Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_04640 and OH686_04645 are separated by 75 nucleotides OH686_04645 and OH686_04650 overlap by 4 nucleotides OH686_04650 and OH686_04655 are separated by 3 nucleotides OH686_04655 and OH686_04660 are separated by 8 nucleotides
OH686_04640: OH686_04640 - hypothetical protein, at 962,422 to 962,625
_04640
OH686_04645: OH686_04645 - hypothetical protein, at 962,701 to 963,048
_04645
OH686_04650: OH686_04650 - probable uroporphyrin-III c-methyltransferase , at 963,045 to 963,434
_04650
OH686_04655: OH686_04655 - hypothetical protein, at 963,438 to 963,764
_04655
OH686_04660: OH686_04660 - hypothetical protein, at 963,773 to 965,143
_04660
Position (kb) 963
964 Strain fitness (log2 ratio) -2
-1
0
1 at 962.480 kb on + strand, within OH686_04640 at 962.481 kb on - strand, within OH686_04640 at 962.525 kb on + strand, within OH686_04640 at 962.525 kb on + strand, within OH686_04640 at 962.526 kb on - strand, within OH686_04640 at 962.536 kb on + strand, within OH686_04640 at 962.626 kb on + strand at 962.627 kb on - strand at 962.662 kb on + strand at 962.662 kb on + strand at 962.662 kb on + strand at 962.662 kb on + strand at 962.663 kb on - strand at 962.663 kb on - strand at 962.663 kb on - strand at 962.663 kb on - strand at 962.663 kb on - strand at 962.671 kb on + strand at 962.671 kb on + strand at 962.671 kb on + strand at 962.671 kb on + strand at 962.671 kb on + strand at 962.671 kb on + strand at 962.671 kb on + strand at 962.671 kb on + strand at 962.671 kb on + strand at 962.671 kb on + strand at 962.672 kb on - strand at 962.672 kb on - strand at 962.672 kb on - strand at 962.706 kb on + strand at 962.707 kb on - strand at 962.707 kb on - strand at 962.707 kb on - strand at 962.707 kb on - strand at 962.707 kb on - strand at 962.723 kb on + strand at 962.723 kb on + strand at 962.724 kb on - strand at 962.724 kb on - strand at 962.724 kb on - strand at 962.724 kb on - strand at 962.724 kb on - strand at 962.724 kb on - strand at 962.724 kb on - strand at 962.752 kb on + strand, within OH686_04645 at 962.752 kb on + strand, within OH686_04645 at 962.753 kb on - strand, within OH686_04645 at 962.785 kb on + strand, within OH686_04645 at 962.785 kb on + strand, within OH686_04645 at 962.786 kb on - strand, within OH686_04645 at 962.786 kb on - strand, within OH686_04645 at 962.786 kb on - strand, within OH686_04645 at 962.788 kb on + strand, within OH686_04645 at 962.788 kb on + strand, within OH686_04645 at 962.788 kb on + strand, within OH686_04645 at 962.788 kb on + strand, within OH686_04645 at 962.788 kb on + strand, within OH686_04645 at 962.788 kb on + strand, within OH686_04645 at 962.788 kb on + strand, within OH686_04645 at 962.788 kb on + strand, within OH686_04645 at 962.788 kb on + strand, within OH686_04645 at 962.789 kb on - strand, within OH686_04645 at 962.789 kb on - strand, within OH686_04645 at 962.789 kb on - strand, within OH686_04645 at 962.789 kb on - strand, within OH686_04645 at 962.791 kb on + strand, within OH686_04645 at 962.791 kb on + strand, within OH686_04645 at 962.791 kb on + strand, within OH686_04645 at 962.792 kb on - strand, within OH686_04645 at 962.792 kb on - strand, within OH686_04645 at 962.792 kb on - strand, within OH686_04645 at 962.792 kb on - strand, within OH686_04645 at 962.792 kb on - strand, within OH686_04645 at 962.857 kb on + strand, within OH686_04645 at 962.897 kb on + strand, within OH686_04645 at 962.898 kb on - strand, within OH686_04645 at 962.936 kb on + strand, within OH686_04645 at 962.937 kb on - strand, within OH686_04645 at 962.953 kb on + strand, within OH686_04645 at 962.954 kb on - strand, within OH686_04645 at 962.954 kb on - strand, within OH686_04645 at 962.954 kb on - strand, within OH686_04645 at 962.995 kb on + strand, within OH686_04645 at 962.995 kb on + strand, within OH686_04645 at 962.996 kb on - strand, within OH686_04645 at 962.996 kb on - strand, within OH686_04645 at 962.996 kb on - strand, within OH686_04645 at 963.046 kb on + strand at 963.046 kb on + strand at 963.046 kb on + strand at 963.046 kb on + strand at 963.047 kb on - strand at 963.047 kb on - strand at 963.047 kb on - strand at 963.047 kb on - strand at 963.056 kb on - strand at 963.170 kb on + strand, within OH686_04650 at 963.412 kb on + strand at 963.412 kb on + strand at 963.412 kb on + strand at 963.413 kb on - strand at 963.413 kb on - strand at 963.413 kb on - strand at 963.439 kb on + strand at 963.769 kb on + strand at 963.769 kb on + strand at 963.769 kb on + strand at 963.769 kb on + strand at 963.769 kb on + strand at 963.769 kb on + strand at 963.769 kb on + strand at 963.769 kb on + strand at 963.769 kb on + strand at 963.769 kb on + strand at 963.769 kb on + strand at 963.770 kb on - strand at 963.770 kb on - strand at 963.770 kb on - strand at 963.770 kb on - strand at 963.770 kb on - strand at 963.770 kb on - strand at 963.770 kb on - strand at 963.770 kb on - strand at 963.806 kb on + strand at 963.806 kb on + strand at 963.806 kb on + strand at 963.806 kb on + strand at 963.807 kb on - strand at 963.807 kb on - strand at 963.915 kb on + strand, within OH686_04660 at 963.915 kb on + strand, within OH686_04660 at 963.915 kb on + strand, within OH686_04660 at 963.916 kb on - strand, within OH686_04660 at 963.916 kb on - strand, within OH686_04660 at 963.916 kb on - strand, within OH686_04660 at 963.940 kb on + strand, within OH686_04660 at 964.361 kb on + strand, within OH686_04660 at 964.361 kb on + strand, within OH686_04660 at 964.361 kb on + strand, within OH686_04660 at 964.361 kb on + strand, within OH686_04660 at 964.361 kb on + strand, within OH686_04660 at 964.361 kb on + strand, within OH686_04660 at 964.362 kb on - strand, within OH686_04660 at 964.362 kb on - strand, within OH686_04660 at 964.362 kb on - strand, within OH686_04660 at 964.362 kb on - strand, within OH686_04660 at 964.362 kb on - strand, within OH686_04660 at 964.362 kb on - strand, within OH686_04660 at 964.362 kb on - strand, within OH686_04660 at 964.362 kb on - strand, within OH686_04660 at 964.362 kb on - strand, within OH686_04660 at 964.362 kb on - strand, within OH686_04660 at 964.362 kb on - strand, within OH686_04660 at 964.362 kb on - strand, within OH686_04660 at 964.468 kb on + strand, within OH686_04660 at 964.468 kb on + strand, within OH686_04660 at 964.468 kb on + strand, within OH686_04660 at 964.468 kb on + strand, within OH686_04660 at 964.651 kb on + strand, within OH686_04660 at 964.652 kb on - strand, within OH686_04660 at 964.652 kb on - strand, within OH686_04660 at 964.652 kb on - strand, within OH686_04660
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 962,480 + OH686_04640 0.28 +0.4 962,481 - OH686_04640 0.29 -2.0 962,525 + OH686_04640 0.50 -0.8 962,525 + OH686_04640 0.50 +1.5 962,526 - OH686_04640 0.51 +0.0 962,536 + OH686_04640 0.56 +0.8 962,626 + -1.1 962,627 - -0.1 962,662 + -0.3 962,662 + -0.1 962,662 + +0.3 962,662 + -0.1 962,663 - -0.0 962,663 - -0.6 962,663 - -0.2 962,663 - -0.1 962,663 - +0.7 962,671 + -0.0 962,671 + -1.2 962,671 + +0.2 962,671 + +0.3 962,671 + +0.3 962,671 + -0.2 962,671 + -0.2 962,671 + -0.9 962,671 + +0.3 962,671 + -0.1 962,672 - -0.2 962,672 - -0.1 962,672 - -1.3 962,706 + -0.1 962,707 - +0.0 962,707 - +0.2 962,707 - -0.6 962,707 - -0.7 962,707 - +0.1 962,723 + +0.9 962,723 + -0.2 962,724 - +0.1 962,724 - +0.7 962,724 - +0.7 962,724 - -0.0 962,724 - -0.5 962,724 - -1.0 962,724 - +0.1 962,752 + OH686_04645 0.15 +0.7 962,752 + OH686_04645 0.15 -0.2 962,753 - OH686_04645 0.15 -0.5 962,785 + OH686_04645 0.24 +0.2 962,785 + OH686_04645 0.24 +0.3 962,786 - OH686_04645 0.24 -1.2 962,786 - OH686_04645 0.24 +0.6 962,786 - OH686_04645 0.24 +0.1 962,788 + OH686_04645 0.25 -0.4 962,788 + OH686_04645 0.25 -0.3 962,788 + OH686_04645 0.25 +0.1 962,788 + OH686_04645 0.25 -1.2 962,788 + OH686_04645 0.25 -0.5 962,788 + OH686_04645 0.25 -0.5 962,788 + OH686_04645 0.25 +0.6 962,788 + OH686_04645 0.25 +0.5 962,788 + OH686_04645 0.25 -0.8 962,789 - OH686_04645 0.25 +1.5 962,789 - OH686_04645 0.25 +0.9 962,789 - OH686_04645 0.25 +0.5 962,789 - OH686_04645 0.25 -0.7 962,791 + OH686_04645 0.26 -0.4 962,791 + OH686_04645 0.26 -0.5 962,791 + OH686_04645 0.26 +0.4 962,792 - OH686_04645 0.26 -0.3 962,792 - OH686_04645 0.26 +0.7 962,792 - OH686_04645 0.26 -0.6 962,792 - OH686_04645 0.26 +0.8 962,792 - OH686_04645 0.26 +0.0 962,857 + OH686_04645 0.45 -0.9 962,897 + OH686_04645 0.56 -0.5 962,898 - OH686_04645 0.57 +0.4 962,936 + OH686_04645 0.68 -0.7 962,937 - OH686_04645 0.68 -0.5 962,953 + OH686_04645 0.72 -0.1 962,954 - OH686_04645 0.73 -1.0 962,954 - OH686_04645 0.73 -1.6 962,954 - OH686_04645 0.73 +0.0 962,995 + OH686_04645 0.84 +1.3 962,995 + OH686_04645 0.84 +0.3 962,996 - OH686_04645 0.85 +0.2 962,996 - OH686_04645 0.85 +0.3 962,996 - OH686_04645 0.85 +0.8 963,046 + +0.7 963,046 + +0.8 963,046 + -0.5 963,046 + +0.5 963,047 - -0.7 963,047 - +0.3 963,047 - +0.1 963,047 - +0.7 963,056 - +0.4 963,170 + OH686_04650 0.32 +0.3 963,412 + -0.7 963,412 + +0.4 963,412 + +0.6 963,413 - -0.1 963,413 - -0.4 963,413 - -0.5 963,439 + +0.1 963,769 + -0.0 963,769 + -1.6 963,769 + +0.7 963,769 + -1.4 963,769 + +0.0 963,769 + +0.5 963,769 + -0.3 963,769 + +0.0 963,769 + +0.1 963,769 + -0.1 963,769 + -0.2 963,770 - +0.4 963,770 - +0.6 963,770 - -1.0 963,770 - -0.4 963,770 - -0.7 963,770 - -0.4 963,770 - +0.8 963,770 - +0.4 963,806 + -0.8 963,806 + -0.3 963,806 + -0.8 963,806 + +0.8 963,807 - -2.4 963,807 - +1.2 963,915 + OH686_04660 0.10 -0.3 963,915 + OH686_04660 0.10 +0.3 963,915 + OH686_04660 0.10 +0.8 963,916 - OH686_04660 0.10 -0.2 963,916 - OH686_04660 0.10 -0.7 963,916 - OH686_04660 0.10 +0.4 963,940 + OH686_04660 0.12 -0.2 964,361 + OH686_04660 0.43 +0.1 964,361 + OH686_04660 0.43 +0.4 964,361 + OH686_04660 0.43 -0.9 964,361 + OH686_04660 0.43 -1.7 964,361 + OH686_04660 0.43 +0.7 964,361 + OH686_04660 0.43 +0.3 964,362 - OH686_04660 0.43 +0.6 964,362 - OH686_04660 0.43 -0.8 964,362 - OH686_04660 0.43 -0.0 964,362 - OH686_04660 0.43 +0.1 964,362 - OH686_04660 0.43 -1.5 964,362 - OH686_04660 0.43 +0.7 964,362 - OH686_04660 0.43 -0.6 964,362 - OH686_04660 0.43 -0.0 964,362 - OH686_04660 0.43 -0.9 964,362 - OH686_04660 0.43 -0.6 964,362 - OH686_04660 0.43 +0.2 964,362 - OH686_04660 0.43 +0.3 964,468 + OH686_04660 0.51 -1.3 964,468 + OH686_04660 0.51 +0.4 964,468 + OH686_04660 0.51 -0.4 964,468 + OH686_04660 0.51 +1.1 964,651 + OH686_04660 0.64 -1.2 964,652 - OH686_04660 0.64 +1.0 964,652 - OH686_04660 0.64 -1.1 964,652 - OH686_04660 0.64 -0.8
Or see this region's nucleotide sequence