827	0.88	-0.2
3,134,630	+		PfGW456L13_2827	0.88	-0.9
3,134,630	+		PfGW456L13_2827	0.88	+1.8
3,134,630	+		PfGW456L13_2827	0.88	+0.6
3,134,631	-		PfGW456L13_2827	0.88	-0.4
3,134,631	-		PfGW456L13_2827	0.88	-0.1
3,134,631	-		PfGW456L13_2827	0.88	+1.3
3,134,645	+		PfGW456L13_2827	0.89	-1.0
3,134,645	+		PfGW456L13_2827	0.89	+0.2
3,134,646	-		PfGW456L13_2827	0.89	+1.2
3,134,646	-		PfGW456L13_2827	0.89	-1.9
3,134,760	+				-3.7
3,134,760	+				-0.9
3,134,760	+				-0.4
3,134,762	+				+0.4
3,134,762	+				-3.1
3,134,762	+				+1.9
3,134,762	+				+1.2
3,134,762	+				-0.7
3,134,762	+				-1.0
3,134,762	+				+0.4
3,134,762	+				-0.6
3,134,762	+				-2.7
3,134,762	+				-0.4
3,134,762	+				-0.8
3,134,763	-				+0.9
3,134,763	-				-0.3
3,134,763	-				+0.9
3,134,763	-				+0.8
3,134,763	-				-0.2
3,134,763	-				+0.0
3,134,763	-				-2.2
3,134,763	-				-0.4
3,134,763	-				+0.4
3,134,763	-				+0.6
3,134,763	-				+1.1
3,134,763	-				+0.7
3,134,778	+				-0.7
3,134,778	+				+1.0
3,134,778	+				-3.1
3,134,778	+				+0.9
3,134,778	+				+1.9
3,134,778	+				+0.1
3,134,778	+				-0.8
3,134,779	-				-1.5
3,134,779	-				+2.1
3,134,779	-				+0.2
3,134,904	+		PfGW456L13_2828	0.16	-0.3
3,134,904	+		PfGW456L13_2828	0.16	+0.2
3,134,905	-		PfGW456L13_2828	0.16	+0.1
3,134,905	-		PfGW456L13_2828	0.16	+0.8
3,134,905	-		PfGW456L13_2828	0.16	-1.9
3,134,905	-		PfGW456L13_2828	0.16	-0.8
3,135,057	+		PfGW456L13_2828	0.35	-0.2
3,135,058	-		PfGW456L13_2828	0.36	+0.4
3,135,123	+		PfGW456L13_2828	0.44	-2.8
3,135,124	-		PfGW456L13_2828	0.44	-0.9
3,135,282	+		PfGW456L13_2828	0.64	-3.1
3,135,282	+		PfGW456L13_2828	0.64	+0.6
3,135,282	+		PfGW456L13_2828	0.64	+1.5
3,135,283	-		PfGW456L13_2828	0.64	-3.8
3,135,283	-		PfGW456L13_2828	0.64	+0.9
3,135,295	-		PfGW456L13_2828	0.66	+1.0
3,135,469	-		PfGW456L13_2828	0.88	+1.3
3,135,469	-		PfGW456L13_2828	0.88	-3.0
3,135,479	+		PfGW456L13_2828	0.89	-2.2
3,135,480	-		PfGW456L13_2828	0.89	+1.1
3,135,496	-				-0.8
3,135,496	-				+0.7
3,135,496	-				-0.1
3,135,501	+				+0.4
3,135,501	+				-2.4
3,135,501	+				+0.2
3,135,608	+				-0.8
3,135,608	+				+1.2
3,135,608	+				-0.7
3,135,609	-				+0.0
3,135,609	-				+0.3
3,135,617	+				-0.3
3,135,618	-				+0.4
3,135,760	-		PfGW456L13_2829	0.22	+0.6
3,135,875	+		PfGW456L13_2829	0.34	+0.6
3,135,876	-		PfGW456L13_2829	0.34	+0.4
3,135,920	+		PfGW456L13_2829	0.39	-0.5
3,135,920	+		PfGW456L13_2829	0.39	+0.6
3,135,921	-		PfGW456L13_2829	0.39	-2.2
3,135,921	-		PfGW456L13_2829	0.39	+1.3
3,135,921	-		PfGW456L13_2829	0.39	+0.7
3,135,953	+		PfGW456L13_2829	0.43	-0.4
3,135,954	-		PfGW456L13_2829	0.43	-2.2
3,135,986	+		PfGW456L13_2829	0.46	+0.6
3,135,987	-		PfGW456L13_2829	0.46	+1.9
3,135,987	-		PfGW456L13_2829	0.46	+0.4
3,136,076	+		PfGW456L13_2829	0.56	-2.3
3,136,076	+		PfGW456L13_2829	0.56	+0.3
3,136,076	+		PfGW456L13_2829	0.56	+0.6
3,136,247	+		PfGW456L13_2829	0.75	+0.7
3,136,304	+		PfGW456L13_2829	0.81	-0.8
3,136,304	+		PfGW456L13_2829	0.81	+0.2
3,136,304	+		PfGW456L13_2829	0.81	+0.9
3,136,304	+		PfGW456L13_2829	0.81	+1.5
3,136,305	-		PfGW456L13_2829	0.81	+1.9
3,136,346	+		PfGW456L13_2829	0.85	+0.1
3,136,346	+		PfGW456L13_2829	0.85	-1.3
3,136,373	+		PfGW456L13_2829	0.88	+1.7
3,136,373	+		PfGW456L13_2829	0.88	-0.1
3,136,374	-		PfGW456L13_2829	0.88	+0.0
3,136,374	-		PfGW456L13_2829	0.88	+0.1