Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1043

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
1,154,436	+				-0.6
1,154,436	+				-2.4
1,154,460	+				+0.3
1,154,460	+				-0.6
1,154,460	+				-3.4
1,154,461	-				-2.5
1,154,461	-				+2.0
1,154,491	+				+0.0
1,154,491	+				-0.6
1,154,491	+				+0.3
1,154,491	+				-3.1
1,154,492	-				+0.1
1,154,492	-				-0.2
1,154,492	-				-0.2
1,154,492	-				-1.2
1,154,492	-				+0.4
1,154,492	-				+0.5
1,154,492	-				-3.6
1,154,492	-				-1.9
1,154,492	-				+0.5
1,154,492	-				-0.4
1,154,492	-				+1.0
1,154,492	-				-0.7
1,154,492	-				-1.1
1,154,618	+		PfGW456L13_1042	0.17	+0.1
1,154,618	+		PfGW456L13_1042	0.17	+0.7
1,154,618	+		PfGW456L13_1042	0.17	+0.5
1,154,618	+		PfGW456L13_1042	0.17	+1.2
1,154,619	-		PfGW456L13_1042	0.17	-1.0
1,154,619	-		PfGW456L13_1042	0.17	-0.3
1,154,651	+		PfGW456L13_1042	0.21	+0.4
1,154,726	+		PfGW456L13_1042	0.29	-0.3
1,154,727	-		PfGW456L13_1042	0.29	+2.4
1,154,727	-		PfGW456L13_1042	0.29	-0.1
1,154,727	-		PfGW456L13_1042	0.29	+2.6
1,154,727	-		PfGW456L13_1042	0.29	-0.7
1,154,727	-		PfGW456L13_1042	0.29	+0.7
1,154,727	-		PfGW456L13_1042	0.29	-0.8
1,154,841	-		PfGW456L13_1042	0.42	+0.7
1,154,852	+		PfGW456L13_1042	0.43	-0.5
1,154,852	+		PfGW456L13_1042	0.43	+0.7
1,154,852	+		PfGW456L13_1042	0.43	+0.6
1,154,852	+		PfGW456L13_1042	0.43	+0.7
1,154,852	+		PfGW456L13_1042	0.43	+2.9
1,154,852	+		PfGW456L13_1042	0.43	+0.5
1,154,852	+		PfGW456L13_1042	0.43	+0.6
1,154,852	+		PfGW456L13_1042	0.43	+0.6
1,154,852	+		PfGW456L13_1042	0.43	-0.6
1,154,853	-		PfGW456L13_1042	0.43	-0.4
1,154,853	-		PfGW456L13_1042	0.43	+1.2
1,154,853	-		PfGW456L13_1042	0.43	-1.2
1,154,853	-		PfGW456L13_1042	0.43	-1.9
1,154,853	-		PfGW456L13_1042	0.43	+0.1
1,154,853	-		PfGW456L13_1042	0.43	-0.2
1,154,853	-		PfGW456L13_1042	0.43	-1.1
1,154,969	+		PfGW456L13_1042	0.56	+0.8
1,154,970	-		PfGW456L13_1042	0.56	+0.7
1,155,065	+		PfGW456L13_1042	0.66	-2.9
1,155,065	+		PfGW456L13_1042	0.66	-0.6
1,155,065	+		PfGW456L13_1042	0.66	-1.0
1,155,065	+		PfGW456L13_1042	0.66	-0.1
1,155,065	+		PfGW456L13_1042	0.66	-2.8
1,155,065	+		PfGW456L13_1042	0.66	-0.4
1,155,066	-		PfGW456L13_1042	0.67	-0.0
1,155,066	-		PfGW456L13_1042	0.67	+1.1
1,155,066	-		PfGW456L13_1042	0.67	+0.7
1,155,066	-		PfGW456L13_1042	0.67	-0.2
1,155,158	+		PfGW456L13_1042	0.77	-0.8
1,155,158	+		PfGW456L13_1042	0.77	+0.1
1,155,158	+		PfGW456L13_1042	0.77	+0.3
1,155,158	+		PfGW456L13_1042	0.77	-2.4
1,155,158	+		PfGW456L13_1042	0.77	+1.0
1,155,159	-		PfGW456L13_1042	0.77	+0.5
1,155,159	-		PfGW456L13_1042	0.77	-2.5
1,155,159	-		PfGW456L13_1042	0.77	+0.2
1,155,159	-		PfGW456L13_1042	0.77	+1.3
1,155,159	-		PfGW456L13_1042	0.77	-0.6
1,155,159	-		PfGW456L13_1042	0.77	+1.1
1,155,159	-		PfGW456L13_1042	0.77	+0.7
1,155,227	+		PfGW456L13_1042	0.84	-0.7
1,155,228	-		PfGW456L13_1042	0.84	+0.1
1,155,254	+		PfGW456L13_1042	0.87	+0.7
1,155,254	+		PfGW456L13_1042	0.87	+2.6
1,155,254	+		PfGW456L13_1042	0.87	-1.5
1,155,254	+		PfGW456L13_1042	0.87	-1.1
1,155,254	+		PfGW456L13_1042	0.87	-2.0
1,155,255	-		PfGW456L13_1042	0.87	-0.1
1,155,255	-		PfGW456L13_1042	0.87	+3.0
1,155,255	-		PfGW456L13_1042	0.87	-2.2
1,155,255	-		PfGW456L13_1042	0.87	+0.8
1,155,365	+				-0.2
1,155,365	+				-0.6
1,155,366	-				+0.0
1,155,370	+				-0.3
1,156,012	+		PfGW456L13_1043	0.89	-1.8
1,156,012	+		PfGW456L13_1043	0.89	+0.7
1,156,012	+		PfGW456L13_1043	0.89	-0.5
1,156,012	+		PfGW456L13_1043	0.89	-0.8
1,156,012	+		PfGW456L13_1043	0.89	+2.1
1,156,012	+		PfGW456L13_1043	0.89	-0.2
1,156,013	-		PfGW456L13_1043	0.89	+0.5
1,156,013	-		PfGW456L13_1043	0.89	+1.6
1,156,013	-		PfGW456L13_1043	0.89	+0.2
1,156,368	+				-4.5
1,156,368	+				-2.7
1,156,368	+				-4.3
1,156,369	-				-3.6
1,156,369	-				-3.5
1,156,369	-				-2.2
1,156,369	-				-3.3
1,156,369	-				-3.6
1,156,369	-				-3.7
1,156,369	-				-5.6
1,156,369	-				-2.8
1,156,384	-		PfGW456L13_1044	0.10	-4.1
1,156,384	-		PfGW456L13_1044	0.10	-1.5
1,156,384	-		PfGW456L13_1044	0.10	-5.2
1,156,384	-		PfGW456L13_1044	0.10	-5.2
1,156,384	-		PfGW456L13_1044	0.10	-2.9
1,156,384	-		PfGW456L13_1044	0.10	-0.3
1,156,410	-		PfGW456L13_1044	0.12	-2.9
1,156,576	+		PfGW456L13_1044	0.24	-1.7
1,156,577	-		PfGW456L13_1044	0.24	-4.3
1,156,577	-		PfGW456L13_1044	0.24	-4.1
1,156,680	+		PfGW456L13_1044	0.31	-3.3
1,156,680	+		PfGW456L13_1044	0.31	-2.7
1,156,680	+		PfGW456L13_1044	0.31	-4.2
1,156,680	+		PfGW456L13_1044	0.31	-4.7
1,156,681	-		PfGW456L13_1044	0.31	-3.2
1,156,681	-		PfGW456L13_1044	0.31	-4.0
1,156,681	-		PfGW456L13_1044	0.31	-4.6
1,156,681	-		PfGW456L13_1044	0.31	-2.8
1,156,725	+				-0.5
1,156,725	+		PfGW456L13_1044	0.35	-2.8
1,156,725	+		PfGW456L13_1044	0.35	-4.1
1,156,725	+		PfGW456L13_1044	0.35	-2.4
1,156,726	-		PfGW456L13_1044	0.35	-3.8
1,156,726	-		PfGW456L13_1044	0.35	-0.3
1,156,726	-		PfGW456L13_1044	0.35	-3.4
1,156,737	+		PfGW456L13_1044	0.35	-3.0
1,156,737	+		PfGW456L13_1044	0.35	-3.6
1,156,738	-		PfGW456L13_1044	0.36	-3.7
1,156,738	-		PfGW456L13_1044	0.36	-3.3
1,156,738	-		PfGW456L13_1044	0.36	-4.1
1,156,776	+		PfGW456L13_1044	0.38	-3.0
1,156,776	+		PfGW456L13_1044	0.38	-3.0
1,156,935	+		PfGW456L13_1044	0.50	-3.1
1,156,947	+		PfGW456L13_1044	0.50	-1.3
1,156,948	-		PfGW456L13_1044	0.50	-4.0
1,156,948	-		PfGW456L13_1044	0.50	-2.3