Experiment: Chlorite 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_09150 and PS417_09155 are separated by 2 nucleotides PS417_09155 and PS417_09160 are separated by 190 nucleotides PS417_09160 and PS417_09165 overlap by 4 nucleotides
PS417_09150: PS417_09150 - energy transducer TonB, at 1,989,784 to 1,990,512
_09150
PS417_09155: PS417_09155 - biopolymer transporter ExbD, at 1,990,515 to 1,990,922
_09155
PS417_09160: PS417_09160 - GNAT family acetyltransferase, at 1,991,113 to 1,991,667
_09160
PS417_09165: PS417_09165 - alkaline phosphatase, at 1,991,664 to 1,993,238
_09165
Position (kb)
1991
1992 Strain fitness (log2 ratio)
-1
0
1 at 1990.504 kb on + strand at 1990.508 kb on + strand at 1990.508 kb on + strand at 1990.508 kb on + strand at 1990.508 kb on + strand at 1990.509 kb on - strand at 1990.509 kb on - strand at 1990.523 kb on + strand at 1990.523 kb on + strand at 1990.830 kb on + strand, within PS417_09155 at 1990.990 kb on - strand at 1991.223 kb on + strand, within PS417_09160 at 1991.223 kb on + strand, within PS417_09160 at 1991.249 kb on - strand, within PS417_09160 at 1991.249 kb on - strand, within PS417_09160 at 1991.658 kb on - strand at 1991.769 kb on + strand at 1992.019 kb on - strand at 1992.213 kb on + strand, within PS417_09165 at 1992.213 kb on + strand, within PS417_09165 at 1992.213 kb on + strand, within PS417_09165 at 1992.213 kb on + strand, within PS417_09165 at 1992.226 kb on - strand, within PS417_09165 at 1992.313 kb on - strand, within PS417_09165 at 1992.396 kb on + strand, within PS417_09165 at 1992.396 kb on + strand, within PS417_09165 at 1992.397 kb on - strand, within PS417_09165 at 1992.397 kb on - strand, within PS417_09165 at 1992.474 kb on + strand, within PS417_09165 at 1992.475 kb on - strand, within PS417_09165 at 1992.478 kb on - strand, within PS417_09165 at 1992.486 kb on - strand at 1992.486 kb on - strand, within PS417_09165 at 1992.486 kb on - strand, within PS417_09165 at 1992.641 kb on + strand, within PS417_09165 at 1992.641 kb on + strand, within PS417_09165 at 1992.642 kb on - strand, within PS417_09165
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 4 mM remove 1,990,504 + -1.1 1,990,508 + +0.5 1,990,508 + +0.3 1,990,508 + -0.2 1,990,508 + +0.9 1,990,509 - +0.3 1,990,509 - -0.9 1,990,523 + -0.1 1,990,523 + -0.4 1,990,830 + PS417_09155 0.77 +0.8 1,990,990 - +1.0 1,991,223 + PS417_09160 0.20 -0.8 1,991,223 + PS417_09160 0.20 -0.0 1,991,249 - PS417_09160 0.25 +0.0 1,991,249 - PS417_09160 0.25 +1.1 1,991,658 - +0.1 1,991,769 + +1.3 1,992,019 - +1.6 1,992,213 + PS417_09165 0.35 -0.4 1,992,213 + PS417_09165 0.35 -0.1 1,992,213 + PS417_09165 0.35 +0.1 1,992,213 + PS417_09165 0.35 -0.2 1,992,226 - PS417_09165 0.36 -1.7 1,992,313 - PS417_09165 0.41 +0.4 1,992,396 + PS417_09165 0.46 -0.1 1,992,396 + PS417_09165 0.46 -0.2 1,992,397 - PS417_09165 0.47 +0.7 1,992,397 - PS417_09165 0.47 -0.4 1,992,474 + PS417_09165 0.51 +0.0 1,992,475 - PS417_09165 0.51 -1.0 1,992,478 - PS417_09165 0.52 +0.2 1,992,486 - -0.3 1,992,486 - PS417_09165 0.52 -0.5 1,992,486 - PS417_09165 0.52 -0.1 1,992,641 + PS417_09165 0.62 +0.1 1,992,641 + PS417_09165 0.62 -0.2 1,992,642 - PS417_09165 0.62 +0.0
Or see this region's nucleotide sequence