Experiment: Chlorite 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_14945 and PS417_14950 are separated by 5 nucleotides PS417_14950 and PS417_14955 are separated by 152 nucleotides
PS417_14945: PS417_14945 - beta-lactamase, at 3,263,638 to 3,265,452
_14945
PS417_14950: PS417_14950 - structural protein MipA, at 3,265,458 to 3,266,261
_14950
PS417_14955: PS417_14955 - hypothetical protein, at 3,266,414 to 3,270,472
_14955
Position (kb)
3265
3266
3267 Strain fitness (log2 ratio)
-1
0
1
2 at 3264.471 kb on - strand, within PS417_14945 at 3264.488 kb on - strand at 3264.636 kb on + strand, within PS417_14945 at 3264.898 kb on + strand, within PS417_14945 at 3265.065 kb on - strand, within PS417_14945 at 3265.065 kb on - strand, within PS417_14945 at 3265.196 kb on - strand, within PS417_14945 at 3265.309 kb on + strand at 3265.309 kb on + strand at 3265.310 kb on - strand at 3265.310 kb on - strand at 3265.429 kb on - strand at 3265.554 kb on + strand, within PS417_14950 at 3265.840 kb on - strand, within PS417_14950 at 3265.957 kb on - strand, within PS417_14950 at 3266.102 kb on + strand, within PS417_14950 at 3266.251 kb on - strand at 3266.410 kb on - strand at 3266.457 kb on - strand at 3266.457 kb on - strand at 3266.554 kb on + strand at 3266.555 kb on - strand at 3266.557 kb on - strand at 3266.582 kb on + strand at 3266.669 kb on - strand at 3266.669 kb on - strand at 3266.755 kb on - strand at 3267.041 kb on + strand, within PS417_14955 at 3267.042 kb on - strand, within PS417_14955
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 4 mM remove 3,264,471 - PS417_14945 0.46 +0.1 3,264,488 - +2.3 3,264,636 + PS417_14945 0.55 +0.3 3,264,898 + PS417_14945 0.69 +0.4 3,265,065 - PS417_14945 0.79 -0.0 3,265,065 - PS417_14945 0.79 +0.1 3,265,196 - PS417_14945 0.86 +0.5 3,265,309 + +0.3 3,265,309 + -0.1 3,265,310 - -0.3 3,265,310 - -0.2 3,265,429 - -0.4 3,265,554 + PS417_14950 0.12 -1.1 3,265,840 - PS417_14950 0.48 -0.5 3,265,957 - PS417_14950 0.62 +0.1 3,266,102 + PS417_14950 0.80 -0.7 3,266,251 - -0.2 3,266,410 - +0.4 3,266,457 - +0.2 3,266,457 - +0.8 3,266,554 + +0.3 3,266,555 - -0.1 3,266,557 - +0.1 3,266,582 + +0.6 3,266,669 - -0.1 3,266,669 - -0.2 3,266,755 - +0.5 3,267,041 + PS417_14955 0.15 -0.6 3,267,042 - PS417_14955 0.15 +0.1
Or see this region's nucleotide sequence