Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03738

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,906,521	+				+0.0
3,906,529	-				-1.0
3,906,545	+				+0.0
3,906,560	+				+0.5
3,906,560	+				-0.7
3,906,577	-				-0.0
3,906,628	+				-0.6
3,906,824	+		CCNA_03736	0.61	-0.2
3,906,913	+		CCNA_03736	0.90	-0.7
3,906,979	-		CCNA_03737	0.14	-1.1
3,906,998	-		CCNA_03737	0.20	-1.2
3,907,046	-		CCNA_03737	0.36	+0.3
3,907,046	-		CCNA_03737	0.36	-0.3
3,907,188	+		CCNA_03737	0.84	+0.0
3,907,188	+		CCNA_03737	0.84	+1.1
3,907,196	-		CCNA_03737	0.87	-0.3
3,907,221	+				+1.3
3,907,378	-				+0.7
3,907,378	-				-1.5
3,907,384	+				+0.3
3,907,389	+				+0.3
3,907,408	+				-1.9
3,907,416	-				+2.4
3,907,416	-				-1.2
3,907,435	-				-0.4
3,907,463	-				-0.2
3,907,473	+				+0.1
3,907,484	+				+0.0
3,907,484	+				+0.1
3,907,514	-				-0.1
3,907,523	-				+0.2
3,907,525	+				+0.7
3,907,530	+				+0.0
3,907,530	+				-0.3
3,907,530	+				-0.7
3,907,531	-				+0.4
3,907,538	-				-1.5
3,907,560	+				+0.2
3,907,568	-				+0.5
3,907,573	-				-1.4
3,907,577	+				-1.9
3,907,577	+				-0.7
3,907,580	+				+1.3
3,907,585	-				-1.5
3,907,585	-				-0.6
3,907,585	-				+0.1
3,907,585	-				-1.7
3,907,585	-				-1.4
3,907,607	-		CCNA_03738	0.11	+2.7
3,907,607	-		CCNA_03738	0.11	-0.5
3,907,625	+		CCNA_03738	0.12	+0.5
3,907,643	-		CCNA_03738	0.13	+1.1
3,907,643	-		CCNA_03738	0.13	+0.4
3,907,653	-		CCNA_03738	0.14	+1.3
3,907,677	+		CCNA_03738	0.15	+1.6
3,907,685	-		CCNA_03738	0.15	+0.0
3,907,686	+		CCNA_03738	0.15	-0.2
3,907,694	-		CCNA_03738	0.16	+0.1
3,907,730	-		CCNA_03738	0.18	+0.6
3,907,765	+		CCNA_03738	0.20	-2.6
3,907,765	-		CCNA_03738	0.20	+0.5
3,907,782	+		CCNA_03738	0.21	+0.3
3,907,811	-		CCNA_03738	0.22	-0.2
3,907,858	-		CCNA_03738	0.25	-1.9
3,907,905	+		CCNA_03738	0.28	+0.1
3,907,905	+		CCNA_03738	0.28	-0.2
3,907,918	-		CCNA_03738	0.28	-0.4
3,907,918	-		CCNA_03738	0.28	+0.1
3,907,924	+		CCNA_03738	0.29	-1.6
3,907,943	-		CCNA_03738	0.30	+0.7
3,908,091	-		CCNA_03738	0.38	-0.7
3,908,135	+		CCNA_03738	0.41	-0.5
3,908,148	+		CCNA_03738	0.41	-0.1
3,908,156	-		CCNA_03738	0.42	+1.4
3,908,158	+		CCNA_03738	0.42	-0.9
3,908,158	+		CCNA_03738	0.42	+0.2
3,908,158	+		CCNA_03738	0.42	-0.7
3,908,174	-		CCNA_03738	0.43	-1.0
3,908,177	+		CCNA_03738	0.43	-0.2
3,908,190	-		CCNA_03738	0.44	-0.7
3,908,211	-		CCNA_03738	0.45	+0.1
3,908,221	-		CCNA_03738	0.45	+0.6
3,908,233	+		CCNA_03738	0.46	+1.3
3,908,440	-		CCNA_03738	0.58	-1.0
3,908,504	+		CCNA_03738	0.61	-1.0
3,908,534	-		CCNA_03738	0.63	-0.8
3,908,535	+		CCNA_03738	0.63	+0.5
3,908,535	+		CCNA_03738	0.63	-1.1
3,908,543	-		CCNA_03738	0.63	+0.0
3,908,621	+		CCNA_03738	0.68	-0.0
3,908,629	-		CCNA_03738	0.68	-0.1
3,908,634	-		CCNA_03738	0.68	-0.3
3,908,634	-		CCNA_03738	0.68	-0.4
3,908,634	-		CCNA_03738	0.68	-0.8
3,908,645	-		CCNA_03738	0.69	-0.6
3,908,681	-		CCNA_03738	0.71	+0.4
3,908,696	+		CCNA_03738	0.72	-0.2
3,908,700	-		CCNA_03738	0.72	+1.0
3,908,704	-		CCNA_03738	0.72	-0.9
3,908,711	+		CCNA_03738	0.73	+0.3
3,908,889	-		CCNA_03738	0.83	+1.9
3,908,925	+		CCNA_03738	0.85	-0.4
3,908,925	+		CCNA_03738	0.85	+0.3
3,908,933	-		CCNA_03738	0.85	+1.1
3,908,959	+		CCNA_03738	0.87	-0.0
3,908,971	+		CCNA_03738	0.87	+0.2
3,909,116	+				+0.5
3,909,124	-				-0.7
3,909,128	+				-2.9
3,909,128	+				-2.7
3,909,134	+				-0.2
3,909,146	+				-1.9
3,909,163	-				-0.4
3,909,188	-				+0.2
3,909,244	-		CCNA_03739	0.25	-0.0
3,909,279	+		CCNA_03739	0.32	-0.1
3,909,315	+		CCNA_03739	0.40	-0.7
3,909,323	-		CCNA_03739	0.42	-0.1
3,909,323	-		CCNA_03739	0.42	+0.3
3,909,323	-		CCNA_03739	0.42	+0.1
3,909,323	-		CCNA_03739	0.42	+0.2
3,909,360	+		CCNA_03739	0.50	-1.1
3,909,366	+		CCNA_03739	0.52	-0.0
3,909,371	+		CCNA_03739	0.53	+0.0
3,909,392	+		CCNA_03739	0.57	+0.8
3,909,405	-		CCNA_03739	0.60	+0.6
3,909,459	-		CCNA_03739	0.72	-0.4
3,909,479	+		CCNA_03739	0.76	-0.4
3,909,486	+		CCNA_03739	0.78	+0.6
3,909,494	-		CCNA_03739	0.80	-0.4
3,909,511	+		CCNA_03739	0.83	-2.1
3,909,519	-		CCNA_03739	0.85	-0.1
3,909,519	-		CCNA_03739	0.85	-1.1
3,909,519	-		CCNA_03739	0.85	+0.3
3,909,566	-				+0.4
3,909,569	+				+0.3
3,909,610	-				+0.2
3,909,610	-				+0.3
3,909,610	-				+0.8
3,909,610	-				+0.8
3,909,612	+				-0.5
3,909,658	-				+0.2
3,909,701	-				-0.2
3,909,724	-		CCNA_03740	0.12	+0.0
3,909,866	-		CCNA_03740	0.26	+1.7
3,909,915	+		CCNA_03740	0.31	-2.5
3,909,938	-		CCNA_03740	0.34	+0.4
3,909,951	-		CCNA_03740	0.35	+0.3
3,909,966	-		CCNA_03740	0.37	-0.7
3,910,128	+		CCNA_03740	0.53	-1.4
3,910,171	-		CCNA_03740	0.57	+1.5
3,910,172	-		CCNA_03740	0.57	+0.4
3,910,195	+		CCNA_03740	0.60	+0.5