Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03610

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,763,384	+		CCNA_03609	0.54	+0.3
3,763,392	-		CCNA_03609	0.55	-2.0
3,763,392	-		CCNA_03609	0.55	-1.8
3,763,392	-		CCNA_03609	0.55	-1.7
3,763,432	-		CCNA_03609	0.58	-0.6
3,763,449	+		CCNA_03609	0.60	+0.1
3,763,576	-		CCNA_03609	0.70	-2.4
3,763,615	-		CCNA_03609	0.74	-1.7
3,763,637	+		CCNA_03609	0.75	-1.6
3,763,645	-		CCNA_03609	0.76	-1.0
3,763,652	+		CCNA_03609	0.77	+0.9
3,763,660	-		CCNA_03609	0.77	-2.0
3,763,660	-		CCNA_03609	0.77	-2.5
3,763,660	-		CCNA_03609	0.77	-2.7
3,763,731	+		CCNA_03609	0.83	+0.1
3,763,734	-		CCNA_03609	0.83	+0.1
3,763,755	+		CCNA_03609	0.85	-1.6
3,763,763	-		CCNA_03609	0.86	-3.1
3,763,805	+		CCNA_03609	0.89	-0.8
3,763,825	+				+0.3
3,763,833	-				+1.2
3,763,833	-				-1.6
3,763,847	-				-1.2
3,763,869	-				+0.5
3,763,905	-				-1.6
3,763,919	+				+0.9
3,763,947	+				-0.7
3,763,947	+				+0.6
3,763,950	-				+0.6
3,763,992	-				-1.2
3,764,074	-				-1.2
3,764,106	+				-1.9
3,764,127	-				+0.3
3,764,176	+				+1.3
3,764,176	+				-1.2
3,764,184	-				-2.8
3,764,184	-				-0.2
3,764,184	-				+0.3
3,764,225	-				+1.7
3,764,225	-				+0.4
3,764,242	+				-1.1
3,764,252	-				+1.2
3,764,252	-				+0.9
3,764,268	+				+0.1
3,764,271	+				+0.9
3,764,276	+				-0.2
3,764,276	+				-1.4
3,764,276	-				-0.4
3,764,279	-				-0.5
3,764,331	+				+0.1
3,764,331	+				-0.5
3,764,331	+				-0.1
3,764,332	+				-1.2
3,764,339	-				+0.9
3,764,339	-				-0.1
3,764,340	-				-0.2
3,764,340	-				+0.2
3,764,340	-				+0.6
3,764,355	-				+0.0
3,764,383	-				+1.1
3,764,383	-				-1.4
3,764,385	+				-0.7
3,764,385	+				+1.6
3,764,405	+				+0.6
3,764,409	+				-0.3
3,764,432	-		CCNA_03610	0.12	+0.9
3,764,462	+		CCNA_03610	0.15	+0.2
3,764,467	+		CCNA_03610	0.16	-0.0
3,764,470	-		CCNA_03610	0.16	+0.3
3,764,470	-		CCNA_03610	0.16	+0.2
3,764,470	-		CCNA_03610	0.16	+0.3
3,764,490	+		CCNA_03610	0.19	+1.4
3,764,497	+		CCNA_03610	0.20	-0.4
3,764,497	+		CCNA_03610	0.20	+0.6
3,764,497	-		CCNA_03610	0.20	-0.4
3,764,497	-		CCNA_03610	0.20	+1.0
3,764,497	-		CCNA_03610	0.20	-0.5
3,764,499	-		CCNA_03610	0.20	-0.7
3,764,505	-		CCNA_03610	0.21	-0.7
3,764,517	+		CCNA_03610	0.22	+0.3
3,764,522	+		CCNA_03610	0.23	-2.6
3,764,530	-		CCNA_03610	0.24	-1.2
3,764,530	-		CCNA_03610	0.24	+0.2
3,764,531	-		CCNA_03610	0.24	-0.9
3,764,551	+		CCNA_03610	0.26	+1.8
3,764,589	-		CCNA_03610	0.31	-0.5
3,764,638	-		CCNA_03610	0.37	-0.7
3,764,658	-		CCNA_03610	0.39	-1.7
3,764,682	-		CCNA_03610	0.42	+2.1
3,764,682	-		CCNA_03610	0.42	-0.3
3,764,692	+		CCNA_03610	0.43	-0.9
3,764,699	+		CCNA_03610	0.44	-0.9
3,764,707	-		CCNA_03610	0.45	-0.3
3,764,707	-		CCNA_03610	0.45	+0.3
3,764,707	-		CCNA_03610	0.45	-0.8
3,764,707	-		CCNA_03610	0.45	+1.5
3,764,707	-		CCNA_03610	0.45	-1.6
3,764,707	-		CCNA_03610	0.45	-0.2
3,764,718	+		CCNA_03610	0.46	-1.1
3,764,718	+		CCNA_03610	0.46	+1.2
3,764,732	-		CCNA_03610	0.48	+0.5
3,764,750	-		CCNA_03610	0.50	-0.3
3,764,754	+		CCNA_03610	0.51	-0.3
3,764,755	-		CCNA_03610	0.51	+1.0
3,764,757	-		CCNA_03610	0.51	+0.1
3,764,763	+		CCNA_03610	0.52	-1.7
3,764,785	+		CCNA_03610	0.54	+0.0
3,764,828	-		CCNA_03610	0.59	+0.6
3,764,846	-		CCNA_03610	0.62	-0.4
3,764,856	+		CCNA_03610	0.63	+0.3
3,764,869	-		CCNA_03610	0.64	-0.6
3,764,883	-		CCNA_03610	0.66	+0.6
3,764,885	-		CCNA_03610	0.66	+0.1
3,764,886	+		CCNA_03610	0.66	-0.8
3,764,911	+		CCNA_03610	0.69	-1.6
3,764,919	-		CCNA_03610	0.70	-0.9
3,764,921	-		CCNA_03610	0.71	-0.5
3,764,941	-		CCNA_03610	0.73	+0.2
3,765,012	+		CCNA_03610	0.82	-0.1
3,765,048	+		CCNA_03610	0.86	+1.6
3,765,056	-		CCNA_03610	0.87	+1.7
3,765,092	-				+1.2
3,765,101	+				-3.8
3,765,114	-				+0.3
3,765,200	+				-0.6
3,765,200	+				+0.7
3,765,208	-				-0.3
3,765,212	+				-2.5
3,765,279	-				-0.8
3,765,283	+				+2.3
3,765,341	+				-0.8
3,765,351	+				-0.8
3,765,351	+				+1.3
3,765,351	+				+1.1
3,765,361	+				-0.4
3,765,361	+				+0.2
3,765,369	-				+0.9
3,765,369	-				+0.5
3,765,369	-				-1.7
3,765,369	-				+1.4
3,765,369	-				-1.0
3,765,369	-				-1.2
3,765,369	-				-0.9
3,765,370	-				-1.0
3,765,494	-		CCNA_03611	0.16	+1.3
3,765,494	-		CCNA_03611	0.16	-0.4
3,765,498	+		CCNA_03611	0.16	+0.5
3,765,508	+		CCNA_03611	0.17	-0.6
3,765,508	+		CCNA_03611	0.17	-0.3
3,765,508	+		CCNA_03611	0.17	+0.3
3,765,516	-		CCNA_03611	0.17	-1.4
3,765,516	-		CCNA_03611	0.17	-0.3
3,765,516	-		CCNA_03611	0.17	+0.2
3,765,516	-		CCNA_03611	0.17	-0.4
3,765,548	+		CCNA_03611	0.19	+0.2
3,765,620	+		CCNA_03611	0.23	-0.1
3,765,625	+		CCNA_03611	0.23	-0.8
3,765,625	+		CCNA_03611	0.23	+0.8
3,765,685	-		CCNA_03611	0.26	-0.0
3,765,704	+		CCNA_03611	0.28	-0.5
3,765,735	-		CCNA_03611	0.29	+0.2
3,765,735	-		CCNA_03611	0.29	-1.1
3,765,742	+		CCNA_03611	0.30	+0.5
3,765,750	-		CCNA_03611	0.30	-0.5
3,765,845	+		CCNA_03611	0.35	-0.4
3,765,858	+		CCNA_03611	0.36	+1.5
3,765,868	+		CCNA_03611	0.37	+1.7
3,765,878	+		CCNA_03611	0.37	-1.1
3,765,878	+		CCNA_03611	0.37	-0.5
3,765,886	-		CCNA_03611	0.38	-0.2
3,765,886	-		CCNA_03611	0.38	-1.1
3,765,930	+		CCNA_03611	0.40	+0.5
3,765,940	-		CCNA_03611	0.41	+0.8
3,765,971	+		CCNA_03611	0.42	-1.6
3,765,971	+		CCNA_03611	0.42	-0.9
3,766,000	+		CCNA_03611	0.44	-0.4
3,766,006	-		CCNA_03611	0.44	-0.1
3,766,023	+		CCNA_03611	0.45	-0.4
3,766,031	-		CCNA_03611	0.46	+0.3
3,766,041	-		CCNA_03611	0.46	-0.2
3,766,043	+		CCNA_03611	0.46	+0.4
3,766,043	+		CCNA_03611	0.46	-0.9
3,766,051	-		CCNA_03611	0.47	+0.4
3,766,051	-		CCNA_03611	0.47	-0.9
3,766,066	-		CCNA_03611	0.48	+0.0
3,766,075	+		CCNA_03611	0.48	-0.7
3,766,116	-		CCNA_03611	0.50	-0.3
3,766,116	-		CCNA_03611	0.50	-1.3
3,766,131	+		CCNA_03611	0.51	-0.7
3,766,155	+		CCNA_03611	0.53	-1.2
3,766,155	+		CCNA_03611	0.53	+1.5
3,766,155	+		CCNA_03611	0.53	-0.4
3,766,155	+		CCNA_03611	0.53	-1.9
3,766,155	+		CCNA_03611	0.53	-2.5
3,766,163	-		CCNA_03611	0.53	+0.9
3,766,163	-		CCNA_03611	0.53	-2.1
3,766,163	-		CCNA_03611	0.53	-0.7