Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1635

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
1,796,185	+				+0.7
1,796,186	-				+0.5
1,796,244	+				+1.0
1,796,244	+				+0.9
1,796,245	-				-3.1
1,796,245	-				-1.4
1,796,245	-				-3.1
1,796,246	+				-3.3
1,796,246	+				+0.9
1,796,246	+				-1.8
1,796,246	+				+0.9
1,796,247	-				+0.7
1,796,247	-				-0.8
1,796,247	-				-0.4
1,796,247	-				-0.8
1,796,249	+				-2.4
1,796,249	+				-0.3
1,796,249	+				+0.9
1,796,249	+				-0.3
1,796,249	+				-0.1
1,796,249	+				-0.1
1,796,249	+				+0.6
1,796,249	+				-0.9
1,796,249	+				-0.1
1,796,250	-				-4.3
1,796,250	-				-3.0
1,796,250	-				-3.0
1,796,250	-				-3.0
1,796,250	-				+0.5
1,796,250	-				+0.2
1,796,250	-				-0.4
1,796,250	-				+0.9
1,796,250	-				+0.9
1,796,281	+				-1.5
1,796,281	+				-0.8
1,796,282	-				+0.1
1,796,282	-				+2.2
1,796,282	-				-3.0
1,796,282	-				-1.2
1,796,329	+				+0.4
1,796,329	+				+0.9
1,796,329	+				-1.1
1,796,329	+				-0.3
1,796,330	-				-0.5
1,796,333	+				-2.5
1,796,333	+				-1.4
1,796,333	+				+0.1
1,796,333	+				-0.0
1,796,333	+				+0.1
1,796,334	-				+0.4
1,796,334	-				+1.7
1,796,334	-				-1.5
1,796,334	-				-1.3
1,796,334	-				-0.6
1,796,334	-				-1.2
1,796,334	-				-0.4
1,796,334	-				-1.5
1,796,334	-				-1.1
1,796,334	-				-2.6
1,796,337	+				+0.0
1,796,337	+				+0.8
1,796,337	+				+0.5
1,796,337	+				-1.6
1,796,338	-				-1.0
1,796,338	-				-0.4
1,796,338	-				-2.7
1,796,338	-				-0.4
1,796,338	-				-0.3
1,796,343	+				+0.1
1,796,344	-				-0.8
1,796,348	-				+1.8
1,796,348	-				-2.4
1,796,350	+				-0.0
1,796,350	+				-0.6
1,796,350	+				-2.2
1,796,350	+				+0.8
1,796,350	+				-0.9
1,796,350	+				-1.5
1,796,350	+				-1.7
1,796,350	+				+0.1
1,796,350	+				-1.5
1,796,350	+				-2.4
1,796,350	+				-0.5
1,796,351	-				-3.1
1,796,351	-				-0.7
1,796,351	-				-2.3
1,796,351	-				-0.5
1,796,351	-				+1.1
1,796,351	-				-0.7
1,796,363	+				-0.5
1,796,439	+				-2.7
1,796,627	-		PfGW456L13_1634	0.19	-0.3
1,796,650	+		PfGW456L13_1634	0.24	-1.5
1,796,650	+		PfGW456L13_1634	0.24	-2.5
1,796,650	+		PfGW456L13_1634	0.24	-1.4
1,796,651	-		PfGW456L13_1634	0.24	-0.1
1,796,651	-		PfGW456L13_1634	0.24	+0.7
1,796,708	+		PfGW456L13_1634	0.37	-1.4
1,796,708	+		PfGW456L13_1634	0.37	+0.2
1,796,708	+		PfGW456L13_1634	0.37	-1.7
1,796,708	+		PfGW456L13_1634	0.37	-1.1
1,796,709	-		PfGW456L13_1634	0.37	+0.0
1,796,709	-		PfGW456L13_1634	0.37	-1.7
1,796,709	-		PfGW456L13_1634	0.37	+0.9
1,796,762	-		PfGW456L13_1634	0.49	-1.9
1,796,835	+		PfGW456L13_1634	0.65	-1.7
1,796,891	+		PfGW456L13_1634	0.78	+1.2
1,796,892	-		PfGW456L13_1634	0.78	+0.5
1,796,939	+		PfGW456L13_1634	0.89	-0.5
1,796,939	+		PfGW456L13_1634	0.89	-0.8
1,796,939	+		PfGW456L13_1634	0.89	-0.5
1,796,956	+				-0.3
1,796,957	-				-1.1
1,796,957	-				+0.1
1,796,960	-				-1.0
1,797,061	+				-1.2
1,797,061	+				+0.2
1,797,061	+				+0.4
1,797,062	-				-2.7
1,797,062	-				-0.9
1,797,062	-				+0.9
1,797,064	+				-3.1
1,797,064	+				-0.6
1,797,065	-				-0.6
1,797,091	+				-0.4
1,797,091	+				-3.2
1,797,092	-				+0.9
1,797,092	-				+0.9
1,797,163	+		PfGW456L13_1635	0.14	-2.5
1,797,163	+		PfGW456L13_1635	0.14	+1.5
1,797,164	-		PfGW456L13_1635	0.14	-2.7
1,797,164	-		PfGW456L13_1635	0.14	-0.6
1,797,164	-		PfGW456L13_1635	0.14	-1.3
1,797,164	-		PfGW456L13_1635	0.14	+1.1
1,797,202	+		PfGW456L13_1635	0.18	+0.1
1,797,202	+		PfGW456L13_1635	0.18	+0.5
1,797,202	+		PfGW456L13_1635	0.18	-2.2
1,797,203	-		PfGW456L13_1635	0.18	-3.0
1,797,203	-		PfGW456L13_1635	0.18	-0.9
1,797,203	-		PfGW456L13_1635	0.18	+0.5
1,797,284	-		PfGW456L13_1635	0.24	-2.3
1,797,284	-		PfGW456L13_1635	0.24	-1.5
1,797,311	-		PfGW456L13_1635	0.27	-1.3
1,797,319	+		PfGW456L13_1635	0.27	+0.4
1,797,319	+		PfGW456L13_1635	0.27	+0.4
1,797,364	+		PfGW456L13_1635	0.31	-1.2
1,797,365	-		PfGW456L13_1635	0.31	-1.3
1,797,365	-		PfGW456L13_1635	0.31	-1.7
1,797,365	-		PfGW456L13_1635	0.31	-1.2
1,797,365	-		PfGW456L13_1635	0.31	-0.8
1,797,365	-		PfGW456L13_1635	0.31	+1.0
1,797,425	-		PfGW456L13_1635	0.36	-1.8
1,797,425	-		PfGW456L13_1635	0.36	-0.3
1,797,425	-		PfGW456L13_1635	0.36	-0.4
1,797,508	+		PfGW456L13_1635	0.43	-0.7
1,797,509	-		PfGW456L13_1635	0.43	+0.8
1,797,587	+		PfGW456L13_1635	0.49	-0.8
1,797,703	+		PfGW456L13_1635	0.59	-0.0
1,797,703	+		PfGW456L13_1635	0.59	-3.9
1,797,706	+		PfGW456L13_1635	0.59	-0.7
1,797,706	+		PfGW456L13_1635	0.59	-0.7
1,797,706	+		PfGW456L13_1635	0.59	-0.4
1,797,706	+		PfGW456L13_1635	0.59	-2.6
1,797,706	+		PfGW456L13_1635	0.59	-1.6
1,797,707	-		PfGW456L13_1635	0.59	-1.1
1,797,707	-		PfGW456L13_1635	0.59	-0.4
1,797,720	+		PfGW456L13_1635	0.60	+1.1
1,797,791	-		PfGW456L13_1635	0.66	-0.5
1,797,862	+		PfGW456L13_1635	0.72	-1.3
1,797,863	-		PfGW456L13_1635	0.72	-0.1
1,797,877	+		PfGW456L13_1635	0.73	-1.3
1,797,995	-		PfGW456L13_1635	0.83	+0.3
1,798,110	+				-3.3
1,798,111	-				-3.3
1,798,111	-				-0.8
1,798,121	-				-2.1
1,798,121	-				+2.0
1,798,129	+				-2.3
1,798,130	-				-3.5
1,798,151	-				-0.7
1,798,210	+				-1.2
1,798,219	+				-0.6
1,798,219	+				-0.5
1,798,334	+		PfGW456L13_1636	0.17	-0.9
1,798,334	+		PfGW456L13_1636	0.17	-2.9
1,798,347	+		PfGW456L13_1636	0.19	-0.4
1,798,348	-		PfGW456L13_1636	0.19	-1.7
1,798,348	-		PfGW456L13_1636	0.19	-2.8
1,798,348	-		PfGW456L13_1636	0.19	-2.7
1,798,383	+		PfGW456L13_1636	0.23	-1.2
1,798,570	-		PfGW456L13_1636	0.47	+0.8
1,798,570	-		PfGW456L13_1636	0.47	-0.1
1,798,590	+		PfGW456L13_1636	0.50	-2.6
1,798,590	+		PfGW456L13_1636	0.50	-0.1
1,798,591	-		PfGW456L13_1636	0.50	-1.2
1,798,652	+		PfGW456L13_1636	0.58	-0.1
1,798,731	+		PfGW456L13_1636	0.68	-1.9
1,798,731	+		PfGW456L13_1636	0.68	-1.5
1,798,731	+		PfGW456L13_1636	0.68	-0.5
1,798,731	+		PfGW456L13_1636	0.68	-0.5
1,798,732	-		PfGW456L13_1636	0.68	+0.9
1,798,732	-		PfGW456L13_1636	0.68	-0.6
1,798,860	+		PfGW456L13_1636	0.84	-2.1
1,798,901	+		PfGW456L13_1636	0.90	-0.8
1,798,902	-		PfGW456L13_1636	0.90	-2.5
1,798,902	-		PfGW456L13_1636	0.90	-0.7
1,798,902	-		PfGW456L13_1636	0.90	+1.2
1,798,905	+				+0.4
1,798,905	+				-2.1
1,798,905	+				+1.1
1,798,905	+				+1.1
1,798,905	+				-3.6
1,798,905	+				-0.0
1,798,905	+				-0.3
1,798,905	+				-0.8
1,798,905	+				-0.4
1,798,905	+				-2.5
1,798,905	+				-0.4
1,798,905	+				+0.6
1,798,905	+				-1.5
1,798,906	-				+1.9
1,798,906	-				-0.2
1,798,906	-				-0.5
1,798,906	-				+0.7
1,798,906	-				+0.4
1,798,906	-				+0.7
1,798,906	-				-0.6
1,798,906	-				+0.0
1,798,908	-				+0.4
1,798,909	+				-0.0
1,798,909	+				-0.3
1,798,909	+				-1.2
1,798,909	+				+0.3
1,798,909	+				+0.8
1,798,909	+				-1.1
1,798,909	+				-0.9
1,798,909	+				-1.6
1,798,909	+				-0.8
1,798,909	+				-0.9
1,798,909	+				-0.3
1,798,910	-				-0.1
1,798,910	-				+0.7
1,798,910	-				-1.6
1,798,910	-				-1.1
1,798,910	-				-1.5
1,798,910	-				+1.0
1,798,910	-				+0.2
1,798,917	+				-1.1
1,798,962	+				-2.4
1,798,983	+				-0.6
1,798,984	-				-0.4
1,798,996	+				-0.4
1,798,996	+				-0.2
1,798,996	+				+0.1
1,798,996	+				-1.2
1,798,997	-				-0.4
1,799,039	+				+0.1
1,799,039	+				-0.3
1,799,039	+				-1.1
1,799,039	+				+0.0
1,799,039	+				+0.7
1,799,106	+				+0.4
1,799,113	+				-1.2
1,799,113	+				-0.7
1,799,181	+				+2.2