Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03727

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,894,695	+		CCNA_03726	0.29	+0.5
3,894,703	-		CCNA_03726	0.30	-1.0
3,894,834	+		CCNA_03726	0.41	+2.3
3,894,842	-		CCNA_03726	0.42	+1.2
3,894,909	-		CCNA_03726	0.47	+0.8
3,894,939	-		CCNA_03726	0.50	-1.5
3,894,982	-		CCNA_03726	0.54	+0.0
3,894,982	-		CCNA_03726	0.54	-1.0
3,894,982	-		CCNA_03726	0.54	-0.8
3,895,017	-		CCNA_03726	0.57	-0.7
3,895,018	-		CCNA_03726	0.57	+1.1
3,895,109	-		CCNA_03726	0.65	-0.2
3,895,193	-		CCNA_03726	0.72	-0.6
3,895,359	-		CCNA_03726	0.86	-1.9
3,895,361	+		CCNA_03726	0.86	+0.0
3,895,369	-		CCNA_03726	0.87	-0.4
3,895,407	+				+0.5
3,895,415	-				+0.2
3,895,415	-				-1.4
3,895,415	-				-1.2
3,895,480	+				+0.5
3,895,505	-				-1.0
3,895,515	-				+0.6
3,895,539	-				+0.5
3,895,602	-				-1.5
3,895,628	+				-0.2
3,895,660	+				+0.5
3,895,662	+				-1.3
3,895,667	+				+0.3
3,895,697	+				+1.7
3,895,705	-				-2.1
3,895,796	-		CCNA_03727	0.14	-0.2
3,895,811	-		CCNA_03727	0.16	+0.0
3,895,873	+		CCNA_03727	0.22	+1.1
3,895,873	+		CCNA_03727	0.22	-1.0
3,895,873	+		CCNA_03727	0.22	-0.9
3,895,881	-		CCNA_03727	0.23	-0.5
3,895,881	-		CCNA_03727	0.23	-1.0
3,895,884	+		CCNA_03727	0.23	-2.2
3,895,892	-		CCNA_03727	0.24	-0.6
3,895,892	-		CCNA_03727	0.24	-2.9
3,895,905	+		CCNA_03727	0.25	-0.9
3,896,025	-		CCNA_03727	0.37	-1.2
3,896,025	-		CCNA_03727	0.37	-1.7
3,896,072	+		CCNA_03727	0.42	+0.7
3,896,128	-		CCNA_03727	0.48	+1.0
3,896,174	+		CCNA_03727	0.52	-0.2
3,896,202	+		CCNA_03727	0.55	-0.2
3,896,210	-		CCNA_03727	0.56	+0.2
3,896,212	-		CCNA_03727	0.56	+0.6
3,896,225	-		CCNA_03727	0.58	+0.0
3,896,225	-		CCNA_03727	0.58	+0.7
3,896,225	-		CCNA_03727	0.58	-0.9
3,896,233	-		CCNA_03727	0.58	-0.5
3,896,235	-		CCNA_03727	0.59	-0.3
3,896,261	+		CCNA_03727	0.61	-0.1
3,896,261	+		CCNA_03727	0.61	-2.4
3,896,261	+		CCNA_03727	0.61	-0.5
3,896,261	+		CCNA_03727	0.61	-0.1
3,896,261	+		CCNA_03727	0.61	-1.0
3,896,261	+		CCNA_03727	0.61	+0.4
3,896,261	+		CCNA_03727	0.61	-0.1
3,896,261	+		CCNA_03727	0.61	+0.0
3,896,261	+		CCNA_03727	0.61	-0.4
3,896,261	+		CCNA_03727	0.61	+0.8
3,896,269	-		CCNA_03727	0.62	-0.2
3,896,269	-		CCNA_03727	0.62	+0.3
3,896,269	-		CCNA_03727	0.62	+0.8
3,896,269	-		CCNA_03727	0.62	+0.5
3,896,297	+		CCNA_03727	0.65	-0.2
3,896,297	+		CCNA_03727	0.65	+0.8
3,896,297	+		CCNA_03727	0.65	-1.2
3,896,297	+		CCNA_03727	0.65	+0.9
3,896,305	-		CCNA_03727	0.66	-0.2
3,896,305	-		CCNA_03727	0.66	-0.5
3,896,305	-		CCNA_03727	0.66	-0.3
3,896,305	-		CCNA_03727	0.66	+0.7
3,896,327	-		CCNA_03727	0.68	+0.6
3,896,340	+		CCNA_03727	0.69	+1.3
3,896,340	+		CCNA_03727	0.69	-0.2
3,896,348	-		CCNA_03727	0.70	-2.2
3,896,378	+		CCNA_03727	0.73	-0.7
3,896,378	+		CCNA_03727	0.73	+0.3
3,896,378	+		CCNA_03727	0.73	-0.3
3,896,385	+		CCNA_03727	0.74	+0.3
3,896,386	-		CCNA_03727	0.74	+0.0
3,896,416	-		CCNA_03727	0.77	+0.2
3,896,437	-		CCNA_03727	0.79	-1.1
3,896,438	+		CCNA_03727	0.79	+1.2
3,896,443	+		CCNA_03727	0.80	-0.1
3,896,446	-		CCNA_03727	0.80	+0.8
3,896,446	-		CCNA_03727	0.80	+0.9
3,896,481	+		CCNA_03727	0.84	+0.7
3,896,563	+				+0.6
3,896,570	-				+0.1
3,896,577	+				+0.5
3,896,582	+				-0.2
3,896,590	-				-1.3
3,896,590	-				+0.2
3,896,590	-				+0.5
3,896,590	-				-2.0
3,896,590	-				+0.3
3,896,590	-				-0.2
3,896,590	-				+1.8
3,896,667	-				-0.1
3,896,772	+				+0.7
3,896,792	+		CCNA_03728	0.13	+0.1
3,896,792	+		CCNA_03728	0.13	-0.4
3,896,800	-		CCNA_03728	0.16	-0.3
3,896,800	-		CCNA_03728	0.16	-0.2
3,896,845	+		CCNA_03728	0.34	+1.6
3,896,853	-		CCNA_03728	0.37	-0.1
3,896,870	-		CCNA_03728	0.44	-0.2
3,896,872	+		CCNA_03728	0.45	+0.9
3,896,914	+		CCNA_03728	0.62	+0.4
3,896,950	-		CCNA_03728	0.77	-0.1
3,897,011	-				-0.1
3,897,017	-				-1.8
3,897,017	-				+0.5
3,897,021	+				+0.7
3,897,033	+				-0.9
3,897,033	+				+0.8
3,897,033	+				+0.2
3,897,033	+				+0.5
3,897,033	+				-0.2
3,897,033	+				-0.4
3,897,041	-				-0.2
3,897,041	-				+0.1
3,897,041	-				+0.8
3,897,041	-				-0.6
3,897,041	-				-0.3
3,897,041	-				+1.1
3,897,115	+				+0.0
3,897,142	+				+1.1
3,897,157	-				-0.1
3,897,171	-				+0.5